Pangasianodon hypophthalmus (striped catfish): 113544118
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Entry
113544118 CDS
T05759
Symbol
grin3a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3A
KO
K05213
glutamate receptor ionotropic, NMDA 3A
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04020
Calcium signaling pathway
phyp04080
Neuroactive ligand-receptor interaction
phyp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
113544118 (grin3a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113544118 (grin3a)
04082 Neuroactive ligand signaling
113544118 (grin3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113544118 (grin3a)
Ion channels [BR:
phyp04040
]
Ligand-gated channels
Glutamate (ionotropic)
113544118 (grin3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
DUF7124
DUF2107
Motif
Other DBs
NCBI-GeneID:
113544118
NCBI-ProteinID:
XP_026798561
LinkDB
All DBs
Position
Unknown
AA seq
1120 aa
AA seq
DB search
MPAPGIWDALGRSVLLLLLAPGALVLILTPACLLAHPQPCQILKRIGHTVRVGAVHLQPR
AVTHSSLRRKGLEWDWDADRETAWEQLELVRKSVSEQGARAVRTKGSTTKQQKGAKNVHK
HVESAFLPRDSILLAAETLNRLPNLLPYNLSLEIVIAVEIGLGELPAFSFSSSPPPVRSD
PMSFLQSVCHTVVVQGVSAIMAFPENRDEFIKLEFVSSSLHIPVISVVQHEFKRQSRNSL
HFQMAMQNPQTPQADLIYSLLSINNWYDVSLLMCQEQNISQFIFLLRNNSKFHLGSIVNI
STNISSKSDFQTSLQSHMTSIKDITSTIVTFGCDIRDIKRIFITIAKLGLVLPHYHWIIG
DSQNVEVLRTEGLPMGLMAHGQMRQPALDHYIQDSLEFIARAVGSAATVSPELALIPGIT
NCMVIEDKNLTSGKYLSRFMANTSFDGLSGYIHVQDGSTIISESHHFIWNLQHDPLGNPA
WTRLGSWKQGKVVLDYGVWPSKKRSHPGGDWRHSSKLHLRVVTLVEHPFVFTREVDDDGQ
CPAGQLCLDPLTNDTALLDALFHGLQSGNSTVPTELKKCCYGYCIDLLEKLAEDVGFDFD
LYIVGDGKYGAYKNGRWTGLVGDLLSGAAQLAVTSFSINSARSQVIDFTSPFFSTSLGIL
VRTRDTAAPIGAFMWPLHWSMWLGIFASLHVTAVFLTLYEWKSPFGMTPKGRNRDRVFSF
SSALNVCYAILFGRTAAIKPPKCWTGRFLMNLWAIFCLFCLSTYTANLAAVMVGEKTYEQ
LSGIHDPKLHHPSQGFRFGTVRESSAEDYVKKSFPEMHEYMRRYNVPTTPDGIDHLKDDP
QKLDAFIMDKALLDYEVSIDADCKTLTVGKPFAIEGYGIGLKQNSPLTSNISELVSQYKS
DGFMDMLHDKWYKVVPCGKRSFAVTETLQMGIKHFSGLFVMLCIGVTLSLLTTIAEHVVH
RWVIPKMQNKPQYWLHTSQRLHRALNPNFNEDKLSTVAKPEKRCNIGNNQQNLWNVCESS
VCPRRRLSNQEEQQNNLECLQCKELPPPPPVPPPPPQLKRQLPLQSNGKTDLLGLAHNPI
VQELTDLETHIQIIKQQLQLAMKKKKELEQYQRTSMAPES
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgccggctccggggatttgggatgcgctgggcaggtcggtgctgcttctgttgctcgcg
ccgggcgctttggtgctcattttgacgcccgcgtgcctcctcgcgcacccgcagccatgt
cagatcctgaagcggatcgggcacacggtgcgagtcggagctgtgcatcttcagccccgc
gctgtgacacacagctccctcaggaggaaaggactcgagtgggactgggacgcggacaga
gaaacggcctgggaacagctcgagttagtcaggaaaagtgtaagtgaacagggcgcgagg
gctgttaggactaaaggctctactacaaaacaacagaaaggagcgaaaaacgtgcacaaa
cacgtcgagagcgcgtttctacccagagactccatactcctggccgcggagacgctaaac
cggttaccgaacctgttaccctacaacctgtcgctggagatagtcatagctgtggaaata
ggcctcggagagctgccggctttctccttctcctcttcacctccacctgtgcgttccgac
cccatgtcgttcctgcagagtgtgtgtcacacggtcgtggttcagggcgtttcggccatc
atggcgtttcctgagaacagagacgagttcatcaagctggagttcgtgtcctcctcgctg
