Pangasianodon hypophthalmus (striped catfish): 113544348
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Entry
113544348 CDS
T05759
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113544348 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phyp03009
]
113544348 (nvl)
Ribosome biogenesis [BR:
phyp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
113544348 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_22
AAA_2
AAA_5
AAA_14
TIP49
AAA_33
Zeta_toxin
RNA_helicase
Mg_chelatase
AAA_28
Vps4_C
AAA_17
nSTAND3
AAA_18
Rad17
ABC_tran
Viral_helicase1
IstB_IS21
AAA_3
TsaE
ATPase
NACHT
Cytidylate_kin2
AAA_25
Sigma54_activ_2
DUF4404
Motif
Other DBs
NCBI-GeneID:
113544348
NCBI-ProteinID:
XP_026798922
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
MKNRSSGYIDQRLKQRVEQYLKSNNSQYVDVAEMAADLQQQYRLDYGRRNKTAFRIQVEK
VHRVICNESGLSALEEKHLAKRARRSKEDDGEDSSVLSDSTDSEADFSENENTNHMNNSL
MSLYCKGNPENGTRSKEQGTSSPNPASQKGSSAEGSSSSCTPHPSTTAVSAGGWFIDKTG
RKDQENILIDLCDEEAASPAVNKDTDLSVLEPERKPKKSKKKEKRKIQREGESKDVDADI
AESVMSKKARTKPPELQHSTVKFEDVGGNEETLTELCKLLIHMRHPEVYQQLGVVPPRGF
LLHGPPGCGKTLLAQAVAGEMELPILKVSAPELVSGISGESEQKLRELFEQAVSSAPCIL
FIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNSLSIPAQVLVIGATNRPDSLDPALR
RAGRFDREICLGIPDEGARLKILNTLCRKLKLPADFDFAQLARLTPGYVGADLMALCREA
AMTAVNRVLLQQLETGTMCQNITDVQNDLSAKPQDMSMSSDVAEESGQASDDLSAQQGEL
EQLLSLLRNSKSLSEEQLADLCIVMDDFRASLARVQPSAKREGFATVPDVTWDDIGALQD
IREELTMAILAPVRSPEEFKALGLSAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKG
PELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSGHESGASVRVVNQLLTE
MDGLETRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPPEDRHAILLTITKGGTKP
RLDLDVILEEIAHDERCDCFTGADLSALVREASVNALRAHLYSQTALAHTGHTFSSSSVK
DIRVSRQNFEDAFKKVRPSVSKKDQLMYEKLRESLTR
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacagaagtagtggctacatagaccagcgactcaaacagagagttgaacagtac
ctgaaatccaacaacagtcagtatgttgatgtggctgaaatggccgcagaccttcagcaa
cagtacaggctagattatggccgaaggaacaaaacagcttttaggatacaagtggaaaaa
gtgcacagggtgatatgtaatgagtctgggctctcagcactggaagagaaacacttggct
aaaagagcaagacgcagtaaagaggatgatggtgaggacagcagtgtgttgagtgacagc
acagacagcgaggcagatttctctgaaaatgagaacaccaatcacatgaacaactcgctg
atgtccctgtattgcaaggggaatcctgagaacggaacccgttcaaaggagcagggcacc
agtagcccaaatccagcctctcagaagggttcatcagctgagggcagcagtagcagttgt
acccctcatccctccaccaccgctgtgtctgcaggcggctggttcattgataagacagga
agaaaagatcaggaaaacatcctgattgacctgtgtgatgaggaggcagccagccctgct
gtcaataaagacactgatttgtcagtgctggagcctgaaaggaagccaaagaagagcaag
aagaaagaaaaaagaaaaatccagagagaaggagaaagcaaagatgtagacgcagacatt
gcggaaagcgtcatgtcaaaaaaagcccggaccaagcctcccgaacttcaacattccaca
gtgaagtttgaagacgttggcggcaatgaagaaactctgacggagttgtgtaaattgctc
atccatatgcgtcatcctgaagtgtaccaacagctaggagtggtgcctccccgaggtttc
cttcttcatgggccgcccggctgtggaaaaaccctcctcgcccaagctgttgctggggaa
atggagttgcccatactgaaggtctctgctccagagctggtgtcgggcatttcaggggaa
tcagagcagaaactacgggagctgtttgagcaagctgtgagcagtgctccctgcattctg
ttcattgatgagattgacgccatcaccccaaagagagaggtggcctccaaggacatggag
aggcgaattgttgctcagttactcacctgcatggatgacttgaattccttaagcatccca
gcacaggtcttggttattggagccaccaaccggcctgattctctagatccggctttgaga
agagcaggacgttttgacagagaaatctgtctgggaataccggatgaaggagcacgtctc
aaaattcttaatactctttgtcggaagcttaagctgccagcagactttgactttgcacag
ctggcacgactcacacctgggtacgttggtgcagatctgatggcactgtgccgtgaggca
gccatgactgctgttaaccgtgtcctgctgcagcagctcgagactggcaccatgtgtcag
aacatcactgatgtccagaatgatctcagtgcaaagccccaagacatgagcatgtctagt
gatgtggcagaagagagtggccaggcttctgatgatttaagtgcacagcagggggagcta
gaacagctgctttctctgctgaggaacagcaagtctctgagcgaggaacagcttgctgat
ctctgcattgtcatggatgacttcagggcgtcactggcacgggtccaaccatctgccaag
cgtgaaggcttcgccactgtgcctgatgtcacctgggatgatatcggtgcactgcaagac
attcgcgaggaactcactatggccatcttggctcctgtacgtagtccagaggagttcaaa
gctctgggattgagtgcccctgcaggagtgctgcttgctggacctccaggctgtggaaaa
acccttcttgcaaaagctgttgctaacgagtctggtttaaactttatttccgttaagggc
cccgagctactgaatatgtatgttggtgaaagtgagcgggcagtacgccaggtgttccag
aggggacgaaactccgcaccgtgtgtgatctttttcgatgagattgatgccctttgcccc
cgacgttcgggccatgagtctggagccagtgtgcgcgtggtgaaccagttgctgactgag
atggacgggttggagacacgccgccaggttttcatcatggctgccaccaaccggccagat
atcattgatccagcagtgcttcgaccaggccgtttggacaaaacgttgtacgtgggtttg
cctccgccagaagacagacatgccatattgctcactattactaagggaggaactaagcct
cgtctggacttggatgtaatcttggaggaaattgcccatgacgaacggtgtgactgtttc
actggggcagacttgtctgcgctagttagagaggcttctgttaatgctttaagagcccac
ctctactctcaaacagctcttgcacacacagggcacacattctcgtccagctctgttaag
gacatacgggtcagcaggcagaattttgaagatgctttcaagaaggtgcggccatctgtg
tccaaaaaggaccagctgatgtacgagaaactgcgagaatctctcaccagatag
DBGET
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