Pangasianodon hypophthalmus (striped catfish): 113543509
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Entry
113543509 CDS
T05759
Name
(RefSeq) neurobeachin-like isoform X1
KO
K24183
neurobeachin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113543509
Membrane trafficking [BR:
phyp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
113543509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
Neurobeachin
Laminin_G_3
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_WDHD1_1st
Beta-prop_WDR75_1st
PIGA
NUC153
Motif
Other DBs
NCBI-GeneID:
113543509
NCBI-ProteinID:
XP_026797559
LinkDB
All DBs
Position
Unknown
AA seq
2918 aa
AA seq
DB search
MASDKPLPAPLAEREAAAGGDAMVSGSGSVVLPAGVINPAVPIRNIRMKFAVLIGLIQVG
EVSNRDIVETVLNLLVGGEFDLEMNFIIQDAESITCMVELLEHCEVTCQAEIWSMFTAIL
RKSVRNLQTCTEVGLIQQVLQKMSSVDDMIADLLVDMLGVLASYSITVKELKLLFSMLRG
DNGIWPRHAIKLLSVLNQMPQRHGPDTFFNFPGRSAAAIALPPIAKWPYQNGFTLNTWFR
MDPLNNINVDKDKPYLYCFRTSKGIGYSAHFVGNCLIVTSLKSKGKGFQHCVKYDFQPRK
WYMISIVHIYNRWRNSEIRCYVNGQLVSYGDMAWHVNTNDSYDKCFLGSSETADANRVFC
GQLGAVYVFSEALNPAQIFAIHQLGPGYKSTFKFKSESDIHLAEHHKQVLYDGKLASSIA
FTYNAKATDAQLCLESSPRENASIFVHSPHALMLQDVKAIVTHSIHSAIHSIGGIQVLFP
LFSQLDYRQPNDSPVETTVCATLLAFLVELLKSSVAMQEQMLGGKGFLVIGYLLEKSSRV
HITRAVLEQFLSFAKYLDGLTHGAPLLKQLCDHVLFNAAIWIHTPAKVQLSLYTYLSAEF
IGTATIYSTIRRVGTVLQLMHTLKYYYWATNPLESSGITPKGLDGPRPTQKEIISLRAFM
LLFLKQLILKDRGVKEDELQSILNYLLTMHEDENIHDVLQLLVALMSEHPASMIPAFDQR
NGIRVIYKLLASKSESIRVQALKVLGYFLKHLGHKRKVEIMHTHSLFTLLGERLMMHTNT
VTVTTYNTLYEILTEQVCTQVVHKPHPEPDSTVKIQNPMILKVVATLLKNSTPSAELMEV
RRLFLSDMIKLFSNSRENRRCLLQCSVWQDWMFSLGYINPKNPEEQKITEMVYNIFRILL
YHAIKYEWGGWRVWVDTLSIAHSKVTYEAHKEYLAKMYEEYQRQEEENMKKGKKGSVSTI
SGLSAQPASVNGTLETRETDDTSQTHTPESEAEYTESSEPQNLLTDTKEQVHVHELLVDI
KAEKVEATEVKLDDLDLSPEALGGGGGGMENGPLVEVDSLLDAAYCVHKLNGGLTPKEEE
EPVMGTGTSEDDANLAPLITLDDEKDIAPSNNGFLFPKSEEKLLPSLATPEPLPLSGPEQ
VPAAPTVPTSVPVSSASDDLSLLAHMTSCGSELAPDDDSFKLQSPLADISTLAEGSESGI
GEAGTVKSGDAISTVSDTERSDDGKDKEMKKIQTTATTQALHGRSGSQMERDLRVDLGFR
GMPMTEEQRRQFSPGPRTTMFRIPEFKWSPMHQRLLTDLLFALETDVHVWRSHSTKSVMD
FVNSNENIIFVHNTIHLISQMVDNIIIACGGILPLLSAATSPSSSKVSANPTELENVEAT
QGMSSETAVTFLSRLMAMVDVLVFASSLNFSEIEAEKNMSSGGLMRQCLRLVCCVAVRNC
LECRQRQRERGNKSSLPISKTQDNLQSTAATSKSAIANVPRNLSPIKDPDRLLQDVDINR
LRAVVFRDVDDSKQAQFLALAVVYFISVLMVSKYRDILEPQREIGRSSSLSGRSIRQEIN
SPTSTENPSSFSDSSRTERPLEDLPLESSLPHTDSGIGEEQVGGTLNGSDLGVVASGVGG
GPDAMSELLCTLSAEVRKSQESLLESPLGADTLKPAASISSISQANKGINVKEILKSLVA
APVEATETGPEPQPYHPDPALKREAAAMLPMQFHSFDRSVVVPVKKPPPGSLAVNTVGTP
TSSAIPSSGSTPNIFAAASATPKSMINTTGATDSASSSSASSSSFVNGATSKNLPAVQTV
APMPEDTVENMSAFCEVDPCPLRSGLTPAELKSFSSLAGFHTAPRDEGQFLSITTKLERA
LEKVAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTGLVCMKSSTSVVELVMLLCSQEWQ
NSIQKNAGLAFIELINEGRLLCHAMKDHIVRVANEAEFILNRQRAEDVHKHAEFESNCAQ
YAADRREEEKMCDHLISAAKHRDHVTANQLKQKILNILTNKHGAWGTMAQSHLLDFWRLD
YWEDDLRRRRRFVRNAFGSTHSDVSLKSLEDYAPEEEEDMKSKKTFRSQSVVSQNPEMEL
MLEGDDDAVSLLQEKEIDNLAGPVVLSTPAQLVAPVVVARGTLSITTTEIYFEVDEEDPA
FKKTDAKVLAYSEGLHGKWMFSEIRAVFARRYLLQNTGLEVFMANRTSVMFNFPDQATVK
KVVYSLPRVGVGTSYGLPQARRISLATPRQLFKSSNMTQRWQRREISNFEYLMFLNTIAG
RTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPIGALNPKRAAFYAERYETWEED
GTPPHHYTSLYSTAASTLLWLHRIEPFTTFYLNGNDNKFDHPDRTFSGIMRSWRSCQRDT
SDVKELIPEFYYLPEMFVNSNGYDLGLREDHSPVSDVELPAWAKKPEDFVRINRMALESE
FVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYMSYEGSVNLDTITDLQLRESMEAQIQIF
GQVPSQLLIEPHPPRSSAMHLCFLPQSPLMFKDQMQQDVIMVLKFPSNSPVTHVAANTLP
HLSMPAAVTVTCSRLFAVNRWHNTVGLRGAPGYSLEQAHHLPIEMDPLIANNSGVNKRQI
TDLVDQSIQINTHCFVVTADNRYILVCGFWDKSFRVYSTETGKLTQIVFGHWDVVTCLAR
SESYIGGDCYIVSGSRDATLLLWYWSGRHHIIGDNPNNSDYPAPRAVLTGHDHEVVCVSV
CAELGLVISGAKEGPCLVHTITGDLLRALEGPENCQQPRLISVSSEGHCIIYYERGHFCN
FSINGKLLAQMELSDSTRAVLLSSDGQNLVTGGDNGVVEVWQACDFKQLYIYPGCDAGIR
AMDLSHDQRTLITGMASGSIVAFNIDFNRWHYEHQNRY
NT seq
8757 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgacaagccgcttccggcgccgctggcggagcgagaagccgcggccggcggg
gacgcgatggtgtccggctcgggctccgttgtgctgccggctggcgtcatcaaccccgcg
gttccgatccgcaacatccgcatgaagttcgccgtgctgatcggcctcatccaggtcggc
gaggtcagcaaccgggacatcgtcgagaccgtgctgaatctgcttgtcggtggtgagttt
gacctggagatgaacttcatcatccaggacgcggagagcatcacgtgcatggtggagctc
ctggaacactgcgaagtgacgtgccaggctgagatttggagcatgttcacggccatcttg
cgcaagagcgtgcgcaacctgcaaacctgcaccgaggtgggcctcatacagcaggtgctg
cagaagatgagctccgttgacgacatgatcgcagacctcttggtggatatgctgggggtt
ttggccagctacagtatcacagtgaaagagctgaagctgctgtttagcatgctgagagga
gataatggcatatggccgaggcacgcaatcaagctgctgtctgtcctgaaccagatgcct
cagagacatggcccagataccttcttcaacttcccaggacgcagtgcagcggccattgct
ttgcctcccattgctaagtggccttaccagaacggtttcactctcaacacatggttccgt
atggaccctctgaacaatatcaatgtagacaaggacaaaccctacctatactgtttccga
acgagcaaaggaattggatactctgcccattttgtggggaactgtttgatcgtgacgtcg
ctaaagtccaaaggcaaaggcttccagcactgcgtgaaatacgacttccagcccaggaag
tggtacatgatcagcattgtgcacatctacaaccgctggaggaacagtgaaatccgctgc
tatgtgaatggccagttggtctcttacggcgacatggcctggcacgtcaacaccaatgat
agttatgataaatgtttccttggctcatcggagacggccgatgccaatcgggtcttctgc
ggtcagcttggtgctgtgtatgtgttcagtgaggcacttaacccagcgcagatcttcgcc
attcatcagctgggacccggatacaagagcacctttaagtttaaatcagaaagtgatatc
cacttggctgaacaccataagcaggtgttgtatgatgggaagttggccagcagcatcgcc
ttcacctataacgcgaaggccacagatgcacagctctgcctcgagtcctcacccagagag
