KEGG   Pangasianodon hypophthalmus (striped catfish): 113543307
Entry
113543307         CDS       T05759                                 
Symbol
helq
Name
(RefSeq) helicase POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:phyp03400]
    113543307 (helq)
Enzymes [BR:phyp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     113543307 (helq)
DNA repair and recombination proteins [BR:phyp03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    113543307 (helq)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII DUF7898 HHH_5 DNA_pol_lambd_f DUF4332
Other DBs
NCBI-GeneID: 113543307
NCBI-ProteinID: XP_026797213
LinkDB
Position
Unknown
AA seq 998 aa
MSREAEIQSEIVVKRSSWSKKRNRDGMRSDLTPAKKRLSAEKCKTTEPRNITQISTEDTV
TQECCSDSEDLFDGYDSIIADTSFLAKLEDVEQDQAPQTTKSTVDHLADFTDDFYDTSLR
DLPSSQLAFQQDVQNKLHPIHTGGTGNTSTPDVKRSKQSVCDDQNKPTSKARRSMADQLK
RAMLENAASSNTVSKMVLQKEAAVSEEISAAVQTIKSVTTEGDLGPFFGLPSKVKDLIMR
LKRIEDLYEWQKACLNLDSVLQRKNLIYSLPTSGGKTLVAEILIFKEILCRKKDALLILP
YVSLVQEKVRGLASFGIELDFLVEEYAGSKGKFPPVKRRTKKSLYITTIEKGHSLVNSLI
ETKRLDDIGLVVVDELHMLGDGSRGAILEMTLAKVLYISKGTQIIGMSATLGNVADLLTF
LRAENYTNDFRPVQLNEYVKLRDSIYEVVPKEEQCFRFSRLLKLNYSSGMQKMDTDHIIA
LVTEVIPRQSCLIFCATKKNCENVAVMICKYLNKNFLKHKEEEKVTLLSELRNSGNGSLC
PVLQKTVPFGLAYHHSGLTSDERKLLEEAYSSGVLCLLACTSTLAAGINLPARRVILRSP
YVGADFLKRSQYKQMVGRAGRAGIDSMGESILILQDKDRDRVKQLVCAPVENCYSNLLHD
GSCGLLSLILSLIGLDITCTAEQVLEFMSRTLLSVQETRLCQQKSLRELVVESIEILKQK
GLINTSAHEQSVLHVTKLGRATYKGSVDLRHSDVLYRDLSKGLEGLLLNSFLHLVYLVTP
YDIMSQIKPDWMIYFSQLTKLSAAEQKMAAAIGVPESFLVRKAAGQSVRKSIDPAVVNRL
YLALVLYSLLKETNVWNVSERFQLTRGLIQTLVSSASAFCSCVLHFTEELEEFWAYKALL
TELTRRLTYCVQAELIPLMEVAGVMEFRAKQLYNAGYKTLAHLANADPNVLVKTVENLYK
RQANQIVASAKMLLQEKAEALQEEVDELLMFPTDLPSA
NT seq 2997 nt   +upstreamnt  +downstreamnt
atgagtagagaagcagaaatccagagtgaaatagttgtaaaacgcagctcctggtccaaa
aagagaaacagagatggaatgaggagtgatttaactccggctaagaagcggctcagcgct
gagaaatgcaaaacaactgaacccagaaatataacacagatcagcacagaggatacagtg
acacaggagtgctgcagtgacagtgaggatctctttgatggctacgacagcatcatcgct
gacacgtccttcctcgctaagctggaagatgttgaacaggaccaagcaccacaaaccacc
aaaagcactgttgatcatctagcagacttcacggatgatttctatgatacatcactgagg
gatttacccagctctcagctcgcgtttcagcaagacgtgcaaaacaaattgcaccccatc
cacacaggaggaactgggaacacgtctactcctgatgtgaaacgctcgaagcagtctgtc
tgcgatgatcagaacaaacctaccagcaaggccaggagaagcatggctgaccagctgaag
agggccatgctggaaaacgcagcttcttccaacaccgtttcgaagatggttctgcagaaa
gaggcagcagtgagcgaagaaatcagcgctgctgtgcagaccatcaagtctgtgacaaca
