Pangasianodon hypophthalmus (striped catfish): 113544175
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Entry
113544175 CDS
T05759
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
phyp00535
]
113544175
04091 Lectins [BR:
phyp04091
]
113544175
Proteoglycans [BR:
phyp00535
]
Cell surface proteoglycans
Others
113544175
Lectins [BR:
phyp04091
]
C-Type lectins
Others
113544175
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Jag_N
7tm_3
Motif
Other DBs
NCBI-GeneID:
113544175
NCBI-ProteinID:
XP_026798648
LinkDB
All DBs
Position
Unknown
AA seq
2386 aa
AA seq
DB search
MWQCVLRARSLLWKLLLLYVMINRTAKGASFFGDGFVQLKTVESSSKNSLHVRFRTSSAD
GLLFLAAGETDFLWVALQAGRIQVQIELGSGEHTLRSEKVALLNDLTWHSIELQHHDHNV
TLTVDKSSQSSLRMPGPDLELSIQDGLYVGGLENSDKLYLFNDISHVGFRGCLDEVLFNE
HNLLSSLRPYSGYKMVHEVSLGCSPQFSASVNDSISFFSSKAYMSLPMWEVPQEGMFECE
FYTSAEHGLLLYSSAGKGDYVALEIRHRRLVAVVRVDGSKTALSSITIVSEEGWHSVRLY
VAPRALQLTIGKEILNSSFGAKSRALQLNGPLFLGGVDANTFSEVRRNGLLSVVPKHISG
GSFKGCIRNIRVNDQNMGLPNAMVTKDVSIGCEPVKHVKPMTTTSPENLEPETPQLDKTK
TQTFLLLKDLEVLEGGRAPLDATHIKLNLEFRKLGIRQSQIMFRIEEQPVHGQLRLDVDP
KQQENTFSILDLWYSRVMYVHGGSEDPQDFFMFSVFTTSTNKVVPGYLKGSHLHRFNITV
TPINDAPELSLPEGNLFILLENCKRHLSMDMLRATDPDSNYTDLVFSLLGNLIANAGFLE
LDDNPGKPVTSFSYSDLEQGKVSFVHKGIKNSRMAIRVSDGEKVSNTVVLRIMAITLEYK
VVNNTGVDVIQGRASRVGSKHLAVQVNMAKQATDIRYDVLDPPVYGELQRLHSSGEWKQT
STFTQKLLEKDRLRYLSTFHGPQLKNVTDGFTCKISIGSVSTDKVLVHIRIRWIQYKVTR
SKMEVNDDRKVTLTPQEFRIVSKNVKLSENDIHVRLLTLPRRGVLIFNDKPLKKNSTFSQ
MNITNQKVQYKLFEKPNKDLRDMFSFQVFSEYSYSGRHNFRISIKADAHSVVLRNHGLSL
LEGESKIITKDNLFLFGSGAVHYTFRSSPQHGKVIQINNSSNNIVEFTNQDILEERILYV
HDDSETTHDAFTFCASASSLKDIEGIFNISIQLVNDQKPVRVVDKVFHVACDSQRLLTLE
DLCYHDPDSDYDDGQLLYTRRGIPMGELVLVNDTSHKLYQFHQRDLEEKRVLFVHRGASF
GRFVLFVSDGKHYTSTLLEVSAQDPYLKVANNTGLLVQKGQEVILQSVNFSVATNTDVRS
DEDILFEIFHPPSHGVLLCEGIEADAFTQYDLKVGHVVYRHDDGRNLVDSFSLTATVNGL
RLDVTVAVKVYLESHQKPPQLIHNHSVVVEEGKPVKIHKKELEVVHEDNTPDEIMYTVKT
PPSHGFLSRSHMDGENRYDGTVEKFSQWDINAGHIQYVQEKPGHTSDSFSLDVTNGIVTL
CDLVVFVDIIPFFLPLEVSNITLKEGSSIALTQDIIKITGQHFTELHVQYHVIEGPHHGH
IEHSRIPGVPIPSFTRVQVEHEFISYVHDGSETTADNFTLVANDTDVRKQSVPRVIHVNI
TPVNDEAPVITINRILRVWVDSVTEITSDDLSATDRDSAPESLEFIITPPSNGHLALKSA
PSRPVLNFTQAHIQRHQLVFVHSGALFGGFHFQVNDGVNFAPRQIFSIAARSLALSLERN
RELKVFPGSSKVISIEDLFIATNDYDDVHENRTIVYSVTSPPRLGKLIRAQDDNSTETKP
ISTFTQNMLKAGLVIYEHTEPIAWTATDSFIFTASSPPASFPPHTFNIHISYDNTSPEHR
SILLANTGAVVVEGSRIMIDKSKLDASNLLGKLPEEERDSYEIWYRVTTLPRFGTIVVGE
RNLTREKPDFSQFILNKYGITYVHDDSETTFDSFSFDVWLNLIGKPAQPPHEKDLMVSES
FNITVTPVNDLPPLLKTQAPSLLVVKGDTVALGPENLHVEDLDTSPEDIHYTVISKPNNG
FLALEGRLNESTVTFTQADVDEGRVHFVQEGNPTSGIFYFSVTDGFHRPLYKLFNLEVHN
VTINVVNNTGLTLVQGQTTGILTLHHLAAVTNKKNTTIKYHITMPPSHGRLMIKEDQITH