aacgcctccatcttcgtccattcacctcacgccctcatgctgcaggacgtaaaggccatc
gtcacccactccatccacagtgccatccactccatcgggggcatccaggtgctcttcccg
ctcttctcccagcttgactaccggcagcccaatgacagcccagtggagaccaccgtgtgt
gccactctcctggctttcctggtggagctgttgaagagttctgtagccatgcaggagcag
atgcttggaggaaagggcttcctggtcattggatacctgttagagaagtcgtcccgtgtg
cacatcaccagggctgtactggagcagttcctctccttcgctaagtatctagatggcctc
acacatggagctcctctcctaaagcagctgtgtgaccacgtcctgttcaacgcagccatc
tggatacacacacctgcaaaggttcagctctctctgtacacttacctgtcagctgagttc
atcggcacggccacaatctactccactatacggcgagtgggaaccgtgctgcagctcatg
cacacactcaagtactactactgggccaccaacccactggagagcagcggcatcacaccc
aaaggccttgacggtccacggcccacacaaaaggagatcatctctctgcgtgccttcatg
ctcctctttctcaagcagctcattctcaaggaccgaggtgtgaaagaggacgaattacag
agcatcctgaactacctgttaaccatgcatgaggatgagaatatccatgatgttctgcag
ctcttggtggctctcatgtctgagcatccagcctccatgatccctgcgtttgaccagagg
aacgggatacgggtcatctataaactcttggcctcgaagagcgagagcattcgtgtacaa
gcactcaaagtcctcggctactttctcaagcacctcggacacaagcggaaagtggagatc
atgcatacacacagcctcttcacactgctgggagagagattaatgatgcacaccaacact
gtgacagtaacaacctacaacacactttatgagattctgacagagcaggtgtgtactcag
gtggttcataaacctcacccagagcctgactccactgtcaagatccagaaccccatgatt
ctgaaggtggtggcgacgctgctgaagaactccacgcccagcgctgagctgatggaggtg
cgccgcctcttcctgtctgacatgatcaagctcttcagcaacagcagagagaacagacgg
tgtttgctgcagtgttcagtgtggcaggactggatgttctccctgggttacattaacccc
aagaaccccgaggaacagaagatcactgagatggtgtacaacattttccgcatcctcctg
taccatgccatcaagtacgaatggggaggctggcgtgtgtgggtggacactctcagcatt
gcccattccaaggtgacatatgaagcgcataaggagtatctagctaagatgtacgaggaa
tatcagcgtcaggaggaggagaacatgaagaaaggtaagaagggctcagtgagcaccatc
tcgggtctgtcagcacagccggcctccgtcaacggcaccctggagacacgcgagacagac
gacacgtctcagacgcatacacccgagagcgaggctgagtacaccgagagcagcgagcca
cagaacctgctcaccgacacaaaggagcaagtccatgtccacgagcttctggtggacatc
aaggctgagaaagtggaggccactgaggtgaaactagatgatctggacctgtctccagag
gccctggggggaggaggaggaggaatggaaaacggcccactggtggaggtggactcactg
ctggacgctgcatactgcgtgcacaagctcaatggagggttgacccccaaggaagaggag
gaaccagtcatggggacaggtacaagcgaagatgacgccaacctggcgcccctgataacg
ctggatgacgagaaggacattgcacctagcaacaatggcttcctctttccaaaaagcgaa
gagaagttgctcccctctctggccacgcctgagccgctgccgctgtccggcccggagcag
gtgcccgctgcacccactgtgcctacctctgtaccggtgtcaagtgccagcgacgacctc
agcctgctggcccacatgacatcgtgcggctctgaactggcacccgatgatgacagcttt
aagctgcagagcccgctggctgacatcagcacactagcagagggcagtgagagtggcata
ggagaggcaggaacagtaaagagcggagacgccatcagcaccgtgtcggacacggagagg
tcagatgacggcaaggacaaagagatgaagaagatccaaacaacagcaaccacacaggcc
ctgcacgggcgttcgggcagtcagatggagcgcgacctgcgggtggatctcggcttcaga
