Pangasianodon hypophthalmus (striped catfish): 113543526
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Entry
113543526 CDS
T05759
Name
(RefSeq) protocadherin-16-like
KO
K16507
protocadherin-16/23
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113543526
Cell adhesion molecules [BR:
phyp04515
]
Cadherins
Cadherin related
113543526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Fibulin_C
Cadherin_4
CADH_Y-type_LIR
TMEM154
RIFIN
Glrx-like
Big_9
Motif
Other DBs
NCBI-GeneID:
113543526
NCBI-ProteinID:
XP_026797618
LinkDB
All DBs
Position
Unknown
AA seq
3282 aa
AA seq
DB search
MKLFRGSGDNSWRLRMFLLVFLTVGLLTVMVNADATASILELQLDEEQPAGTIVGDISAG
LPPGETASLYFISDHEGTSVGTDLHIDETTGIIKTARRLDREERDHYSFIAVTMTGLTVK
VSITVNDINDHAPMFPKNKAYLKIPEQTAVGTRFSLEPATDADKDQLTTQGYLIKDGNVG
QVFRLETKRAANKVLYLDLVVNGVLDREKRASYSLVLEAFDGGSPKKTGQMTLDVAVQDI
NDHAPVFNQSRYHAIISESLPQGSNILQVFASDADEGDNGLVLYEINRRQSDPDRYFVID
PRSGIITLNKPLDYEVRKVHELVVQAKDNASHPEITNAFVTIHVRDYNDNQPTMTIIFLS
EDGSPRISEGAQPGQYVARISVSDPDYGEYSNVNVSLEGGDGKFALTTKDSIIYLICVDQ
VLDREERDSYDLRVMATDSGTPPLRAESSFTIQVTDINDNPPLFDQQAYKQTIPEVVYPG
SFVLQVTARDKDQGPNGDVRYSILPNKGTHSNWFTIDAVTGIITTATELDYETDPKASVK
VVATDGGKPPLSSTAVVEISLQDINDNKPVFGSSFYNASIKENTAAGTCFLEVTAVDADG
GSFGAITYSIGSGPSSSPPAVFSINKETGHICTSAVLDRDEGSESYHFTVTATDGGGLSS
SAFVNVALLDINDNRPMFYPVSYAVSLSSQSAPGTSVIRVSAHDPDAGENGKVTYRTVPG
GGSNFFTLNKDTGVISLSRSLHGKANSVITMVITALDGGGLTVPINARVNVSVVAGSVAP
PVFEQAQYFFTVPEDVLRGTEVGVVFANGRNGATKDISYTISSGDPEGYFTVDTETGALR
TSLPLDHEAWPSLELEVQARSGSPPVFAQTLVRITITDVNDNAPTFLPSSSESLLLPEAT
KMGTIVYRVKAEDRDSGANGQLSFDLLSSESQRTFSVDRSSGEIRLIGSLSYESAPRYDL
LVLAKDNGAPQLSATFTLVVHVQAENDQGPVFDTMTYRVELKENTPLNTRFLQVRALSRD
HGGNGASSSSSAPLSYHLRPDGDAAGFGIVSDSGWLFVKSALDREAKDIYLLTVLASSGR
GQLKKTGSATVRVSVTDENDNSPRFSQERVFLAVRENLPAGTGFGRVSATDRDAGLNSRL
TYKLLHTDRNFQINSQTGEISTRAALDREHQSSYQLVVVVQDGGTPPRSATGTAHVTVLD
ENDNAPLFSHVLPGRELIIQVQEGLPAGSLLGTLQAKDPDEGENGTIFYSLSGSRAERFS
LNPNTGELRSASTLRRAEKAEYSLTVTVSDRGAPPQSISSVLRIQVAGSVRAPPKPNTLS
MTLNTIEGTKPGSVIGSVHLHDQRDVLLDGQVTYLVVGGTDQDGNFMVERLTGDVYLARE
LDYEMGAHYTLQIEVNDFSKASPSSHVIQLDINVQDSNDHAPQFPEDPVTIVVPENMQLG
SSIYAFQASDKDGSGPNSEVRYSIQHHWPDRSDLLSLDPITGVLTLGQELDHEQTSSLFL
VVRATDSATDPSQRRWSSVTARIFVTDENDNAPVFSSPTAVSVMEDKPMGFVLLYVIARD
ADQGENGRVSYRIQAGNTAGRFSLNPNTGSLSILKALDREEQDSYNLTIVAEDHGTPQHS
TTQVLSVQVIDVNDEAPWFELSEYEVQIRENQPPGTTILTVSATDRDQGANGHVSYGGVT
VEGFVISPETGVISLTKVLDREQQHHYSITVYAKDGGMPPNFAKAKVHITVMDENDNAPA