cacattccggtcatcagcgtcgttcagcacgagttcaagcgccagagccggaactcgctc
catttccagatggccatgcagaatccccagactcctcaggcagacttaatctactctctc
ctttccattaataattggtacgatgtgagcctgctgatgtgccaggagcagaatatttcc
cagttcatctttctgcttcgcaacaactcaaaatttcacctgggttccatagtcaacatt
tccaccaacatcagcagcaaaagtgactttcagacatccctgcagagccacatgacctcc
atcaaggacataacgtccaccattgtgacttttggatgtgatattcgggacataaagagg
atctttataaccatagcaaagcttggtttggtgctgccacactaccactggattataggg
gactcacagaatgtggaggtgttaaggaccgaggggcttccaatgggccttatggcgcat
gggcaaatgaggcagcctgctctggatcactacatccaggactctttggagtttattgcc
agggccgttggatcagctgccactgtgtctccagagctggctcttatccctggcatcaca
aactgcatggtgattgaggataaaaatctcacctcaggaaaatatctgtccaggttcatg
gccaacacatcatttgatgggctaagtggatacattcatgttcaggatggatctaccatt
atctccgaaagccatcactttatttggaatctgcagcatgatccattagggaaccctgca
tggacgcgacttggtagctggaagcagggtaaagtggtactggactatggagtttggcct
agcaagaaacgttcacacccaggtggtgattggaggcattcgtccaagttgcatctgcgg
gtagtgacactggtagagcatccctttgtattcacgcgagaggtggatgacgatggtcag
tgcccagcagggcagctgtgcctcgacccactcaccaacgacacagcgcttcttgatgcc
ctcttccatggcctgcagtctggcaacagcacagtgcccaccgagctcaagaagtgctgc
tatggctactgcatagacctgctggagaagctggctgaggatgtgggttttgacttcgac
ctctatattgtaggagacggaaagtacggtgcctacaagaatggccgctggacaggcttg
gtgggtgacctgctgagtggcgccgcacaactggcagtcacttcatttagcattaactca
gctcgcagtcaggttatcgacttcaccagtcccttcttctccaccagcctgggcatcttg
gtgaggacaagagacacggcagcacccattggcgccttcatgtggccattacactggagc
atgtggctgggcatctttgcatctctccatgttacagctgtattccttaccctgtatgag
tggaagagtccatttgggatgacacccaaaggccgaaacagggatcgtgtcttctccttc
tcttcagcactcaatgtttgctatgccatattattcggcaggacagctgccatcaaacca
cccaagtgctggacaggccgctttctaatgaacctttgggccatattctgtctgttttgt
ctctcaacgtacacagccaatctggctgccgtgatggtgggggaaaagacgtatgagcag
ctttcaggtatacacgaccccaagctccatcatccatcgcagggttttcgattcggaact
gtacgggagagcagtgctgaggattacgtgaaaaaaagttttccagagatgcatgaatac
atgaggcgatataatgttcctacaacacctgatggaatagaccaccttaaggatgatcct
caaaaactagatgcttttattatggacaaagccctcttagactatgaagtgtccattgat
gctgattgtaaaactctcacggtggggaaaccgtttgcaattgaaggctatggcattgga
ctcaaacagaattcgcctctgacttcaaatatctctgagctggttagccagtacaagtca
gatggatttatggacatgctgcatgataagtggtacaaagtggtgccctgtgggaaaaga
agttttgctgtgacagagactttacagatggggattaaacatttctcagggttatttgta
atgctgtgcataggagtgactttgtctctcctcaccactattgctgaacacgttgtccat
cgctgggtgatacccaagatgcagaacaagccacagtactggcttcatacaagtcaaaga
ttgcatcgagcacttaacccaaacttcaatgaagacaaattatcaactgttgcaaaacca
gaaaaaaggtgcaacattgggaacaaccagcaaaatctctggaacgtctgtgaaagctcc
gtttgcccacgtcgtcgcctttccaaccaagaggagcagcagaacaatctggagtgttta
cagtgtaaagagctccctcctcctcctcctgttcctcctcctcctcctcagctgaagaga
cagcttcctctgcagtcaaatgggaaaacggacctactgggcctggcacacaaccccata
gtgcaggagctgactgacctggagacccacattcagatcatcaaacagcagctgcagctg
gccatgaagaagaaaaaggagctggaacagtaccagagaaccagcatggcacccgagtcc
tag
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integrated database retrieval system