gggatgcccatgaccgaggagcagcggcggcagttcagtcccggaccacgcaccaccatg
ttccgtattccagagttcaaatggtcccccatgcaccagcgcttactcaccgacctgctg
tttgccctcgagacagatgtgcacgtgtggaggagccactcgactaaatcagtcatggac
ttcgtgaacagtaacgagaacattatatttgtacacaacaccatccacctcatttctcag
atggttgataacatcatcatcgcttgtggagggatcctgccactgctctccgctgccact
tcaccttctagttctaaggttagtgcaaaccctacggagctggagaacgtagaggccact
cagggcatgtcgtctgagacggctgtgacgttcctcagcaggttgatggccatggtagat
gtgctggtgttcgccagctctctcaacttcagtgagattgaggctgagaagaacatgtcc
tctggaggcctgatgcggcagtgcctgcgcttagtgtgttgtgttgctgtgaggaactgt
ctggagtgtcggcagaggcagagagagcgaggcaacaagtcttcacttcctatcagcaag
acacaagacaaccttcagagtacagctgccaccagcaagagtgccatagcaaatgtccct
cgtaacctctcacctatcaaggaccctgacagattgctgcaggacgtggacatcaaccgt
ctgagagccgtcgtcttcagagacgtggatgacagtaaacaggctcagttcctggctctg
gctgtagtttacttcatttctgtcctcatggtgtccaaataccgggacatcctggagcct
cagcgggagattggcaggtccagcagcctatcaggaagaagcatacggcaagaaattaat
tcccccactagcacagaaaacccctcctcgttctcagacagcagtcgaactgagcgtcca
ctggaggatctgcccctggagtcctcgctgccccacactgactcaggtatcggggaagag
caggtgggcggcaccctcaatggctctgacctgggagtcgtggcctcaggtgtgggagga
ggtccagacgccatgagtgagctcctgtgcacgctttcagcagaggtgcgcaagtcccaa
gagtctctgctcgagtctccacttggcgcagacacacttaagccagccgcatctatctcc
agcatcagccaggccaacaagggcatcaatgttaaggagatcctcaagagcttggtggca
gcgccagtggaagccactgagacgggtcctgaaccacagccataccatcctgacccggca
ctgaagagagaggcagctgccatgctgcccatgcagttccattcgtttgacaggagcgtg
gttgtaccagtgaagaaacctccacctggcagtttggcagtgaacaccgtgggcacaccc
accagcagtgccatcccctcctctggcagcacaccaaacatctttgctgctgccagtgcc
acacctaagagcatgatcaatacaacaggtgccacagactctgcctcgtcctcctctgcc
tcatcctccagctttgtgaatggtgccaccagtaaaaacctgcctgctgtgcagactgtg
gcgcccatgcccgaggacacagtggagaacatgagtgccttttgtgaggtggacccatgt
ccactgcgaagtgggttgacccctgcagagctcaaatcctttagctcactggcaggattc
cacacagcccccagagatgagggacagtttcttagtataaccactaagttagagcgtgcg
ctggagaaggtggcccccctcttgagggagatctttgtggactttgcacccttcctgtcc
aggaccctgctcggtagccatgggcaggagttgctgattgaaggtacaggtctggtgtgt
atgaagtccagcacatcagtagtggaactggtgatgttactgtgttcacaggagtggcag
aactccattcagaagaatgcaggactcgcttttattgagcttattaatgagggcaggctc
ttgtgccatgccatgaaggatcacatcgtgcgagtggccaatgaggcagagtttatcctc
aacaggcagagggccgaggacgtccacaaacatgcggagtttgagtccaactgtgctcag
tatgccgcagatcggagagaggaagagaagatgtgcgatcatctgatcagtgctgccaag
cacagagatcatgtgaccgccaaccagctgaaacagaagatcctcaacatcttgactaat
aaacatggagcatggggtaccatggcacagagccatttgctggatttctggcgtttggac
tactgggaagatgacctgcgcaggaggcgaagatttgttcgtaatgcatttggctccaca
cactcggatgtgtcactcaaatcactggaggattatgctccagaggaagaggaggacatg
aagtcgaagaagacgttcaggagccaatctgtggtcagtcagaatcctgagatggagctg