FGRLQYSLELPENLDPVEIFIIKATDHDSGDSGRVDYRITAGDPDGDFQLDSSSGALSTS
RPLDRERKDRYTLEVIAQDHGSPSLTSTATVEVTVLDINDNSPTFSSSSYAIDISEGAAI
GSLVVEVTANDADEGKNGQILYFLSKEARGAFTVDPDTGRILTTALLDREKIAFYSFQVY
AVDLSPAAPHNTTAQVTVTILDMNDNAPFFIQDPLIINVSSRRVSSNHVVATMRAEDKDF
GANGSVFYRFAKPVQGFSINSLTGEIQTTEALNSLTQSQYILIVEAMDQGSPPQSSLGVV
IIYVKEQNYDGIRFSRTTRDISIQENAAKGTAVAQAQAQYPDGTRGGITYSIFSGNKQQI
FSISSSTGEIWVQSSNGLDFEDTPRLRLVVKAETATSSSFMAVNLILQDVNDNLPRFQLQ
NYIAYMHEAQGYDSPIIQVVAEDVDQGLNGQVTYSIQSSGRSGLFKIDPLTGSVTTAAIM
DREIWMQTKLVITATDRGSPKLAGSATVTVIIVDLNDNSPTIPLPREVRVPENSLIGTEI
TIVTGNDVDSGPALSYSLHLDKNSQGKFGIHRYSGRVFLTSPLDFEEKTWYTLTVKASDS
KHQTDANLTVLVEDVNDNVPTFTQDLYQVALAEHSPPGTPVITVTATDRDSGENGRVTYQ
LISSSKEGFYIDSSNGTLFISQKAEFDPERPTVRVVIGAHDGGKPSLSAIATVQVQLTDV
NDNAPMFHQLEYRATVSEDQLPGGTILTLEAVDGDLSQENSGFDFAIASGNIGNAFQIES
SVRFIEGHGFQTVGTLILAEQLDFEVTSRYNLTIVVSDRGVPQRSSSVPAIITVNDVNDN
PPAFSRAEYVVSLSEGASAGSEILRLSATDPDSAPNAEIQYSISSGDDTGLFLVDQWTGA
LRLQKPLDRETQPSHVVIIQASDGHGHFALAPINVEVKDINDNRPYFPIETMTASIRENQ
PPHSAVAVLHAIDHDTGVYGQLKYFILDRSSQGKDFFMVDQNTGEVRSRQSFDFEKVNSF
HFMALAMDAGNNSATVTVQVYVTGEDEYDPVFTSTAFSFEVPEGAQKGQSIGQVQAKDED
GGIDGIVLYSLPSSSPYFDVNKTTGVIYLKMDSASSSSSQSRSKKETRLMTMDVIAHSPL
ETSRVTTAQLTIDVTNTSFGLATDFNILLISIIAASLGVIVILVIIAVALYLVKSRHKKK
GQNTGTAASDTALQQLDESKSAGGERIYHQTLPGYAGDQGGGGASYTRGGSLDPSHSSGR
GSAEAAEDDEIRMINEYPRVASITSSMQEHISARGPDSGIQQDADQLSDISGETGTLDAS
QWFKGKKLGSLSGTLLSGQVPVYRDEGGGYLGVGRGLNISHPKDYGFPEDGKPSIDGSLT
AIVASDEELRGSYNWDYLLNWCPQFQPLASVFTEIARLKDESLPPNNPRRPFQPKIKTDP
KPRIDPPPLITSVAHPGAKSVPPKPAITRTFPHLATLRRSPISHEGSISSAAMSPSFSPS
LSPLAARSPAVSPFGVTQGPSASMISTTEHSLEHSDDTEMRI
NT seq
9849 nt
NT seq
+upstream
nt +downstream
nt
atgaagttattcagaggctctggggacaatagctggagactaaggatgtttctacttgtt
tttttgactgtgggattgttaacagtaatggtcaatgcagatgcaactgcaagcatcctg
gagttacagttggatgaagagcagcctgcagggacaatagtgggtgacatcagtgctgga
ttaccacctggagaaacggcctccctctacttcatctctgatcatgagggcactagtgtg
ggaactgatctccatattgatgagaccactggcattatcaagactgctcggcgtctggac
cgggaagagagagaccattatagctttatagcagttaccatgactggcctaacagtgaag
gtatccatcactgtgaatgacattaatgatcatgcgccaatgttccccaagaataaggcc
tatttgaagattcctgagcagactgcagtggggacaaggttttccctggagccagccact
gatgcagacaaagatcagctcaccactcagggatatctcatcaaagatggaaatgtgggg
caggtgttcagacttgaaaccaagagggcagcaaataaggttctttacttggacctggtg
gtcaatggtgtccttgaccgagaaaagagagcttcttactctttggttttggaggccttt
