KEGG   Pangasianodon hypophthalmus (striped catfish): 113544021
Entry
113544021         CDS       T05759                                 
Name
(RefSeq) vesicle-associated membrane protein 8-like
  KO
K08512  vesicle-associated membrane protein 8
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04130  SNARE interactions in vesicular transport
phyp04140  Autophagy - animal
phyp04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    113544021
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    113544021
   04140 Autophagy - animal
    113544021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:phyp04131]
    113544021
Membrane trafficking [BR:phyp04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   VAMP
    113544021
SSDB
Motif
Pfam: Synaptobrevin SpoIIM Prominin DUF2207_C SNARE CoV_S2 ODV-E18 CD34_antigen Baculo_F Fzo_mitofusin DUF2976 Integrase_H2C2 MSC_0620_UU052 Amnionless DDB_G0292058_C C3orf49 VirB8 Spectrin_6 Orf78 ALN
Other DBs
NCBI-GeneID: 113544021
NCBI-ProteinID: XP_026798395
LinkDB
Position
Unknown
AA seq 102 aa
MAEQNAQPQGSSTLNQVQEQVNDVKVILKDNINKVLERGERLDDLIEKTDDLQVTADSFQ
KTSARVSRKYWWKNTKMMIIIGVVVFIIVLLIILLATGVIPS
NT seq 309 nt   +upstreamnt  +downstreamnt
atggctgagcaaaatgcacaaccccaaggctccagtacgcttaatcaagtgcaggagcag
gtcaatgatgtcaaagttatcctcaaagacaacataaacaaagtgttggagaggggagag
aggctagatgacctaatcgagaaaacagatgatctgcaagtcactgccgactcatttcaa
aagacatctgcacgggtttccagaaagtattggtggaaaaacaccaaaatgatgattata
attggagtggttgtgttcatcattgttttgctcatcattcttttggcaactggagtcatt
ccctcataa

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