Pangasianodon hypophthalmus (striped catfish): 113544054
Help
Entry
113544054 CDS
T05759
Symbol
itga1
Name
(RefSeq) integrin alpha-1
KO
K06480
integrin alpha 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04510
Focal adhesion
phyp04512
ECM-receptor interaction
phyp04810
Regulation of actin cytoskeleton
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113544054 (itga1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113544054 (itga1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113544054 (itga1)
04810 Regulation of actin cytoskeleton
113544054 (itga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113544054 (itga1)
04515 Cell adhesion molecules [BR:
phyp04515
]
113544054 (itga1)
04090 CD molecules [BR:
phyp04090
]
113544054 (itga1)
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113544054 (itga1)
Cell adhesion molecules [BR:
phyp04515
]
Integrins
Integrin alpha subunits
113544054 (itga1)
CD molecules [BR:
phyp04090
]
Proteins
113544054 (itga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
113544054
NCBI-ProteinID:
XP_026798460
LinkDB
All DBs
Position
Unknown
AA seq
1185 aa
AA seq
DB search
MRSGEQCLRLAALLVLPSCLLSFNVDEKNGMSFSGPIEDMFGYTVQQFNNSEGKWVLIGS
PLKGQPAQRTGDVYKCPVGHGSSSSCIKLDLPAHTTIPNIHEVKENMTMGTTLVANPDGN
GFLACGPQYGYMCGNQQYITGICSNVSSSFQVLNSIAPTIQDCKQDMDIVIVLDGSNSIF
PWKHITEFLVKFLKKIEIPPARVGIVSYGDDVGHVFNLSQFSNTEDLVKNAAGIKQRQGL
KTMTALGIDTARKEAFTVERGARPGVKKVMVIVTDGESHDDYRLKDVVKDCEEDGIERFA
IAVLGDYNRQNKSKEEVNKFIEQIKSIASNKTDDHFFNVEDERALITIVDALGSKIFALE
ATSGNHTSSFEMEMSQSGFSAHTSKAGVMLGAVGAYDWNGTVVMQSGNQFVVPKNNIFHN
PLVERYQGMAGYVGYDVQSAYTPSGVLYITGAPRYNHTGRVIVYRFNGEKVTVMQNLEGE
QIGSYFGSVLQTLDVDGDSYTDLLLVGAPMFMGPERDEQGQVYVYKLNTEGMFEHEMTLR
PVNQTCCTAHSHASCTSVNKNEPCGARFGTSIAAVPDLNLDGFNDVVIGSPLENDHRGAV
YIYHGTEHTIREKYVQRIAAGGDGEKMKFFGQSIHGIMDLNDDGIIDVTIGGIGGAALYW
SRDVATLHAEMSFDPNKINVQQSTCQIHGKNTVCVKTKVCFRYKVKSEKEMNPKDPKTLI
HYTLTLDSLRALARGRFNGTDERKIQKNVIIRDSLCNELSFYMSDKLDFRDPLMVSLDFG
LVDVDSGPVLDGTLPTSLNKTLALVDCGNDEKCIADLHLQATPNVSSLVIKAYHEKFHVS
INIMNSGDNAYNTKVTLSTTENINYVKVEPKDKDCELNHTKAACAVGYPFLKSNVSEVFK
ILFEVNPSHIRKDIIINVTATTDSEERKSVLQDNFVQISIPVIYEASLTFTAKLSMKENH
ITLKEGETAPTVINDTSMIGEEMNISYTIERDAETQSPPLSLAITFPYMTQAKNILLYLT
RLTSSANIKCNALVNPENISQTKQFTHIAKAETLSDYLLSCKENANPCRSFSCDIPPARF
NQVNVTFRVWKQTFIHGEFSSLFLTVHAKLENKDKAFFQLSKSDENREVRVQISKESRGG
IPLWIIILSILIGLLILALVIFCLWKFGFFKRKSVEDMKEDMRDS
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgcgctctggagagcaatgcttaaggctcgcggcactgctcgtgctgccgtcgtgtttg
ttgtcctttaacgtggacgagaagaacgggatgtcgttcagcgggccgatagaagacatg
ttcggttacaccgtgcagcagttcaacaacagcgagggcaaatgggttctgattggttct
cctctgaagggacagccagcccagcggaccggagacgtctacaaatgccctgtgggtcac
ggcagttcttccagctgtataaaattagacctgcctgcgcacacaacaatcccaaatata
cacgaagttaaagagaatatgaccatgggcacgacgctggtggccaatccggatgggaac
ggatttctggcgtgcggtcctcagtacggctacatgtgtggaaatcagcagtacatcacg
ggcatctgctccaacgtcagctcctccttccaggtgctcaactctatcgccccgaccatc
caagactgtaagcaggacatggacatcgtcatcgtgctggatggatccaacagcattttc
ccttggaaacacatcacagaatttctggtcaagtttctcaaaaagatcgaaatccctcca
