Pangasianodon hypophthalmus (striped catfish): 113543857
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Entry
113543857 CDS
T05759
Name
(RefSeq) replication protein A 32 kDa subunit-A-like isoform X1
KO
K10739
replication factor A2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03030
DNA replication
phyp03420
Nucleotide excision repair
phyp03430
Mismatch repair
phyp03440
Homologous recombination
phyp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113543857
03420 Nucleotide excision repair
113543857
03430 Mismatch repair
113543857
03440 Homologous recombination
113543857
03460 Fanconi anemia pathway
113543857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phyp03032
]
113543857
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113543857
DNA replication proteins [BR:
phyp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
113543857
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
113543857
MMR (mismatch excision repair)
113543857
DSBR (double strand breaks repair)
HR (homologous recombination)
113543857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
RMI2
Motif
Other DBs
NCBI-GeneID:
113543857
NCBI-ProteinID:
XP_026798159
LinkDB
All DBs
Position
Unknown
AA seq
248 aa
AA seq
DB search
MESQGYGYSSSPGGFSSSKNERKPKTAGILCVLPCTVSQLLSAREHRDSFFVRDMELNQV
TVVGLIRRAKPTMTHLVYSLDDMTGPALDVKQWLNLEDVNMNHCVIPPGTYVKVVGSLRS
FQHHRSMVAFNIRRLDNFNEITSHMLEVIHAHLQSDSSSYSRMKNETTTIINTSHASDPA
TMGFTASQRQVFTLIKSCPLAEGISMQCLRNSLKYLSFYDIRTCLQFLINEGHIYSTIDD
CHFKCTNG
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggagagccaaggttacgggtatagctcttctccaggaggattttcatcttcaaaaaat
gaaagaaagccaaaaacagcaggaatactgtgtgtactgccatgcactgtgtctcagctc
ctgtcagctagagaacacagagactccttctttgtaagagacatggagctcaaccaggtg
actgtggtgggtttgatcagaagagccaaacccacgatgacacatcttgtgtattctctg
gatgatatgactggccctgctctagatgtcaaacagtggctgaatcttgaggatgtcaat
atgaatcattgcgttattcctcctgggacatatgtcaaagtagttggaagccttcgctcc
tttcagcaccacaggtccatggtagctttcaacatccgccgtctggacaactttaatgag
atcacttcacacatgttggaggtgattcatgcccatctgcagagtgatagcagctcgtat
agtaggatgaaaaatgagaccacaactataatcaacacatcacatgcaagtgacccagcc
accatgggttttacagccagtcagaggcaggtatttacattgattaagagctgtcctttg
gccgaaggcatcagtatgcagtgtctgaggaattcactcaaatatctctccttctatgac
atcaggacttgcctgcagtttcttataaatgaagggcacatttactctacaattgatgac
tgccatttcaagtgtaccaacggctaa
DBGET
integrated database retrieval system
