Pangasianodon hypophthalmus (striped catfish): 113543992
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Entry
113543992 CDS
T05759
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
phyp01100
Metabolic pathways
Module
phyp_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
113543992
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
phyp01003
]
113543992
Enzymes [BR:
phyp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
113543992
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
113543992
Glycosyltransferases [BR:
phyp01003
]
Glycan extension
O-Glycan
113543992
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
DLP_helical
Csm1_N
NYD-SP28_assoc
UPF0242
DUF848
Motif
Other DBs
NCBI-GeneID:
113543992
NCBI-ProteinID:
XP_026798354
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MCVCDTGLFEMLRRGLFLWLSRVCGVLVLVCCFLSLLYVITCNPHTDDPLVAPRLGAPGS
PRGPGVPGVLSGAPLGSSSHENYQALLQEREEQQRQHISSLKKQIAELKEALQERVERPK
ELQEKTGNAATDLNEFLRTQMGRAEISAGVRLPNEYAVIPFDSFTLQRVYQLETGLTRHP
EEKPARKDRRDEINEVVESAVHTLNSHKHNMGDKFSADKVYSMADFIEGLARTEKDKGTL
YELTFRGDRKNEFRRLVLFRPFGPLMKVSNERVATSHTAINIIVPLSQRADKFKQFMHTF
REVCIKQDGRVHLTVVYFGQEQMNEVKGILESTSRELNYRNFTMIHLNEEFSRGRGLDVG
ARAWKGGNVLLFFCDVDIVFTADFLNSCRLNTQPGKKVFYPILFSQYNPAVIYGGSDHVP
PVEQQLVIKKDTGFWRDFGFGMTCQYRSDFINIGGFDVDIKGWGGEDVHLYRKYLHSNLL
VIRAPSRGLFHLWHEKHCADELPPEQYKMCMQSKAMNEASHGQLGMLLFRHEIEAHLRRQ
KQRIAAKKA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtatgtgacactggtttgttcgagatgttgcgcagaggattgtttttgtggctc
tctcgcgtctgtggcgttttagtcctcgtttgctgctttctttctctcctctatgtcatc
acttgcaaccctcataccgatgaccccttggtggcacccaggctgggcgcaccaggctct
ccaagagggcccggggttcctggtgttctcagcggcgcccccttgggttcatcaagccac
gaaaactatcaagctttgcttcaggaacgtgaggagcagcaacggcaacacatttccagc
ctgaagaagcaaatcgcagaactgaaggaagccctgcaggagcgagttgagcggccaaag
gagcttcaggagaaaacgggcaatgcagcgactgatctgaatgagtttctccgcacccaa
atgggccgggcagagataagtgcaggtgtccgcttgccaaatgagtatgctgtgattcca
tttgacagcttcacgctgcagcgtgtgtatcagctggagacaggactcacacgccatcct
gaggaaaaaccagctaggaaagatagacgcgatgagattaacgaagtggtggagagcgcc
gtgcacacactgaactcgcacaaacataatatgggagataaatttagtgcagacaaggtg
tacagcatggctgatttcattgaaggtctagcacgaacggagaaggataaaggaacgctg
tacgagctgacattccgtggagataggaaaaatgagttcaggcgtctcgttctgtttcgt
ccctttggcccgttgatgaaggtgtcgaatgaacgtgtggcgacgtctcacactgccatc
aacatcatcgtaccgctttcacagagagccgacaaattcaaacagttcatgcataccttc
agggaggtgtgtataaagcaagatggacgagtgcacctcaccgttgtctactttggccaa
gagcagatgaacgaagtcaaaggaatcctggagagcacgtccagagagctgaattaccgt
aatttcacaatgatccacctgaatgaggagttttcccgaggccgaggtttggacgtgggt
gcccgagcatggaaaggaggaaacgttctgctgttcttctgtgacgtcgacatcgtcttt
actgctgactttctcaacagctgccgcctgaacacacagccaggaaagaaagtgttttat
ccgattctgttcagccagtacaatcccgcagtgatttatggaggcagcgatcacgtcccg
cctgtggagcaacagctggtgattaagaaagacacaggcttctggcgggactttggtttc
gggatgacctgtcagtacagatctgacttcatcaacataggtggatttgatgtggatatt
aaagggtggggcggtgaggatgtgcacctctacaggaagtacctacacagtaacctgctg
gtgatccgtgcgccgtctcgtggccttttccacctgtggcatgagaagcactgtgccgat
gagctcccacccgagcagtacaagatgtgcatgcagagcaaagccatgaacgaggcatcg
cacgggcagctggggatgctgctcttccggcatgagatcgaggctcacctgcgcagacag
aagcagcgcatcgccgccaagaaagcctga
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