FDQEELWLGKVLYQMTDLSSSRDSFEFTVVASESNLTNQVFNITVKPLIHLGKQVRIPDG
IPVKIRKDVLDATELASISGSDPVFEIIVPPKYGKLVKVTVNLGNASESIESFTFRDVEQ
GRIAIQEHLNFLAVHGNTTVVVHNKTTSALEDSFVFLLKASNVQPARGEFVFMVVPYDPM
TGKHVSTAPVRPTIYPAFNRTSNVVSHMNEPSHMHPTKIPHWVPPKTKTRNRSGNHTRGK
STVSNAPKTTSVRHNDPPRNTPIRVESLPRPASDPLLIILPFLACLFLIVILVVLILVFR
HRQEKRAQPSMIQDLPENSVEDIVSPSPYLGQPERSLTVPSVVVTPLMPRCPRGPVLEPA
NNRALVPAITLPDSPMLVCPWTPMCPEGTQQSSPDTPTLRQNQYWV
NT seq
7161 nt
NT seq
+upstream
nt +downstream
nt
atgtggcagtgtgtcctgagagccaggagcctgctgtggaagctccttctgctttatgtg
atgataaaccgaactgcgaaaggagcctctttcttcggagatgggtttgtgcagctgaaa
accgtggagtcgtccagtaaaaactccctccatgtgcgatttcggacctccagcgcagac
gggctgctcttcctggctgccggggagacagatttcctctgggtggcgctacaggcagga
cgtattcaggtgcagattgaactcggatcaggtgaacacacccttcgctcagagaaagtg
gctctcctgaacgaccttacctggcactccattgaactccaacatcatgaccacaatgtc
accctgactgtcgacaaaagctcacagagcagtctgaggatgcctgggcctgatctggag
ctcagcattcaggacggactttacgtcggtggtcttgagaattcggataagctctacctt
ttcaatgatatatctcatgtgggctttcggggctgtctggatgaagtgctatttaatgaa
cacaatctgctttcatccttaaggccttactctggatataaaatggtccacgaggtgtct
ttgggctgcagcccacagttttcagcctctgtgaatgactcaatcagtttcttcagttcc
aaagcgtacatgtctctgccgatgtgggaggttccccaggaaggcatgtttgagtgtgag
ttttatacctcagctgaacatgggcttctcttgtacagctctgcgggcaagggggactat
gtagctttggagatacgacacaggcgcctcgttgctgttgttagagtagatggcagtaag
acagctttaagctcaataacaattgtgagtgaagaaggttggcactcagtgaggctctat
gtagcacctagggctcttcagttaaccattggcaaggagatcttgaattccagctttgga
gccaaatccagggctctccagctcaatggacccctcttcttgggtggagtggatgcaaac
acattttcagaagtacgtagaaatggtttgctctctgtagtaccgaagcatataagtggc
ggttcctttaaaggatgtattagaaatatcagagtcaatgaccaaaacatgggcctgccc
aatgctatggtgaccaaagatgtttctattggttgtgagcctgtgaaacatgtcaaaccc
atgaccacgacaagtccagagaatcttgaaccggagactcctcaattagacaaaacgaag
actcagaccttcttacttctcaaagatctggaggtcctcgagggtggacgagcaccactt
gatgcaacgcacattaagttgaacctggaattccgcaagcttgggatccggcaatcccag
atcatgttccgcatcgaggagcagccggtccatgggcagctgaggctcgatgttgatccc
aagcaacaggaaaataccttcagtattctggatctatggtatagtcgggtcatgtatgtt
cacggaggctcagaggatcctcaggacttcttcatgttttctgttttcaccaccagtacc
aataaagtggtgcctggttatttgaaggggagccacttgcacaggtttaacatcactgtc
acgcctattaacgatgccccagaactcagcctcccagagggaaacctttttattctccta
gagaattgcaagcggcatttgagcatggacatgctaagagctactgaccctgatagtaac
tacacagacctggtattctctctactcggtaacctaattgcaaatgctggattcctggaa
cttgatgataatccaggaaaacccgtgacctcgttctcctactcggacttggaacagggt
aaggtgagtttcgtccacaaaggcatcaagaactctaggatggccatcagagtgagcgat
ggagaaaaagtgagcaatacggtcgtgctgagaattatggccatcaccttggagtacaaa
gttgtaaataacactggcgtggatgtgatccagggtcgagcttctcgtgttggtagtaaa
catttagctgtgcaagtaaacatggccaaacaagcaacggatatccggtatgatgtccta
