Pangasianodon hypophthalmus (striped catfish): 113543596
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Entry
113543596 CDS
T05759
Symbol
pwp1
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phyp03009
]
113543596 (pwp1)
Ribosome biogenesis [BR:
phyp03009
]
Eukaryotic type
90S particles
Other 90S particles
113543596 (pwp1)
Pre-60S particles
Other pre-60S particles
113543596 (pwp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
WD40
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EIPR1
Beta-prop_WDR41
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_TEP1_C
WD_LRWD1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_ACSF4
MS_C
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
113543596
NCBI-ProteinID:
XP_026797751
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MSSQITCVGWVRKGVSKETPDKVELSKEELQRIIAEAKDELRQDDDDEEEQEEACPVSEQ
EKTETQSAPEMTADDEEKPAEDDLAEYELDKYDEEELETANLGDSLAGLTVFGSNEEDPY
VTIKDTDQYEREDFQIKPTDNLILAGRAEKDCCNLEVYVYNSEESSLYVHHDILLPAYPL
SVEWLNFDPSPEEGTGNYAAIGNMTPVIDVWDLDVVDSLEPVFSLGSKKTKKKKKKKNAA
EPVEGHTDAVLDLSWNKMVRNVLGSASADETVVLWDLTQGKPATTLRRHTDKVQTLKFHP
FEAQTLITGSYDKSAILYDCRNPESSNRIWRFSGQVERLVWNHFSPCNFLASTEDGFIYC
LDARSDKLVFTLRAHDGEVSGMDLSSQVSGCLVTSSADKHVKVWDILGNKPRLIHSRDMK
MGVMFCAACCPDEPFVYAFGGQKDGLRVWNISEVAAVAEVFGSRERLVANTVADSSSSTV
DMEVS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcagataacttgtgttggatgggtgaggaagggggtttctaaggaaacacca
gataaagttgaattgagcaaagaggagctgcagcgcatcatagccgaggcaaaggatgaa
ttaaggcaagatgatgatgatgaggaggagcaggaggaagcgtgcccagtgagtgagcaa
gagaagacagaaactcagtcagccccagaaatgactgctgatgatgaagaaaagccagcg
gaagatgatcttgctgagtatgaactggacaaatatgatgaggaagagcttgagacggct
aacctcggggacagtctggcaggtctgacagtgtttggcagtaacgaagaagatccttat
gtcaccattaaagacacagaccagtatgaacgagaggacttccagatcaagcctactgat
aaccttattctggctggtagggctgagaaggattgttgcaatcttgaggtttatgtgtat
aactctgaagaaagctctctgtacgtccaccacgacatcctcctgcctgcttatccactg
agtgtcgagtggctgaactttgaccccagccctgaagaaggcacaggaaattatgcagcc
ataggaaacatgactcctgtaattgatgtgtgggatctggatgtggtggacagcttagag
cctgtgttttctctgggcagtaagaagaccaagaagaagaaaaagaagaagaatgccgcc
gagcctgtagagggccacaccgatgctgtattggatttgtcatggaacaagatggtcagg
aatgttttgggaagtgcttctgctgatgagactgtggttctttgggacctcacgcaaggc
aagccagcaacgacactaagacgtcacacagataaagtccagactctgaaattccacccg
ttcgaggcacagactctcatcactgggtcttatgataagtcggctatcctatacgactgt
cgcaatccagaatccagcaatcgtatctggcggttcagcggtcaggtggagcgcctggtg
tggaatcacttctctccctgcaacttccttgcaagtacagaggacggcttcatttactgc
ttagatgccagatcagacaagctggttttcacactgagggcacatgatggagaggtgtct
ggaatggacctgagcagtcaagtgagcggctgtctggttaccagctctgctgacaaacat
gtgaaggtctgggatattctcggaaacaagcccaggctcattcactccagagacatgaaa
atgggagtgatgttctgtgcggcttgctgtcctgacgagccattcgtttatgcgtttgga
ggacagaaggatgggctgcgagtatggaacattagtgaggtagctgcagtggctgaggtt
ttcggcagtcgggagcgtttggttgccaacacagttgcggactccagcagcagcacggtt
gacatggaggtctcttaa
DBGET
integrated database retrieval system