gccagggtgggcattgtgtcatacggagatgacgtcggccatgtttttaacctcagccag
ttctctaacacagaagacctggttaaaaacgcagctgggatcaaacagagacagggctta
aaaaccatgacagcgctgggaatcgatacagcgaggaaagaggcgttcactgtggagcga
ggagccagaccaggggtcaagaaagtcatggtgattgttacagatggagagtcacatgat
gactacagactgaaagacgtcgtcaaagactgtgaggaggatgggatcgagaggttcgcc
atcgctgttcttggtgattataaccgacaaaataaaagcaaagaggaagtgaataaattc
attgaacaaatcaagtccattgcgagcaataaaacagacgatcatttcttcaacgtggaa
gacgagcgggcactgatcaccatcgtcgatgctctagggagcaaaatctttgcattagaa
gctacgtctgggaatcacacgtcgtcttttgaaatggagatgtcccagtcaggcttcagc
gctcacacgtctaaagcaggtgtgatgctgggtgcagtgggagcgtacgattggaacggc
accgtcgtcatgcagtcgggtaatcagtttgtcgtgcccaaaaacaacatctttcacaac
cctctagtggagaggtaccaaggcatggccggatacgtgggttacgatgtgcagtcggca
tacacaccctctggagttctctacatcaccggagctcccagatacaaccacactggccga
gttattgtgtaccgcttcaacggggagaaggtcacggtcatgcagaacctcgaaggagaa
cagatcggctcgtactttggcagcgtcctccaaacgctggacgtggacggagactcatac
acagacctcctgctggtgggagctcccatgttcatggggcctgagagagacgagcaggga
caggtctacgtctacaagctcaacacggagggcatgtttgaacacgagatgaccctgcgg
ccggtaaaccagacatgctgcacggcgcactcacacgcttcctgtacgagtgtgaacaag
aacgagccatgcggcgctcgcttcggtacgtccatcgccgctgttcctgacctcaacctg
gatggctttaacgacgtggtgatcgggtcgccgctggagaatgaccaccggggggcagtg
tacatctaccacggcactgagcacacgatacgagaaaaatatgtccagcgcatagctgct
ggaggtgacggagagaagatgaagttcttcggtcagtccattcacggaatcatggactta
aatgatgacgggattatagatgtcactattggaggtatcggaggggctgcgctgtactgg
tctcgggatgttgccactctccacgccgagatgagcttcgatcccaacaaaatcaacgtg
cagcagtcgacgtgtcaaatccatggcaagaacacagtgtgtgtgaagaccaaagtgtgt
ttcagatacaaggtcaagtccgaaaaagagatgaacccaaaggacccaaagacattgatc
cactacactctgactcttgattctctgcgtgcccttgcgagaggaagatttaatggtaca
gatgagagaaaaatccagaagaacgtcatcatcagagactctctgtgcaatgaactctcc
ttctacatgtcggacaaattggactttagggatcctctgatggtgtctctggactttggg
ttagtggatgtagacagcggcccagtgctggatggaacgttaccaacatcactcaataaa
acgcttgctttagtagactgtggaaatgatgagaagtgcatcgctgatttacacctccaa
gctacaccgaatgtcagcagccttgtcattaaggcctaccatgagaagttccatgtcagc
attaacatcatgaatagtggagataatgcgtacaacaccaaggtcacactcagcaccacg
gaaaacatcaactacgtcaaagtggagcctaaagataaagactgtgagttgaatcatacc
aaggctgcgtgtgcagtaggataccctttcctcaaatccaatgtatcggaagtcttcaag
attctctttgaggtcaatccatctcacattcgcaaagacatcatcatcaacgtcactgcg
accactgatagcgaagagcgcaagtcggtgcttcaggacaactttgtacagatctccatc
ccggtgatatatgaagccagtctgaccttcactgcgaaactgagcatgaaggagaatcat
ataaccctgaaggagggagaaacagcaccgactgtcatcaacgacaccagcatgattgga
gaagagatgaacatcagttatacgattgagagagatgcagagacacagagtcctcctctc
agtctggccatcacgtttccatacatgacacaggcaaagaacatcctgctctatctgact
cgcctcacttcctcagccaatatcaaatgtaatgcgcttgttaaccctgagaacatcagc
cagacaaaacagttcacccatatagctaaagctgagacactcagtgactatctgttgagc
tgtaaagagaacgcgaacccctgcaggtcgttcagctgtgatattcctcctgccagattc
aaccaggtcaacgtcaccttcagagtctggaagcagacgttcatccacggcgagttttcc
agtctcttcttaacagttcacgctaaattggagaataaggacaaggctttcttccagtta
agcaaaagcgacgaaaacagagaggtgcgtgtgcagatctccaaagagtcccgaggtgga
attcctttgtggatcatcatcctcagtatcctcataggactactaatactggcactggtt
atattttgtctttggaagtttggcttctttaagagaaaatcagtggaagacatgaaggag
gatatgagagacagttaa
DBGET
integrated database retrieval system
