Pangasianodon hypophthalmus (striped catfish): 113543438
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Entry
113543438 CDS
T05759
Symbol
nsun5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phyp03009
]
113543438 (nsun5)
Enzymes [BR:
phyp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
113543438 (nsun5)
Ribosome biogenesis [BR:
phyp03009
]
Eukaryotic type
Other ribosome biogenesis factors
113543438 (nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NSUN5_N
NSUN5_fdxn-like
Methyltr_RsmB-F
FtsJ
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
113543438
NCBI-ProteinID:
XP_026797394
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MALYMKAAEILDKVEQKKGAVKTLVYDSKFQNIKQLFALVCETQKYSPVLQEIIENTRLL
KETKLRHNLAKVLVYDLLIGQGIKCGGSWKAMMLKHRSRLQAALARIKVKRKVSRNQDLL
PPSAQHNNGVDIPRYVRVNTLKTTVEDVIDYLKREGFSYQGAASQLEDLCSLSGKTFMSD
LHLQDLLVFSAKMDFHDHYLYKAGHIILQDKASCLPAYLLDPPVGGHVIDACAAPGNKTS
HLAAIMKNKGKLFAFDIDTKRLSTMSTLLLRAGVTCHQLANEDFLKVDPLSPAYRDVTHI
LLDPSCSGSGMVCLHDGSSEEQEHDPERLKALAAFQLRCLNHALKFPKLQHLVYSTCSIH
PQENEEVVSACLENNPDFRLIHLFPEWPERGRDPLTQCLRASTTKTFTHGFFVAMLERQA
TPNSESLDEQPPSISEPSAGEEEQVEVSVDEQFQPPAAKKRRNRKKPKKQKS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcactttatatgaaagcagcagagattctcgataaagtggagcaaaagaagggagct
gtgaaaactctggtctacgacagtaaattccagaatataaagcagctctttgccctcgtc
tgtgagactcagaaatattccccagtgcttcaggagatcatcgagaacaccaggcttctg
aaagaaaccaaactccgacataatttagcgaaggttctggtttatgacttgctcattggc
caaggcataaaatgtggtggaagctggaaggcaatgatgttgaaacatcgctccagacta
caagctgctttggctagaattaaagtcaagcggaaagtcagtcgaaatcaggacctgctt
cctcccagcgcgcagcataacaacggtgtagatattccacgttacgtgcgtgttaacacg
ttgaaaacaactgtggaggatgtcattgactacctgaagagagagggattttcatatcaa
ggagcagcaagccagcttgaggatttatgctctctctcggggaagacttttatgagtgat
cttcatctccaagatcttctggttttcagtgcgaaaatggacttccatgatcattacctg
tataaagcagggcacattatcttgcaagacaaggccagctgtctccctgcgtacctcctg
gaccccccagttggaggccatgtgattgatgcttgtgcagctcctggaaataaaaccagc
catctggcagccatcatgaaaaataaaggcaagctgtttgccttcgacattgatacgaag
cgcctgtccaccatgagcactctcctccttcgtgctggagtcacatgtcatcagttggct
aatgaggattttctgaaggtggatccactttccccagcatacagggacgtgacgcacatc
cttcttgatccatcatgcagtggttcaggaatggtgtgtctgcatgatggtagctcagaa
gaacaggagcatgaccctgagcgtctgaaggcactagctgcatttcagctgcgctgcctg
aaccacgcactgaagttcccaaagctccagcacctcgtctactccacctgctccatccat
ccacaggagaatgaggaggtcgtgtctgcttgtcttgagaataatcctgattttagacta
attcatctttttcctgagtggcctgagcggggtcgtgacccactgacgcagtgtctcaga
gccagcactacaaaaaccttcacccacggtttctttgtggccatgctggaaaggcaagct
actccaaacagtgaaagccttgatgaacagcctccttccataagtgagccttctgctggt
gaagaggagcaagtggaggtatctgtggacgaacaatttcaacctcctgcagcaaagaaa
agaaggaatagaaagaaacccaaaaagcagaagtcctaa
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