gatgggggatctcctaaaaaaacagggcaaatgactctggatgtggcagtgcaggatatt
aatgaccatgctcctgtttttaatcagagcaggtatcatgccatcatctctgaaagtctc
cctcaaggtagcaatatcctacaagtgtttgcctcagatgcagatgaaggtgacaatggc
cttgtgctttatgagattaaccgcaggcaaagtgaccctgatcgatactttgtcattgac
cctcgttctgggattatcacactcaacaagcctttggactatgaagtcagaaaggtccat
gagcttgttgtacaagccaaagacaatgccagccacccagagatcactaatgcctttgtc
actatccatgttcgtgactacaatgataatcagcccactatgaccatcatcttcctcagt
gaggatgggtcacctcgaatatctgagggtgcccagcctgggcaatatgttgcccgtatt
tcagtctcagaccctgattatggtgaatattcaaatgtcaatgtctctctggaaggcggg
gatggtaagtttgccctcactactaaggacagcatcatctaccttatctgtgtggaccag
gttctggatcgtgaagaaagagactcgtatgatctccgggttatggctacagattctggc
accccaccactccgagctgaatcctcttttaccatccaagtcacagatatcaatgataac
cctcctctgtttgatcagcaggcatacaaacagactattccagaagtggtttacccaggt
agctttgtgctacaagtaacagcacgagacaaagaccaaggcccaaatggtgacgtccgc
tatagcatcctgcccaacaaggggacacattctaattggttcaccattgatgctgtgaca
ggtattatcaccacagctactgagctggattatgagacagatccaaaagcaagtgtcaag
gtagtggctacagatggtggaaagccccctttatcttctactgctgtggtggaaatcagc
ctacaggatattaatgacaacaagccagtctttgggagtagcttctataatgcttccatc
aaggagaacacagctgcagggacctgtttccttgaggtgacggcagtcgacgctgatggt
ggttcatttggtgcaataacctattctataggatcaggaccctccagttctcctccagcg
gtgttcagcattaataaagagacggggcatatctgcactagcgcagtccttgaccgagac
gagggatctgagagctatcacttcacagtcactgctactgatgggggtggtctgagctca
tctgcctttgtgaatgtggcattgctggacattaatgataacaggcccatgttttaccct
gtaagctatgcagtcagtttgagctctcagagtgctccaggaacctccgtcatcagagta
tcagcccacgaccctgacgcaggagagaatggcaaagtgacataccgcacagtgcctggt
ggaggctccaacttctttacgcttaacaaggacacaggggtgatctctctttcccgctcc
ttgcatggaaaggccaactctgtcattacaatggtgatcacagcactggacggaggtggg
ctcacagtgcccattaatgccagagtgaacgtcagtgttgtggctggctctgtagctccc
cccgtctttgagcaggcgcagtacttcttcactgtgcctgaggacgtgctgaggggcaca
gaagtcggtgtggtgtttgctaacggcaggaatggagccactaaggacatctcctacacc
atctcctctggcgatccagaaggctacttcactgtggacacagagacaggagctctgcgc
accagcctgcctttggatcatgaagcttggccctcgttggagttagaggtccaggctcgc
agtggctcccctccagtgtttgcccaaacactggtccgcatcaccatcactgatgtaaat
gataatgcacccaccttcctgccttcatcatcagagtctctgctgctgcctgaggctacc
aagatgggaactatagtgtaccgggtaaaggctgaggaccgcgattcaggagccaatggg
cagttgagctttgatcttctttcatctgaaagccagcgcacattcagtgtggacagaagc
agcggtgaaatccgcctgataggaagcctttcctatgagagtgctcctcgttatgacttg
ctggtgctggccaaggacaatggcgcccctcaactcagcgccaccttcactcttgtagtg
cacgtacaggctgagaatgaccaggggccagtgtttgacacaatgacctatcgtgtggag
