Pangasianodon hypophthalmus (striped catfish): 113543579
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Entry
113543579 CDS
T05759
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113543579 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113543579 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113543579 (vps36)
Membrane trafficking [BR:
phyp04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
113543579 (vps36)
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113543579 (vps36)
Exosomal proteins of colorectal cancer cells
113543579 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
DUF1351
BBL5
GRAM
Laminin_II
Flu_M1_C
Motif
Other DBs
NCBI-GeneID:
113543579
NCBI-ProteinID:
XP_026797717
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MDRFMWTNGLLEMNETLVIQQRGVRLYDGDDKAKLDVGVVLLSTHRLIWRDQKNHECCIC
IPLSQIIFFEEQAAGIGKSAKIVIHLHPAPANKEPGPYQNSKFSYIKLSFKEHGQIEFYR
RLTEEMTQRRWENTPVSQPITPAGLKAGKTRAVGIVGIERKLEEKRKETDKNISEAFEDL
SKLMEKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTHY
HMQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDMVNACKLFESLKLPL
RLRVFDSGVMVVQLQSHSEEEMIASAIDNVSEKGSLTAEEFAKLLGLSVLLAKERLLLAE
KMGHLCRDDSVEGLRFYPNLF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggatcgattcatgtggaccaatggactccttgaaatgaatgaaacattagtaatccag
cagaggggggtcagactatatgacggagacgacaaggcgaaactcgatgtaggagtggtc
ctcctgagcacacatcgactaatctggagggatcagaagaatcatgagtgctgtatatgt
ataccgctgtctcagatcatattctttgaggagcaggctgcaggaattgggaagagtgcc
aagattgtcattcacctgcatccagctcctgctaataaagagcctgggccataccagaac
agcaagttctcctacattaaattatcctttaaggaacatgggcaaattgagttttacaga
cgtctgacagaggaaatgactcagaggaggtgggagaatacgccagtgtcgcagcccatt
acaccagcaggactgaaggcaggaaaaacacgtgcagtagggattgttggcattgagcgg
aagctggaggagaagaggaaagagacagacaaaaacatttcagaggcttttgaagatctc
agcaagcttatggagaaggctaaagagatggttgagctttccagatccatcgccaacaaa
atcaaagacaaacagggggacatcactgaggacgagactatccgcttcaagtcgtatttg
ttaagcatgggcatcgccaaccccgtaaccagggaaacacacggctcaggcacacactac
cacatgcagcttgctaaacagctaggagacatgctgcaggcaccactggaggagcgaggg
ggtatgatggccctcacagaggtctactgtctagtaaaccgagcacgagggatggagctt
ctttctcctgaagacatggtcaacgcctgcaagttgtttgagtctctgaaactccctctc
agattgcgagtgtttgacagtggtgtaatggtggttcagcttcaatctcacagtgaagaa
gagatgattgcatctgctatcgataatgtgtctgagaagggctccttaacagcagaggag
tttgctaaactcttaggactgtctgttcttcttgcaaaagagagactgctgctggctgag
aaaatggggcatctatgcagagacgactctgtggaaggcctgcgtttttatcccaacttg
ttctga
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