KEGG   Pangasianodon hypophthalmus (striped catfish): 113543588
Entry
113543588         CDS       T05759                                 
Name
(RefSeq) high mobility group-T protein-like
  KO
K10802  high mobility group protein B1
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03410  Base excision repair
phyp04140  Autophagy - animal
phyp04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    113543588
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    113543588
  09143 Cell growth and death
   04217 Necroptosis
    113543588
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:phyp03036]
    113543588
   03400 DNA repair and recombination proteins [BR:phyp03400]
    113543588
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:phyp04147]
    113543588
Chromosome and associated proteins [BR:phyp03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    113543588
DNA repair and recombination proteins [BR:phyp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     113543588
   MMR (mismatch excision repair)
    Other MMR factors
     113543588
Exosome [BR:phyp04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   113543588
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5 NOA36 Ets
Other DBs
NCBI-GeneID: 113543588
NCBI-ProteinID: XP_026797737
LinkDB
Position
Unknown
AA seq 203 aa
MGKDPAKPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSEFSKKCSERWKTMSAKEKGKFE
EMARLDKARYEREMKNYVPPRGEKKKRFKDPNAPKRPPSAFFIFCAEYRPKVKEETPGLS
IGDVAKKLGEMWNKTSAEEKQPYEKKAAKLKEKYEKDIAAYRKGKVVGGAAKAPTKPDKA
DDDDDDDDDDDEEDEDEDDEDDE
NT seq 612 nt   +upstreamnt  +downstreamnt
atggggaaagacccagcaaaaccaagaggcaaaatgtcctcttatgcctattttgtccag
acctgtagagaggaacataagaagaaacaccctgacacatcggtcaacttctcagagttc
tctaaaaagtgctctgagcggtggaagactatgtcagccaaggaaaagggcaagtttgaa
gagatggccagacttgacaaggcgcgttatgagcgggagatgaagaactatgttcctccc
agaggcgaaaagaagaagaggtttaaggaccccaatgctcccaagagacccccgtcggcc
tttttcattttttgtgcggagtatcggcccaaggtgaaagaggagaccccaggtctgtct
attggagatgtggccaagaagcttggagagatgtggaacaagacctctgctgaagagaag
cagccttatgaaaagaaggcagccaagctgaaggagaaatatgagaaggacattgctgca
tatcgaaagggaaaagttgtagggggtgctgccaaagcacccaccaagccagacaaagct
gatgatgacgatgatgatgatgatgatgatgacgaggaggatgaagatgaggatgatgag
gatgatgagtaa

DBGET integrated database retrieval system