ctgaaggaaaacacaccactgaacacccgtttcctgcaggtacgtgccctgagtagggat
catggtggaaatggagcctcctcctcaagctctgctccactctcttaccatctccggcct
gatggagatgcggcagggtttggaattgtctcggacagtggctggctgtttgtgaagagt
gcgctggacagggaggccaaagacatctacctgctcacagtactggccagctcaggcagg
ggacagctgaagaaaactggtagcgccactgtgcgggtctctgtgacagatgaaaatgat
aactcaccacggttttctcaggagagggtcttcctagcagtaagggaaaaccttcctgca
ggaacaggatttgggagagtttcagccacggaccgtgatgctggactcaacagccggctt
acttacaaactactacatactgatcgcaacttccagatcaactctcaaactggtgagatc
agcaccagggcagctctggatcgtgagcaccagtccagctatcagctggtggtggtggta
caggacggaggcactcctcctcggagtgctacaggcaccgcccatgtcactgtgctggat
gagaacgacaacgccccactcttcagtcacgtgttgcctggcagggagctgattatccaa
gtgcaggagggtctgcctgctggctcactcctgggaacactgcaggctaaagacccagat
gaaggagagaatggcacgatcttctactcattatctggctccagagcagaacggttctct
ttaaatcctaacacaggagagctgcgttctgcctccacattgaggagagctgaaaaggct
gagtatagtttaactgtaactgtctcggatcgtggtgcaccacctcagagcatctccagc
gtcctgcgcatacaggttgctggctcagtgagagctccacccaaaccaaacaccctatca
atgacacttaacacaatagagggcaccaaaccaggctctgtcataggttcagtacaccta
catgaccaacgtgatgtgttgcttgatggacaggtgacttaccttgtagtaggtggcact
gatcaagatggcaattttatggtggaacgtctcactggggatgtgtacttggccagagaa
ttggactatgaaatgggagctcactacaccttgcagattgaggtgaatgacttctcaaag
gcctcccctagcagtcatgtgatccagctggatattaatgtgcaagacagtaatgatcat
gcaccacagttccctgaagatcctgtgaccattgttgttcctgagaacatgcagctaggc
tcctccatttacgcattccaggcctctgataaggacggcagtggccccaacagtgaagta
cgctactctatccagcatcattggcctgatcgatcagatcttctgtcccttgatcccatc
actggtgtgctcaccctgggtcaagagctggaccacgagcagacctcaagcctttttctg
gtggtccgagcaactgactcagctacagatcccagtcaaaggcgctggagctcagtcaca
gcccgcatctttgtgactgatgaaaatgataatgctccggtattcagctcccctacagca
gtcagtgtaatggaggataagccaatgggctttgtgttgctctacgtcattgcccgtgat
gcagaccaaggagaaaatggcagagtgtcttaccgcattcaggcaggcaacacagcagga
cgattcagcctcaatcccaacactggctctctttccattctcaaagccctggaccgtgag
gagcaggacagctacaacctcactattgttgcagaggatcacgggacaccccagcactcc
accactcaggtcctgtctgtccaggttattgatgtgaacgatgaggctccctggtttgag
ttgagtgagtatgaggtgcaaatccgagagaatcagccacccggaaccaccatactcact
gtctctgctactgacagagaccaaggtgcaaatggacatgtatcctatggaggagtgaca
gtggaaggcttcgtcatttcaccagaaactggtgtcatttcacttaccaaagtccttgac
agggaacaacagcatcattacagcataaccgtgtatgccaaagatggagggatgccacct
aactttgcaaaggccaaggtgcatattacagtaatggatgagaacgataatgctccagct
tttgggaggctgcaatacagtctggagctgccagagaaccttgatccagtagagattttt
