Pangasianodon hypophthalmus (striped catfish): 113543721
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Entry
113543721 CDS
T05759
Name
(RefSeq) rho guanine nucleotide exchange factor 2-like isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
113543721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113543721
Membrane trafficking [BR:
phyp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
113543721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
SOS1_NGEF_PH
C1_2
Prok-RING_1
BRISC_FAM175B_helical
PHD
PHDvar_NSD
TFIIA
Motif
Other DBs
NCBI-GeneID:
113543721
NCBI-ProteinID:
XP_026797921
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MGPEESPHLKDTMSNTPPSSPHPHGCFPAPSPCSTLPSPPISPVRSGVVTFRSPATRHFA
HLDAWRRHSWEPGAAVQGNPANDTRSVSLEDLDMEEMALVLGGALGCRRARDMLRSVTCE
GSLSSLTEEEVGIETQPQLCSPLEEQASQMYSCSVSAPSLCVVRRTPKSPAPRPRSYCYD
NNAESALYYQGGGSTQSLDRELSSLRWEAGGETKGERDEEKEEVAGNAFVRTFSFLYKMT
SSRKNKEKERMREREREARDREARYTNGHLFTSLTVSGTTLCSACNKSITAKEALSCPTC
NVTIHNRCRDSLPNCVKMKQRQQKLALMRNSSSYSGTVTLRNKTHLKERPSSAIYPSDSL
RQSLLGSRRGRSSLLLSKSVSTNNIAGTLSDDSPLGLRRILSQSTDSLNFRSRTMSMESL
NDEGEIYYASVLEELEIEGRDFEADSWSMVVDSAYLQTHRKDVIKRQDVIYELIQTELHH
VRTLRIMDGVFRRGMLDEVQLEPGVVHVLFPCLENLLVIHTRFLTQLLNRRQHCLQPDST
HNFTISCISDILLQQFSGQCADEMRKTYAEFCSGHLKAVKLYKELLARDKRLQYFIRRVN
RGPLLRRHGFQECILLVTQRITKYPVLVQRILDNTKDNPEEEAGLKQALALLRDLLNGVE
QQVLELERTQRLQEIRSRLDPRSQAKLRSDAMFRPAELLRRQLIHEGTLLWKTPSSRLKD
VQVLLMTDILVFLQEKDQRYIFANLDKSAVVPLQNLLVRDIANQERGLFLISSEFSPPEM
YELHAASKDDRSTWLRHIQQAVSRCPSREEFPLIETEDKALLRRLKADIQQKDREVLELL
QERVTLFSELAEVMGGQEVVLPSNSRNLFRADTPQAPRGEQLLTQAITEVDRLTELLLSS
GFDIPLACTSNGHHSYTGALVINGQEVLVNGSQETAASQKVSQRLVNLSAQLHALQGAVI
RQDSIVELCVREGGTSLCRPGRSLSRDGTGEVGTAGELALLQRQHSLLQEELVRLRGAEG
RLKDSEKARAHLEKQLRDLKSNGATLGESTGNSQAALHRKESETDPNTDTPLASQASMEQ
TDGQQDCSDIDVDVISDDDDDEDLKVSPRSESPREGLGLLHPGMAKAACDHECAVQI
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgggtccagaagagtcgccacacctgaaagacacgatgtcaaacactcctccttcctcc
cctcatccccacggctgcttccctgctccttctccatgctctactcttccctctccaccc
atctctcctgtgaggtcaggggtcgtgacctttcgctctcctgccacacgccactttgcc
cacctcgatgcctggaggaggcacagctgggagccgggcgcagctgtgcagggaaacccg
gccaacgacacacgcagtgtcagtttggaagatctggacatggaggagatggcgttggta
ctgggtggtgctctgggatgccgcagagctcgagacatgctcaggtccgtcacttgtgag
ggctctttgtcctctcttactgaggaggaagttgggattgagacacagccacagctctgc
tcgccactggaggagcaggcaagtcagatgtatagctgcagtgtctcagctccaagcctc
tgtgtggtgagacgcacccccaaatctcctgctcctcgtcctcgctcatactgctatgat
aacaatgctgaaagtgccctgtactaccaaggcggaggttcaactcaaagtctagaccgt
gagctgtcctcacttcgctgggaggctggcggagagacgaaaggagaaagggatgaggag
aaagaggaggttgcaggcaatgctttcgtccgaacatttagcttcctgtacaagatgacc
tccagtcgaaagaataaggagaaagagaggatgcgggagagagaaagagaggcgcgagac
