Pangasianodon hypophthalmus (striped catfish): 113544008
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Entry
113544008 CDS
T05759
Name
(RefSeq) calponin homology domain-containing protein DDB_G0272472-like
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113544008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113544008
Membrane trafficking [BR:
phyp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
113544008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
Motif
Other DBs
NCBI-GeneID:
113544008
NCBI-ProteinID:
XP_026798375
LinkDB
All DBs
Position
Unknown
AA seq
1219 aa
AA seq
DB search
MSLADQSLQFFPVSARVSVLRARGLRIKGKDGTNDAYTALQAGRETFRTPVAEKRAEPVW
GGDDAAFIFTLPTESARAEQDGVPLQVRVLHRVPLGTDKLLGLTVINVHELRQESARENP
QWFKLLNKAGKADKERGEILLDIQFLKSSMSVSMIDLSDKSHSRLGKFKDKLRGKKKDGL
SDSASAILPSVSQVLTDSEGEMEGETEGESPKKKKNKLKSLFVPKSNMKRNSMSQSMSSL
GTLPDKNSSISSSTSSGLNVESSEGKKKKKFTFLTHKRNGSTDSKASNQSDFTFGSTNQN
PPSQIDICINGSHVYREATQSEEVQEMEEEEEEEGEKEEEEERRRREEEERERLEEERRR
EEKERIRIETGKEEQKRRIEEEEKERIRIEREKDEQKRRMVEEEKERIRMEREKEEQRRK
MAEEKERIRMEREKEEERRRMEEEEKERIRMEREIKEQRRRTEEEEKERIRIEREKEEQK
RRMVEEEKERIRMEREKEEQKRRMEEEEKERRRIEVENEEQRIRIEEEERERQRIEKEEQ
RRKLEEEERIRMKREKEEQMRKLEEERKRKEEREAEELRRKIEEENDRKKEEEKMRIAEE
ERMKEEKKRAEKKRMIEEEEKHKEEKRIEMEQRLADEKKAREEEERRIAEEKEKQRKEEE
RVREEKERKKAELEIKRKEEEQKRRNMEIDEKKKKEKQMREEQEGLRKEENLFEESVISQ
STDFTRSARISNVKPSVSVSATVTQPSMANTNPFLDDDLDASISENIISVEETTAKKGRA
PLPPHKKPQLTGSDVSSRGVPKQHSHLKEVSKRAAPQPPGMMTREVTVKEKTDQAGLGQG
ARKTPERHHASKVSSVSQDDTQVDTNPFTCDGPVAVKHNKRPAPKPRSGISVSEDKPKND
GKNLIEGTVHHEEKASASNSKGNPPNWKLLSIPNDITAEHVISDLTDDLSQGEKHLEDIV
EPDSAKPNAPSCVNQDLCPEPLISNTDGLPSMERSKKKSQAPLPPAKPKRTGDPSTPHQQ
PSLLNKTNLEQAQESHSNKKYQDNALASSVEILGISTPSSSTVSSSPFTPLAEKSQVMKP
CATESLETDSGSGSSTLPWAKVVPSDAGQVREQVAPISVIRQHAVKPLSAAENQPEIHES
RVTDNTQPKTTAASAVMKGPYSQLTQSELISLALRQQEQISQRDARIQELEQYIDNLLVR
VMEEKPSILMTMNAKNKSM
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggcggatcagagtctgcagtttttcccggtgagcgcgcgggtgtcggtgctg
cgagcgcgaggcctccggatcaaagggaaggacggcaccaacgatgcgtacacggcgctg
caggcgggccgcgagacgttccgcacgccggtggcggagaagcgcgcggagccggtgtgg
ggcggggacgatgccgccttcatcttcacgctgccgacggagagcgcgcgcgccgagcag
gacggcgtccccctgcaggtgcgcgtgctgcaccgcgtcccgctcggaacggacaagttg
ctcggactgaccgtcatcaatgtgcacgagctccggcaggaaagcgcgcgcgagaacccg
cagtggtttaagctgttaaataaggcggggaaagccgataaggagcgcggtgagattctc
ctggacattcagttcctgaagagcagcatgagcgtcagcatgattgacctctcagacaaa
tcacactcgcgccttggaaagttcaaggacaaactgcggggcaaaaagaaagacgggctg
agcgactcagcctccgccattttgccttcggtcagccaggtgctgacagacagtgaggga
gagatggaaggagagacggagggagagtcaccaaaaaagaagaagaacaaactaaagtct
ctttttgttcctaaatccaacatgaagcgtaactctatgtctcaatccatgtcctcatta
gggacacttcctgataaaaactcgtccatcagctcgagcacatcctcaggcctcaatgtg
gaatcttcagaagggaagaaaaagaagaaatttacctttttaacacacaagcggaatggt
agcacggacagcaaggcatccaatcagagtgacttcacctttggctcgaccaatcagaat