ataattaaagctactgaccatgacagtggggatagtggccgagtggactacaggataact
gctggagacccagatggtgacttccagctggacagcagttccggggccttgtctacctct
cgacccctggacagagagagaaaagacaggtatacactggaagtcattgctcaggatcat
ggaagcccctctcttactagcacagctactgtggaagtcactgtcctggacatcaatgac
aatagtcccacatttagcagtagcagctatgctatagacatttcagagggtgctgctatt
gggtcactagttgtggaagtaacagccaatgatgctgatgagggcaagaatggtcagatt
ctatacttcctgagcaaagaagcaagaggtgcattcactgtagaccctgatacaggtcgg
atcctcacaactgccttactggacagagagaaaatagctttctacagcttccaagtgtat
gcagtcgacttgtcccctgctgcaccccacaacaccacggcccaggtcacagttaccatc
ttggacatgaatgacaatgcaccctttttcatccaagatcctctcataatcaatgtatct
agcaggagggtatcctctaaccacgtagttgccactatgagggcagaagataaggacttt
ggtgccaatggttcagtattctatcgttttgccaaaccagtgcaaggcttctctataaac
tctctgactggagagatccaaactaccgaggcattgaacagcctaacccagagccagtac
atcctcattgtggaggccatggaccagggcagcccacctcagtcctccctgggggtggtg
atcatctatgtgaaggaacagaactatgatggtatccgcttctcccgtaccaccagagac
atcagcatccaggagaatgcagccaaaggtactgcagtggcacaggcacaggcgcagtat
ccggatggcacccgtgggggcatcacatacagtatctttagtgggaacaaacagcagatc
ttcagcatcagctccagcacaggggagatttgggtacagagctccaatggcctggatttt
gaggacacgccaagactccgtcttgtggtgaaggctgaaactgcaacttccagctccttc
atggctgtcaacctgattcttcaggatgtcaatgacaacttgcctcgctttcagctgcag
aactacatagcatacatgcatgaggcacagggctatgactctccaattattcaggttgta
gctgaagatgtggatcaaggactgaatggtcaggtgacctattccatccagtcttctggt
cgtagtgggctgtttaaaattgaccctctgactggcagtgtcaccactgcagctatcatg
gaccgagagatctggatgcagaccaaactagtgattacggcaactgatcgtggcagcccc
aagctagctggctccgccactgtgaccgtgattattgttgacctcaatgacaatagtccc
acaatccctctgccaagggaagtgcgagtgccagaaaactcacttatcggcacagagatt
accatcgtgacagggaatgatgttgactcgggcccagcgctgtcttattctctacatctg
gacaaaaactcacagggcaagtttggaatccaccgttacagtggcagagtgtttttgact
tctccactggactttgaggagaagacgtggtacacattaactgttaaagcctcggactct
aagcatcagactgatgccaatctgacagtattggtggaagatgtgaatgacaatgtgcct
acctttacacaagacctataccaggtggcactggccgaacattctccacctggcactcct
gtaattacagtaacagccacagatcgggactcaggagagaacggaagagtcacctaccaa
ctgatatcatcctctaaagaaggcttttacattgattccagtaatggcacattgtttatc
agtcagaaagctgaatttgacccagagcgtcccactgtgagggtggttattggggctcat
gatggaggaaagccatctctatctgccattgctactgtccaagtccagctgacagacgtg
aatgacaatgcccccatgtttcatcaattagaatacagagccacagtatctgaggaccaa
cttcctggaggcaccatcctgaccctggaggcagtggatggtgacctctcccaggaaaac
tcaggtttcgactttgctatcgcaagtgggaatattggaaatgcttttcagattgagagt
agtgttcgtttcatagaaggtcatggcttccagacagtaggcacactgatcctggcagag