agggaggcgcgctacacaaacggccacctctttacctccctcaccgtgagcggcaccaca
ctctgctccgcctgcaacaagagcatcacagccaaggaggccctcagctgccccacctgc
aatgtcaccatccacaaccgctgcagagactccctgcccaactgtgtcaaaatgaaacag
cggcaacagaagctggcactgatgcgtaacagctcgtcctacagtggaacagtgacgctg
cggaataagacacatttgaaagagcgtccgagctcagccatctacccctccgacagtctg
cgccaatcactgctcggttcccgccgtggacgctcttccctcctgctgtccaaaagcgta
tctactaataacattgcagggacactgagtgatgactctcccttggggctgcgcaggatc
ttgtctcaatccacagactcgctaaacttcaggagcagaaccatgtctatggaatcactc
aacgacgagggagagatatactatgcctcagtgctggaggagctagaaatcgaggggcgg
gactttgaggcagactcttggagcatggtggttgactccgcctacctacaaacgcaccgc
aaagatgtcatcaagaggcaggatgtcatctatgagctgatccagacagagctgcatcac
gtgcgcacactgcgcatcatggatggagttttccggcggggcatgctggacgaggtgcag
ctggagccgggcgtcgttcacgtgcttttcccctgtctggagaaccttcttgtgatacat
actcgcttcctcacacagctgctcaaccgtcggcagcactgcctgcaacccgacagcaca
cacaactttaccatcagctgcatcagcgacatccttctgcagcagttttcaggtcagtgt
gctgatgagatgaggaagacctatgctgaattctgcagcggtcacttgaaagctgtaaaa
ctgtataaagagctactggctagagacaagagactacagtacttcatacggagggtgaat
cgaggtcctctgttgcgtcgtcacggtttccaggagtgcattttgctggtcacccaacgt
atcactaagtatcctgtactggtgcaacgcatcctcgacaataccaaggacaatccagag
gaggaagcggggctgaaacaggctctggcactactgcgagatttgttgaatggtgtggag
cagcaggtgctggagctggagcgaacacagaggctgcaggagatccgctccaggctggac
ccacgttctcaggccaaactgcgctcagacgccatgttcagacctgctgagctgctgcgc
agacagctcatccacgaaggcacactgctgtggaaaacacccagctccagacttaaggat
gttcaagttctcctcatgactgatatactagtgttcctgcaagagaaagatcagagatac
atctttgccaatttggataagtctgcagtagttccactacagaacctgttggtcagggac
atagctaatcaggagcgaggcttgttcctcatcagcagtgagttcagcccaccggagatg
tacgagctgcacgcagcttccaaagatgaccgaagcacctggttacggcacatacagcaa
gctgtcagcagatgtccctcaagagaagaattcccgctaattgagacagaagacaaggcc
ctgttgcgaagactcaaagctgatatccagcagaaggacagggaagtgttggagttgctg
caagagcgtgtgacactgttctctgaacttgctgaggtcatggggggtcaagaggttgtg
ctgccgtctaactccaggaacctgttcagagctgatacacctcaggcacctcgaggagaa
cagctactcacacaagccattactgaggtggacagactgactgagctgttgttaagctct
gggtttgacatcccgttggcctgcacttccaatggtcaccacagttacacaggggcactg
gtgataaatggacaggaggtgttagtcaatggttcacaggagacagcagcttctcagaaa
gtctctcagcgactggtgaatctcagcgctcagctccatgctctgcagggggcagtgatt
cggcaggactccatcgtagagttgtgcgtgcgtgagggtggtacgtcattgtgccgcccg
ggtcggtctctctcacgtgacggaaccggcgaagtggggacagcgggagagctggcactg
cttcagcgtcagcacagcctcctgcaggaggagctggtccgcctcagaggagctgaagga
agactcaaagacagcgagaaggcacgggcccaccttgaaaaacaactacgagacctgaag
tccaacggcgccaccctgggggaaagcacaggaaattcccaggctgcactacatcgcaaa
gagagtgaaactgacccaaacactgacaccccgctggccagtcaggcatctatggagcag
acagacggtcagcaggactgcagtgacatagacgtagatgtgatctcagacgatgacgat
gatgaagacttgaaggtgtccccccgttccgagagccctagagagggcctaggactcctc
caccctggtatggctaaagcggcatgtgaccatgagtgtgcagtgcaaatatag
DBGET
integrated database retrieval system