gacccacctgtctacggtgagctgcaacgactacattccagtggtgagtggaagcagact
agtaccttcacacagaaacttctagaaaaggatcgactcaggtatcttagcaccttccat
ggtccccaattaaaaaatgtaaccgatggcttcacatgcaaaatcagcattggctctgtg
tctacagacaaggttctcgttcatataaggatccgatggattcagtacaaagtcaccagg
agtaaaatggaggtgaacgatgatcgtaaagtcacgttgacacctcaggaatttagaata
gtatctaaaaatgtgaaactgtctgagaatgatattcatgtccgcttgttgactttacca
aggagaggtgtcttgattttcaatgacaagcccctaaaaaagaactctacttttagtcaa
atgaatatcactaaccaaaaagtacagtataaactttttgaaaagccaaacaaagacctg
agggacatgttcagctttcaggtgttttcagagtactcctattccgggaggcataacttc
aggatcagcatcaaagccgatgctcacagcgtagttctgagaaatcatggcctttccctc
ttggaaggggagagtaagatcataaccaaggacaatcttttcttgtttggctctggagct
gtacattacaccttcagaagcagccctcaacatgggaaagtaatccaaatcaacaactcc
agcaacaatatagtggagttcacaaaccaggacattctagaggaacgcatcttgtacgtt
cacgatgatagtgaaacaacacatgacgcatttacgttctgtgcttcggcatcatctttg
aaagacattgaaggcattttcaacatctccattcagttagtgaatgatcaaaaacctgtt
cgtgttgtagataaagtctttcacgttgcatgtgacagtcagaggctcctgacgttggag
gatctctgttaccatgaccctgattcggactacgatgatggacagctgctttataccaga
cggggaatcccgatgggtgagctagtcttggtaaatgatacctcgcacaagctttatcag
ttccatcaaagagacctagaggaaaagagagttctgtttgtccacagaggtgcgagcttt
ggacgctttgtactctttgtatctgacgggaagcattatacatcaacgctgctggaagta
agtgcccaggatccttatttaaaggtagccaacaacactggcctactagtccaaaaggga
caggaagtaattttacagtcagtcaacttcagtgtcgctaccaacaccgatgtccgaagt
gacgaggatatcctttttgagatatttcatcctccgagtcatggcgttctactttgtgaa
ggcattgaggctgatgctttcacgcagtatgacttgaaggtgggtcatgtagtctatcgc
catgacgatggcagaaaccttgtggactcctttagcctcacagctacggtaaatgggctg
cgcttggacgtgaccgtggcagtgaaggtgtacctcgagagccatcagaaacctccacaa
ctcatccacaaccactctgtagtggtggaagaaggaaaacctgttaaaattcacaaaaag
gagcttgaggtagttcatgaagataacacgccagatgagatcatgtacaccgtgaaaaca
cctccatcacacggcttcctgagccgttctcacatggacggagagaaccgttacgatggg
accgttgagaagttctcacagtgggacattaatgctggtcacatccagtatgtccaggag
aaacccggacacaccagtgactctttctcactggatgtcactaacgggattgtaacactc
tgtgatctggtggtgtttgtggatatcattcctttcttcctaccactcgaagtgtcaaat
ataaccttgaaagagggatcttcaatagctctaactcaagatataataaagatcacgggc
caacactttacagaacttcatgtccagtaccatgtgatcgagggtccacatcacggccat
atagagcactccaggatccctggggtcccgatcccatctttcaccagggtgcaggttgaa
catgagttcatatcgtatgtccacgatggcagtgagacgacagccgataatttcacgctg
gttgcaaatgacacggacgtccgtaagcagagcgtgcctcgtgtcatacacgtgaacatc
acgcctgtaaacgacgaggctccagttataaccatcaacaggatcctgagggtatgggtg
gattccgtcaccgaaatcaccagcgatgacctcagtgctactgaccgtgactctgcccct
gagagcctggagtttatcatcactccccccagtaacggacaccttgccctgaagagcgcc
ccctccagaccggtcctgaacttcacccaggctcacatccagcgccatcagctggtgttc
gtacacagcggtgccctgtttggtggatttcatttccaggtgaacgacggagtcaatttt
gcaccgaggcaaattttcagcatcgccgcccgatctctggcgctcagcctggagaggaac