cagctggactttgaggtaacatctcgttacaacctcaccattgtggtttctgaccgtggt
gttccccagcgcagctccagtgtgcctgctattattactgtgaatgatgtcaacgacaac
cctccggcattcagccgcgctgagtatgtagtgtctctgagtgaaggagcgtcagctggt
agtgaaatcttacggctgtctgcaactgacccagattcagctccaaatgcagagatccaa
tatagcattagctctggagatgacactggcctgttcttagtagaccagtggactggagcc
ctgcgcctacagaaacctctggaccgggagactcagccttcccatgtagtaattattcaa
gcttcagatggtcacggtcactttgcactggctcctatcaatgtggaggtgaaggatatt
aatgataacaggccttacttccctattgagaccatgactgcaagcatacgagaaaaccaa
ccccctcattcagcagttgcggtgctgcatgccatagaccatgatactggggtatatgga
cagctgaagtattttatattggacagatctagtcaaggaaaagacttctttatggtggat
caaaacacaggagaggtgcgttctcgtcagtcatttgactttgagaaggtgaactctttc
catttcatggctttggctatggatgcaggcaacaactctgccacagttactgtacaagtc
tatgtcacaggggaagatgagtatgatccagtcttcacctccacagccttttcctttgag
gtaccagagggagctcagaagggccagagcattggtcaggtgcaagccaaagatgaggat
ggtggtattgatgggattgtgctctactcattaccaagcagctccccatactttgatgtc
aacaagaccactggtgtgatctacctcaaaatggatagtgctagtagttctagtagccag
agccgttccaaaaaggagacacgccttatgaccatggatgttattgcccatagtccttta
gaaacctcaagggttacaactgcccagctaactattgatgtcaccaacacatcctttgga
cttgcaactgactttaacattctcctgattagcattattgcagcctctcttggtgtaata
gtcattttagtcataattgctgtggctctgtatctagtgaagtctagacacaagaagaaa
gggcagaacactgggacagcggcttcagacacagcactgcagcagttagatgaatccaaa
tcagcaggtggggagaggatctatcaccagacactaccagggtatgctggcgatcaggga
ggaggtggagcttcctacacaaggggaggctccttggatccatcacactctagtggaaga
ggatcagctgaggctgcagaagatgatgaaatccggatgataaatgagtatccacgagtg
gctagcattacctcttccatgcaagagcacatttctgcccgagggcctgactcaggtata
cagcaggatgctgaccagctctctgacatctctggtgaaacagggacactagatgcaagc
cagtggttcaaagggaagaagttgggaagtttaagtggcaccttgctctctggtcaagtt
ccagtctatagagatgaaggaggtggctaccttggagtgggcagggggctgaacatatcc
catccaaaggattatggcttcccagaggatggcaaaccttcaattgatggctctctcaca
gctattgttgctagtgatgaggagctgcgaggcagctataattgggactaccttctcaat
tggtgcccacagttccaacctcttgctagcgtttttacagaaattgccaggcttaaagat
gagagcctaccccccaacaacccacgtagacctttccaaccgaaaatcaagacagatcct
aaaccaagaattgatccaccccctctcattacatcagtagcccaccctggtgccaagtct
gttccaccgaaacctgctatcactaggacatttccacacctagcaaccctcagacgctct
cctattagccatgagggttccatctcatctgcagccatgtctcccagcttctctccatca
ctgtcccctctggcagcccgatcaccagccgtctccccttttggtgttacacaaggccca
tcagcctcaatgattagcaccacagagcactccctggagcacagtgatgacacagagatg
agaatctaa
DBGET
integrated database retrieval system