cctccatcacagattgatatttgcataaatggcagtcatgtttacagagaagcaacccag
agtgaagaagtgcaggaaatggaggaggaggaggaggaagagggagagaaagaggaagaa
gaggagagacgtagaagagaggaagaagagcgggaacgactggaggaagagagaaggagg
gaagaaaaagagaggataaggattgaaacagggaaggaagaacaaaaaagaaggattgag
gaggaagaaaaagaaaggataaggattgaaagagagaaggatgaacaaaagagaaggatg
gttgaggaagaaaaagagaggataaggatggagagagagaaggaagaacaaaggagaaag
atggcagaggagaaagaaaggataaggatggaaagagagaaggaagaagaaaggagaagg
atggaggaggaagaaaaagagaggataagaatggagagagagatcaaagaacaaagaaga
agaactgaggaggaagaaaaagaaaggataaggattgaaagagagaaggaagaacaaaag
agaaggatggttgaggaggaaaaagagaggataaggatggagagagagaaggaagaacaa
aagagaaggatggaggaggaagaaaaagaaaggagaagaatagaggtagagaatgaagaa
caaaggataaggatagaggaggaagaaagagagagacaaaggatagagaaagaggagcag
aggagaaagttggaggaggaagaaagaattaggatgaagagagagaaggaagaacagatg
agaaagttggaggaggaaagaaaaagaaaggaagagagggaggcagaagagctgaggaga
aagatagaggaggagaatgacaggaagaaggaagaagagaagatgaggattgctgaggaa
gaaaggatgaaggaagagaagaaaagagcagagaaaaaacgaatgatagaggaggaagaa
aaacataaagaggagaaaagaattgaaatggagcaaaggttagcagatgagaaaaaagcc
agggaggaagaagagagaagaatagcagaagagaaggagaaacaacgtaaagaagaagaa
cgagttagagaagaaaaagagcggaagaaggcagagttggagataaagagaaaagaagag
gagcagaaaagaaggaatatggagatagatgaaaagaaaaagaaggaaaaacagatgaga
gaagaacaggagggattgagaaaagaagaaaatttatttgaagaaagtgtcatctcacag
tccactgacttcactcgttcagccagaatctccaacgttaaaccgagcgtgtccgtctct
gcaacagttactcaaccatctatggcgaacaccaacccctttttggatgacgatttagat
gccagcatttcagaaaacatcatcagtgttgaagagacaactgctaaaaaaggacgagct
ccattacccccacataagaaaccacagttaacagggtcagatgtttcctccagaggtgtt
cctaaacagcattctcatttaaaagaagtctcaaaacgtgcagcacctcaaccaccaggt
atgatgaccagagaagtgacagtcaaagaaaaaacagatcaagcgggtcttggtcaagga
gcaaggaaaacccctgagagacatcatgcgagcaaagtctcgtcagtctctcaagacgac
acacaagttgatactaatcctttcacatgtgatggaccagtggctgtaaaacacaacaag
agaccagcaccaaaaccaagaagtgggatatcagtgtctgaagataagccaaaaaatgat
ggcaaaaatctcatagaaggtactgttcatcatgaagaaaaagcaagtgcttctaatagc
aaaggtaatccaccgaactggaaactgttgagcatcccaaatgatattacagctgaacat
gtcataagtgaccttactgatgacctgtcacaaggagaaaaacatctggaggacatagtt
gagcctgactctgcaaaaccaaatgcaccttcatgtgtcaatcaggatttgtgtccagaa
cctctgatttcaaacactgatggactgccaagcatggaaagatccaaaaagaagtctcaa
gctcctcttcctccagctaaacccaaaagaactggagatccaagcacaccacatcagcag
ccatctcttctaaacaagactaaccttgaacaagcccaagagagccatagtaataagaag
taccaagataatgcattggcttctagtgttgaaatacttggaatcagcactccttcatca
tccacagtttcatcatcaccattcactccacttgctgagaaatcacaggtgatgaaacct
tgtgctactgagtcattggagacagattctggttctgggtctagcactttgccatgggct
aaagtggtacccagtgatgcaggtcaagtaagggaacaagttgctcccatctcagtaatc
aggcagcatgctgtgaaacccctgagcgctgcagagaatcagcctgaaattcatgaatct
cgagtaactgacaacacacagcccaaaacaacggctgcaagtgcagtgatgaaaggcccg
tattctcaactgacgcagtctgagctgatctccctagcattgcggcaacaggaacagatt
tcacagcgtgatgccaggatccaggagctggagcaatacatcgataacctgctggtgcgt
gtgatggaggaaaaaccaagcattctgatgaccatgaacgccaagaacaaatctatgtga
DBGET
integrated database retrieval system