gaaggagacctgggtcctttctttgggcttccatccaaagttaaggatttgatcatgaga
ctgaagaggattgaggacttgtatgagtggcagaaggcgtgtctgaatttggactcggtt
ctccagagaaagaatctgatctactctttaccgacgagcggagggaagacgttggtggct
gagattcttatttttaaagagattctctgtaggaagaaagacgcactgctgatattacca
tatgtatccctggtgcaagaaaaggttcgtggcttggcgagttttggtattgagctggac
ttcttggtagaggagtacgctgggagtaaaggaaaattccctcctgtaaaacgacgaacc
aagaagtcgctttacatcaccacgatcgagaaaggccacagcctagtgaactcactgatc
gagacaaagcgactggacgacatcggcctggtggtggtagatgagctccacatgcttgga
gacggcagcagaggagcgattctcgagatgactctggccaaagtactgtacatcagcaaa
ggcacgcagataatcggaatgagtgcaaccttgggcaacgtagctgatctcctgaccttc
ctgagggctgagaactacaccaatgacttcagacctgtccagctgaatgagtatgtgaaa
ctgagagacagtatatatgaagtcgttccgaaggaggagcagtgcttccggttttcacgt
ttgctgaagttgaattattccagtgggatgcagaagatggatacagaccacatcattgct
ctggttactgaagtgataccgcggcagtcctgtttgatattctgtgccaccaagaagaac
tgtgaaaatgtagctgtaatgatctgcaagtatctgaataaaaacttcctgaagcacaaa
gaggaggagaaggtgactctgttatccgagctgaggaacagcggaaacggctcgctgtgt
cctgtgctgcagaagaccgtgcccttcggcctggcgtatcaccacagcggtctgaccagt
gatgagaggaagctgctggaggaggcgtactcatccggagtgctctgtctcctcgcctgc
acctccaccctggctgcaggcatcaacctccctgcccgcagggtgattctccgctccccg
tatgtgggcgcagacttcttaaagaggagtcagtacaagcagatggtgggaagagcgggc
cgtgctgggattgattcaatgggcgagagcatcctcatcctgcaggacaaagacagagac
agggtcaaacaactggtgtgtgcaccagtggagaactgttacagcaacctgctgcatgat
gggagttgcggtcttctgagtctcatcctctccctcatcggccttgatataacatgcact
gcggagcaggtcctggagttcatgtccaggacattactcagcgtccaggagactcggctt
tgtcagcagaagagtcttcgtgagcttgtagtggagtcgatagagatactgaaacagaag
ggtctcatcaacacttctgcacacgagcaatctgtgctgcatgtcaccaaacttggaaga
gcaacatataaaggctcagtagatctgagacactccgatgtcctctacagagacctgtcc
aaaggtctggagggtctgctgctgaacagtttcctgcatttagtgtatctggtcactcca
tatgacatcatgtcccagatcaaaccagactggatgatctacttcagccagttaacaaag
ttgtctgccgctgaacagaagatggcagccgctattggagtgcccgagagcttcctcgtt
cggaaagcagcggggcagagtgtgaggaagagtatagaccctgctgtggtgaacagactg
tacctggctctggtgctttattctctgctgaaggagacaaacgtatggaacgtgtctgaa
agattccagctgacacgaggtctcattcagaccctcgtcagttccgcctcagccttctgc
tcctgcgtgctgcatttcactgaggagttggaggagttttgggcctataaagctctcctc
actgagctgacccgcagactgacctactgcgtacaggccgagctcattccactgatggag
gtcgccggagtcatggagttccgagccaagcagctgtacaatgctgggtataaaacgctg
gctcatctggccaatgctgacccgaatgtgctggtgaaaactgtggagaatctctataag
agacaggctaatcagattgtggcctcagcaaaaatgctgttacaggagaaagcagaagcc
ctgcaggaggaagtcgacgagctgcttatgtttcccactgacctcccgtctgcctaa

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