Pangasianodon hypophthalmus (striped catfish): 113543942
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Entry
113543942 CDS
T05759
Symbol
opn3
Name
(RefSeq) opsin-3
KO
K04256
c-opsin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
phyp01009
]
113543942 (opn3)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
phyp04030
]
113543942 (opn3)
Protein phosphatases and associated proteins [BR:
phyp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113543942 (opn3)
G protein-coupled receptors [BR:
phyp04030
]
Rhodopsin family
Vision
Opsin
113543942 (opn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
113543942
NCBI-ProteinID:
XP_026798286
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MTPLNDTGTRMHADTSLFPVGTYKLLAFTIGTIGVLGFCNNLLVLALYYKFKRLRTPTNL
LLVNISVSDLLVSVIGTNFTLVSCLERGWVWDTTTCVWDGFSNSLFGIVSIMTLCTLAYE
RYIRVVHAKVIDFPWAWRAITHIWLYSLAWTGAPLLGWNRYTLEIHQLGCSLDWASKDPN
DASFILLFLFACFFVPVGIMAYCYGNILYTVHMLRSIEDLQTLQIIKVLRYEKKLATMFL
LMIFCYLLCWTPYAVVSMLVAFGKQSVVSPTVAIIPSVFAKSSTAYNPIIYGFMSRKFRR
CMLQLLCSRLAHLQCGIKDHPLTCSSQPVRPIVMSQSRDDRPKKRVTFNSSSIVFIIASN
DTDTLDVSSKCSESSEINVIQVRPL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgactcctctgaacgacaccgggactcggatgcacgcggacacctcgctgttccctgta
ggaacctacaaacttctcgccttcactatcggaaccatcggcgtgctgggtttctgcaac
aatctgctcgtccttgcactttactacaagtttaagaggctgcggacgcccaccaactta
ctgctggtgaacatcagtgtgagcgacctgctggtgtcggtgatcgggaccaacttcacc
ttggtctcgtgtttggagagaggatgggtgtgggacaccactacgtgtgtgtgggacgga
ttcagcaacagcctgttcggtatcgtgtccatcatgactctgtgtaccctggcatatgaa
cgctacattcgagtggtacatgccaaggtcatagatttcccttgggcctggagagccatc
acccacatctggctttactcacttgcatggactggtgctcctctcctgggctggaacagg
tacaccctggagatccaccaactgggctgctccttggattgggcctctaaagaccccaat
gatgcctccttcatccttttattcctctttgcctgcttctttgttcctgtggggatcatg
gcctactgctatgggaacattttgtacacagtgcacatgttgcgctccattgaggatctg
cagacattgcaaatcattaaggtcctacgctatgagaagaagttggccaccatgttcctg
ttgatgattttctgttatctgctgtgctggacaccctatgccgtggtctccatgctggta
gcttttggcaagcagagtgtcgtctcgcccactgttgccatcatcccctcagtcttcgcc
aagtccagcacagcttataacccaattatatatggcttcatgagcaggaagtttcggcgt
tgcatgttgcaattgctgtgctcccgcctggcccacctgcagtgtggcattaaggaccac
cccctgacctgctccagccaaccagtacgtcccatcgtgatgtcacagagccgtgatgac
aggcctaagaaaagggtgacgttcaactcctcttccattgttttcatcattgccagcaat
gacacagacactctggatgtcagctccaaatgtagtgagtcatcagagatcaacgtgatt
caagtccgacccctttga
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