Pangasianodon hypophthalmus (striped catfish): 113543847
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Entry
113543847 CDS
T05759
Symbol
irx1
Name
(RefSeq) iroquois-class homeodomain protein IRX-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113543847 (irx1)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
113543847 (irx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
113543847
NCBI-ProteinID:
XP_026798144
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MSFPQLGFPQVYGVERASPPRDGGSESGGGVTGSPASSAAALAPLLGVYAHPWSAHRYGA
FMPYSSAEAALLNHMGSQYELKENPGAHPAGFAVHTAPGFYPYSQYQYGDPARAKSATRE
TTSTLKAWLQEHKKNPYPTKGEKIMLAIVTKMTLTQVSTWFANARRRLKKENKVTWGRSA
EDGDGCGYDSDRDDDDESAHKHEREEEIDLETVDTDEAEEDRVEVRQEPSEAKAHEQSET
ESESAEARELNSPAGSVPVSKDASAGKSGSADVSPGCQRPVNSKPKIWSLAETATSPDNC
QKASSVSTAVTHPAFLPTNGIYTCQIGKLNSWTGGAFLGAGPLIGVRSLMGVSPSSHYIT
SSAQSESPTHSLSLSPQHSTDREHVQRTESPALPLRPSFPVMHDRSHHETAQRALKTVS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcagctgggcttcccgcaggtgtacggagtggagagagcgtctccgccg
cgggatggcggctcggagagcggcggcggagtcaccgggagtcccgcgagctctgcggct
gcgctcgcgcctctgctcggcgtgtacgcgcatccgtggagcgcgcaccggtacggagcc
ttcatgccgtacagcagtgccgaagcggcgctcctcaaccacatgggctcccagtacgag
ttgaaggagaaccccggtgctcacccagccggattcgctgtgcacaccgcccccgggttc
tacccgtacagccagtaccagtacggagacccggcgcgggccaagagcgccacacgggag
accaccagcacgctgaaagcctggctgcaggagcacaagaagaacccgtatcctactaaa
ggcgaaaagatcatgctggccatcgtgaccaaaatgaccctgacgcaggtgagcacgtgg
tttgccaacgcgcgccgccgcctcaagaaggagaacaaggtgacgtggggacgcagcgcc
gaggacggagacggctgcggctacgacagcgaccgcgacgacgatgacgagagcgcgcac
aagcacgagcgcgaggaggagatcgacttggagaccgtggacaccgacgaggccgaagag
gaccgcgtagaagtgcgccaagagccgagcgaggccaaagcgcacgagcaaagtgaaacg
gagagcgaaagcgcagaggcgcgcgagctaaacagccccgccggttccgtgcccgtgagt
aaagacgcgagcgcggggaaaagtggctcagcggacgtttctccgggatgccagaggcct
gtgaactccaaacccaaaatctggtcgctcgcggaaacagcgacgagtcccgataactgt
cagaaagcgagcagtgtgtcgacggcagtcactcacccggcttttttacccactaacggg
atttacacgtgtcagatcgggaagctgaacagctggactggaggcgcttttctcggtgca
ggacctctaatcggtgtgcgctctttaatgggagtgagtccgagcagccattacataacc
tcaagcgctcagagtgagagtcctacacacagcctcagcctcagtccacagcacagcacc
gatcgagaacatgttcagagaactgaatctccagcacttcctctgaggccatcatttccg
gtcatgcacgacaggtctcaccatgaaacagcacagcgagctctgaagactgtttcctga
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