Pangasianodon hypophthalmus (striped catfish): 113544221
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Entry
113544221 CDS
T05759
Name
(RefSeq) prominin-1-A-like isoform X1
KO
K06532
prominin 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phyp04147
]
113544221
04090 CD molecules [BR:
phyp04090
]
113544221
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
113544221
CD molecules [BR:
phyp04090
]
Proteins
113544221
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prominin
Tweety
Exonuc_VII_L
SH3_14
DUF1218
Motif
Other DBs
NCBI-GeneID:
113544221
NCBI-ProteinID:
XP_026798696
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MMMMMMMMMVRMMMMMVMMVMCCWSLGSGAARGEPQAPHEDTLDFGFVPAVVYETHAHYE
PGAVDVLFHVVHAFLHTVQPNPFPADLIVRMLQQNMNGIKPEELQKPENIVLTLQAIYYE
IGFIVLAALGVVFVLLMPLVGLFFCLCRCCENCGGEMHQRHRKNADCQRGFYTVSLITSS
VFIAVGVLVAYTGSHNITSQIKSTKRLVSSNIKDLKSLASYTPAQIEYLTAQYTTAKNKV
LSNLDNIGPLLGGQIHKQLDRDVMPALDNVLRMAAAMRDTKEALENVSTSLETLQEATTK
LRRSLQSERSSLSNTLHDPACSSGNATHTCDNIRAALNRLAVSANFNGLPDVSPQLANLE
TVMETDLSYIVQKGYSAFNDTSRIVSEQTQDFVNTLPKVKALLDKSGAEIVAFTNTFPVE
PALENFTRFLTEAEKDIEALYPQIDQFDFYRWIGCVVLCCMVVLILAFNLLGLMCGMCGH
DKNTTPTTRGCLSNTGGNLLMAGVGFSFIFSWVLMGVVVTTFVTGGNVEKLVCEPLANRQ
LFMIIDAPYVVHPGKKNFLPGMLFQNHNIDLTIGSLYSDCYENNGIYSALQLENQFHFIQ
FVNRTVNNHNLAEIFEGVMVDLEGIILLEEEGKDNLINFANAGLGDINYEAYLSEVNKGV
TVVDLLSFANELEAEADHLPRGALGNALKGHASSIRQIHKEQVVPMEQAMSSLSQSIRLL
QTTVEELPTKVTNVLSAIDAAEYLIANNASHVVKKETDKYTKNLMGYLKQYVNWVQLSLT
MEVAQCKPISNIIDSLEIVGCSFIVDSVNTFWFGLGGCCLFLIPSIIMSVKLAKFYRRMD
TEDVFEDGTENWS
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatgatgatgatgatggtgaggatgatgatgatgatggtgatgatggtg
atgtgctgctggagtttgggctccggtgccgcgcgcggggaaccgcaggctcctcacgag
gacacgctggacttcggctttgtcccggcggtggtgtacgagacgcacgcgcactatgaa
cccggagccgtggacgtgctgtttcacgtagtgcacgcgtttctgcacacggtacaacca
aacccgttccctgcagatcttattgtcaggatgttgcaacaaaacatgaatggaatcaaa
ccagaggagctccagaagccggagaacattgtcctaacgctacaggccatttattatgag
atcggcttcatcgtgctggcagcgctgggtgttgtgttcgtgctactgatgccgctggtg
ggtttatttttctgcttgtgtcggtgctgtgagaactgcggaggcgagatgcaccaaagg
caccgcaaaaacgctgactgccaacgtggcttctatacagtctcgcttatcacgtcatct
gtgtttatcgcagtgggtgtactggttgcctacacaggaagccacaacatcacatcccag
atcaaaagtaccaaacgactcgtcagctccaacataaaagacctgaaatcactggccagt
tatacaccagcgcaaatcgagtatctgactgcgcaatacacaacagccaaaaataaagtt
ctctccaatctagacaacattgggccgttgttgggtgggcagatacacaagcagctggac
agagatgtgatgccagcgctagacaacgtactgcgcatggcagcagcaatgcgagacact
aaggaggctttagagaatgtgagcacatccttagagacgttacaagaagctactaccaag
ctgcggaggtctttacagtcggagcgcagttcactctcaaacacactccacgatccagcc
tgcagcagcggaaacgccacacacacgtgcgacaacatccgggccgcactcaaccggctc
gctgtcagcgccaactttaatgggctaccagatgtcagtcctcagttagcaaatctagaa
actgtgatggagacggatctcagctacattgtacagaagggctattctgcttttaatgac
acttccaggatagtgagcgaacagacacaagacttcgtgaacacactgcccaaagtgaag
gctttgttggataagtcaggagcagaaattgttgctttcaccaatacgttcccggtggaa
ccagcactggagaacttcactcggtttctgacagaagcagagaaggacatagaagcgctc
tacccacagattgaccagtttgatttttacaggtggatagggtgtgtggtgctgtgctgc
atggttgtgctgatcttggcttttaaccttctgggtttgatgtgtggaatgtgtggccat
gataagaacaccacacctacaacacgtggctgcctctcaaacacaggcggcaacctcctc
atggcaggcgttggctttagcttcatcttttcatgggtgctgatgggagttgtggtcacc
acttttgttactggaggaaatgtggagaagctcgtttgtgagcctctggccaacagacag
ctgtttatgatcatagacgcaccatacgtggtccatcctggcaaaaagaacttcctcccc
ggaatgctgttccaaaaccacaacattgatcttaccatcggcagcctgtacagtgattgt
tatgagaataatggcatatattctgcactacaactggagaaccaattccacttcatccag
ttcgtcaacagaaccgtgaataaccataatctggcagagatatttgaaggggtgatggta
gacttggaaggaataatcctgctggaagaagaaggaaaagataatctcatcaattttgcc
aatgcaggccttggggacatcaactatgaggcctacctttcagaggtcaataaaggagta
actgttgtagatcttctctcctttgccaatgaattggaggccgaggcagaccatctgccg
cgtggtgctctcggaaatgcactaaaaggccatgctagcagcatcagacagatccataaa
gagcaagtagtgcccatggagcaagccatgagctcattaagtcaaagtatcaggttacta
cagaccacagttgaagaacttcctactaaagtgactaatgtgctgagtgccattgatgca
gctgagtatctaattgccaacaatgcttcacatgtggtcaaaaaggagacagataaatac
acaaagaatctgatgggatacctcaaacaatatgttaactgggttcagctttcgttaacg
atggaggtagctcaatgcaaacccatcagtaacatcattgactcgttggagattgttggc
tgcagtttcatagtggactcagtgaacacattctggttcggtctgggtggctgctgtttg
ttccttatccccagtatcatcatgtctgtcaaacttgccaaattctaccgcagaatggac
acagaggatgtatttgaagatggcacagagaactggagttaa
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