cgtgaactgaaagtgtttccaggttcctcaaaagtaatttccattgaagatttgtttatt
gccactaatgactatgatgacgttcatgagaatcgcaccatcgtctattccgttacctca
cccccgagactgggcaaactgatcagggcccaagacgacaattccacagagacaaagccg
atatctacgttcactcaaaacatgttaaaggccggtttggtcatatatgaacacactgag
ccaatagcatggacagcgacagactccttcatctttactgcatcttcacctcctgcttcc
ttcccacctcacacttttaacatccacatctcctacgataacacaagtccggaacacagg
agcatcctactcgccaacacaggtgctgtagtggttgaaggcagtcggataatgattgat
aagtcgaagttggatgcctcaaatcttctgggaaagctacctgaagaagaacgagactcc
tatgaaatctggtaccgtgtcaccacactgccacgcttcgggacaattgttgtaggtgaa
cgtaacctgacacgtgaaaaacccgacttctcccagttcatcctcaacaaatatggcatc
acgtatgtgcacgatgactcggagaccacctttgacagtttcagttttgatgtgtggtta
aatcttatagggaaacctgctcagccaccccatgagaaagaccttatggtctcagagtct
tttaatatcactgtaacgcctgtgaatgatctgcctccattactcaaaactcaagccccc
agtctcttggtggtcaaaggagacactgtagccttaggtcctgaaaaccttcatgtggaa
gatctggacacttcacctgaggacatccactacactgtgatcagcaagcctaacaatggc
ttcctggccctggaaggtaggctaaatgaatctactgtcacatttacccaggctgatgtg
gacgagggaagggtgcactttgttcaagaagggaatcccacctcaggaatattctacttc
agtgttaccgatggctttcatcgtccactctacaagctctttaatcttgaagttcacaac
gtcacaatcaacgttgtaaataatactggattgactctagtgcaagggcagactacaggg
atcctgacacttcaccacttggcagcagtgaccaacaagaaaaacacaaccataaagtat
cacattacaatgccaccaagtcatggcaggctcatgattaaggaagaccagatcacacac
tttgaccaggaggaactttggttggggaaggttttgtatcaaatgaccgacttgtcatcc
tctcgagacagctttgagttcactgttgtcgcctctgaaagcaacctgaccaatcaggtg
ttcaatatcacagtgaaaccgctgatccaccttggaaaacaagtccggatccctgatggt
attcctgttaaaataaggaaggatgttttagatgccactgagctggcatccatcagtggc
agtgacccagtctttgaaattattgttcctccaaaatatggcaagctagtaaaggtaaca
gtgaacctaggtaatgcatcagagtctatagaatcctttacctttagggatgttgaacaa
ggcagaattgccattcaggagcaccttaactttctagctgtacatggtaacacaacagtt
gttgtgcataacaaaacaacatctgcacttgaagactcgtttgtgttccttttgaaagca
tcaaatgttcagcctgccagaggagaatttgttttcatggttgtaccttatgacccaatg
acaggaaaacacgtttcaacagcaccagtgcgtccaaccatatatcctgcttttaacaga
acaagcaatgttgtttcacacatgaatgagccatcacatatgcacccaaccaaaatacca
cattgggtacctccaaaaaccaagacacggaaccgttcggggaaccacacacgaggaaaa
tccacagtttctaacgcacccaagaccacatcagtcagacacaacgatcctcccaggaac
acaccgatcagggtagagtctctgccaagacctgcatctgatcctctgcttattattcta
cccttcctggcctgcctgtttcttatcgtcatcctagttgttttaatcttggttttcagg
cacaggcaagagaagcgggctcagccatccatgatccaagacctgccagagaactctgtt
gaggacattgtgtctccaagcccttatctgggacagcctgagagaagtctaaccgttccc
tctgttgtagtgacccctcttatgccacgatgtcctagaggccctgttttagagccagcg
aataatagggccttggtaccagcaataacactccctgactctccaatgcttgtctgtcca
tggactcccatgtgtcctgagggaacacagcagtcctctcctgatacaccaactctgaga
caaaatcagtactgggtttga
DBGET
integrated database retrieval system