atgctggaaggagatgatgatgctgtcagtctgctgcaggagaaggagattgacaatctc
gcaggtcctgtagttctgagcacgccggcccagctggtcgctcctgtggttgttgccagg
gggacgctctccatcaccaccactgagatttactttgaggtggatgaggaagatcccgct
ttcaagaagactgacgcaaaggtgttggcgtattctgaggggctgcatgggaaatggatg
ttcagtgagatcagagccgtgtttgccagacgttacctgttgcagaacaccggtctggag
gtcttcatggccaacagaacatcggtcatgtttaacttcccggaccaggcaactgtcaaa
aaggtggtgtacagtttacctcgagtgggagtcggcaccagctacggccttcctcaagca
agacgaatttctctggccacccctcgacagctcttcaagtcctccaacatgacccagcgc
tggcagaggcgggagatctctaactttgagtacctcatgtttctcaacaccatcgcaggg
agaacatataatgaccttaaccaatacccggtcttcccctgggtcctcactaactacgag
tctgaggagctggacctcactctgcctggcaacttcagggacctgtcaaagccaattggg
gcactgaatccaaagcgtgcagccttttacgctgagcgttatgagacgtgggaggaggat
ggaacacccccacatcactacacatccctctactccaccgctgcttctactctgctctgg
ctccacagaatagagcccttcactacgttctatctgaacggaaatgacaataagtttgac
catccagatcgcacattctccggcatcatgcgctcctggaggagctgccagagggacacg
tctgacgtcaaggagttgatcccagagttctactacctgcctgagatgtttgtgaacagt
aatggttatgatctgggtttgagggaggaccactcgccggtgtctgatgtggagctgcct
gcctgggccaaaaaaccagaagactttgttcgcattaacagaatggctttggagagcgag
tttgtatcatgccagctgcaccagtggatcgatctgatcttcggctacaagcagcgagga
cccgaggcagtgagagctcttaacgtgttccactacatgtcctacgaaggctctgtcaat
ctggacaccatcacagacctgcagctcagagagtccatggaggctcagatccagatattt
ggtcaagttccctcgcagctgttaattgagcctcatcctccccgcagctcggctatgcat
ctgtgtttccttcctcagagtccactcatgtttaaggatcagatgcagcaggacgtgatc
atggtgctgaaatttccctccaactctcctgtgacacacgtggccgccaacacgctgccc
cacctgagcatgcccgctgccgtaacggtcacctgcagccgcctgttcgctgtcaaccgc
tggcacaacaccgttggtctcaggggagccccaggctactcactggaacaggctcatcac
ctcccaatagagatggatcctctgatagccaataactctggggtgaataaacggcagatt
actgacctggttgaccaaagcattcagatcaacacacactgttttgtggtcactgctgac
aatcgctacatcctggtgtgtggcttctgggacaagagtttccgagtctactccacagaa
acgggtaaactgactcagattgtgtttggtcactgggatgtagtgacgtgtttggctcgc
tctgagtcctacattggcggagactgctacatcgtctccggctcacgagatgccacgctg
ctgctgtggtactggagtggacgacatcacatcatcggagacaatcccaacaatagtgat
tatcctgcaccccgggccgttctcacgggtcatgatcatgaggtggtgtgtgtgtctgtg
tgtgctgagctgggactcgtcatcagtggagccaaagagggtccatgcttggtacacacc
atcacaggggatctgctgcgggctctggagggtccggagaactgccagcagccacggctc
atctccgtctccagtgagggtcactgcatcatttactatgagagaggccacttctgcaac
tttagcattaatggcaagcttctcgcacagatggagctcagcgactccacccgggctgtg
ctgctgagcagtgatggacagaatctggtgactggaggagataacggagtggtggaggtg
tggcaggcctgcgactttaagcagctctacatctacccaggctgtgacgcaggcatccgg
gccatggacctctctcatgaccagagaactttaattactggcatggcatcaggcagcatc
gtggcattcaacattgatttcaaccgctggcactatgagcatcagaacagatactga
DBGET
integrated database retrieval system
