Pangasianodon hypophthalmus (striped catfish): 113543654
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Entry
113543654 CDS
T05759
Symbol
thsd1
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1 isoform X1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113543654 (thsd1)
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
113543654 (thsd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THSD1_N
THSD1_D3
THSD1_D2
TSP_1
TSP1_spondin
TSP1_CCN
TSP1_ADAMTS
Motif
Other DBs
NCBI-GeneID:
113543654
NCBI-ProteinID:
XP_026797845
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MIQGFTPLVQFLLLLLLMGFAMAGLHLWPSVHVALSNASVFVTYNADSNMIDSDLSMDLV
DLDRNLTVLTRPLPFNQSTGILEFDCTYFLYAGNFSFRLNQMSHQGALKSISRWWSPVLR
IQWPTFHFGVERANNNYSSGAFQVSVSTNIDFHVCLNINSSLYLEVSYMEHNQIGKNTID
KVQKRTTHNIQVVKSQHVDLKCASLLTEAGFIQVALKSHYTQQDIKSSGPLYLSRIFSYK
VLVENSYRSGCEGTVSVRLLSPPCTVTTGKVLLYKEASAASEQEKPSQLAFHFLTRGENE
TEFNCSQFDLGQKKYCFHYARIYSQSSSLAHTCIIVQRNAVEMWGPWQTWSGCSVTCGEG
VRERLRECLLPPAGGMQCTGMVREQSLCSLEDCTDVLPTISVPPPPAVDSFLGGNLVVVA
GIAVCLAVILVTILITVWRKLCHAPKCSSAQPESMHSPGGRKNSDEASICGRSVKRPSFS
ESMGATTLHKGETCPVSVRAASEKGVLACQQSFSLPMPFPQDAERLSPSGQKILPPIFGY
RLAQQQLKEMKKKGLKEATQVYHVSQSPVDDTMVEATASTSAGLTPVPQDLASQEEVSVS
HLRKSPFTEPTWPHRNSATLPDRLSPKVDLMLAMPKAVVSDRDRRQERTADWVAMVERSR
LGFSKNPNFRRTSSFNESNLQQLPKPQPFRERSMTQVVPRQLPEGSCRARAWEHPIPELE
DWSQTKYRMPDSSSDHRQRPWVDMPSFSKSKPTMVQLGTSKNQVTDSHGVGWAPSFGMDR
VERAEQNWNRRGPSPIQRNILARKLREANSSTNHHRQRSSTFSSCNQSRGRCRSLPLSAD
YSSSSYGLTEDEQRMMDISGYLGEEDGTGIMKDLRFS
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgatacagggtttcaccccactcgtccaatttctgctcctgctcctccttatgggattt
gcaatggctggtctacatctgtggccctcagtacatgttgctctaagcaatgccagtgtt
tttgtcacttacaatgcagacagcaacatgatagacagtgatctgtccatggatttggtt
gaccttgataggaatttaactgtgcttactagacctctgccattcaaccagtcaacgggc
attctggagtttgactgcacgtacttcctatatgctgggaacttcagcttcagattaaac
caaatgtcccaccagggtgcactgaaaagtatctccaggtggtggagcccagtactacgc
atccagtggcccactttccactttggagtggaacgtgctaacaacaactacagctctggt
gcatttcaggtttctgtgtctaccaacattgatttccatgtctgcctgaacatcaactca
tccctttacctagaggtcagctacatggagcacaaccagattgggaagaataccatcgac
aaggtgcagaaacgaacgacacacaacatccaggttgtgaagtcccagcatgtggacctc
aagtgtgcttccctgctgactgaggctggcttcatccaagtagctctcaagtctcactac
acccaacaggacatcaaatcctcaggaccactctatctgtctcgcatcttctcctacaag
gttctggttgagaacagctacaggagtggctgtgagggcacagtgtctgtccgcctgctc
tctccaccctgcacggtcaccacagggaaggtgttgctgtataaggaggccagtgcagct
tcagagcaggaaaagccgtctcagcttgcctttcactttctcacccgaggagagaatgag
acagagtttaattgctcccagtttgatcttggccagaaaaagtactgctttcattatgcg
cgtatctatagtcagtcctccagtttggcacacacatgcatcattgtgcaaagaaatgct
gtagagatgtggggcccatggcaaacatggagcgggtgcagtgtgacctgtggagagggg
gtacgagagcgtttgcgtgagtgcttgctgccccctgctggtgggatgcagtgcactggc
atggtgagagagcagtcactctgctccctggaggactgcactgacgttctgccaaccatt
tccgtcccacctcctccagctgtggactcctttctcggaggaaatctagttgtggtggct
ggtatcgctgtctgtctagctgtcatcctggtcactatcctcatcacagtgtggaggaaa
ctgtgccatgcccccaagtgtagctcagcacagcctgagtctatgcattctcctggtgga
cgcaagaactcagatgaggcttctatttgtggacgcagcgtgaagaggcctagtttctca
gagagtatgggggcaactacacttcacaaaggcgaaacatgccctgtgtctgttcgagca
gcgtcagaaaagggggtactggcctgtcagcagagtttctccctccccatgccctttccc
caggatgctgagcggctgtccccctctggtcaaaagattcttcctcccatttttgggtat
cgtttggcacagcagcagcttaaggaaatgaagaagaaaggacttaaagaggccacacaa
gtctatcatgtctctcagagtcctgttgatgacaccatggtggaggccacagcctcaaca
tctgctggtcttacgcctgtgcctcaggacctggcaagtcaagaagaagtcagtgtcagt
cacctccgcaaatcccctttcacagagcccacatggcctcacagaaactctgccactctg
cctgacagactgagccccaaggtggaccttatgttagccatgccaaaagctgttgttagt
gaccgggaccgacggcaagaacgcactgcagactgggtggcaatggtggaacgcagcaga
cttggtttttctaagaatccaaacttcaggaggacatctagcttcaacgagagcaacctg
cagcagttacctaagccacagccttttagggagcggagcatgactcaggtggtgccccgc
cagctcccagagggcagctgtagagccagagcctgggagcatccaatacctgagctggag
gactggtctcagactaaatataggatgcctgacagctctagtgaccacaggcagcgacct
tgggtagatatgccttccttctcaaaatccaaacccacaatggttcaattagggacttct
aaaaatcaagtaactgacagtcatggagtgggctgggccccatcttttgggatggatcga
gtagaaagggcagaacaaaattggaacaggagaggtccgtcacctattcagaggaacatt
ttggccaggaagttgcgagaagccaattcatcaaccaaccaccacagacagagaagttcc
accttctctagttgtaatcagagcaggggccgatgccgaagcctcccactctctgcagac
tacagcagctcctcctatggcctgactgaggatgagcagcgaatgatggacatttctgga
tatctgggagaagaggatgggacaggaataatgaaagatctcagattcagctga
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