Pangasianodon hypophthalmus (striped catfish): 113544437
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Entry
113544437 CDS
T05759
Symbol
xpo5
Name
(RefSeq) exportin-5 isoform X1
KO
K14289
exportin-5
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113544437 (xpo5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phyp03016
]
113544437 (xpo5)
03036 Chromosome and associated proteins [BR:
phyp03036
]
113544437 (xpo5)
Transfer RNA biogenesis [BR:
phyp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
113544437 (xpo5)
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
113544437 (xpo5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
113544437
NCBI-ProteinID:
XP_026799069
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MAEPVAAMCEQLIKAVTVMMDAESNQRYRLEALKFCEEFKEKCLYCIPCGLQLADKSQAA
VVRHFGLQILEHVIKFQWNNMPQQEKVHLKDCTMEMLTSGTYPILEEESHIKDALSRIVV
EMIKREWPQQWPDMLKEMETLTTYGDTQTELVMLILLRLAEDVITFQTLPQQRRRDIQHT
LTQNMDSIFNFLLTILQQHVDEYRKLKIIPGQELKAKAHCRVGVTTLNTLAGYIDWVALV
HITNNSCHLLEILCLLLSEPELQLEAAECLLIAISRKGKLEDRKPFMVLFDDVAMHYILS
AAQSVEVGLSEMRYTFLKRLCQVLCALGSQLCALVGSPAEVEVPANLNKYMEAFLAFTTH
PSQFLRSCTQTTWGNMFRHEVLSKEPVVIQMAVKYLNATMTNLVKSGFPSKNDSPACEYA
RVDFDSDEDFNAFFHSFRAQQGDVIRHSCKIAPLEAFQIAGEWLQYQINSALNTGNALSK
TGEGMCSTFSPAAVKWEAMTFFTESVMGQLFKVLDKEKLPVDQGMELLHAVVNYETRDPV
ILSCILTNLSTLFPFVLHRPEVLPQVFFKLFPAITFELVEESKAPRTRAVKNVRRHACSS
IIKMCRDYPEFILPCFDMLYTRVKELFSNELLLTQMEKCALMEALVLISNQFKDYNKQKA
FLVELVGPVTARWLSEEMRSVLSDPASFITFIGADQANSEPGAEDQMGINRSRVSFCVYT
ILGVVKRARWPADVEEAKAGGFIVGYSPAGAAIYRNPSTEPLLALLPNLLTLIRTHNSLF
LPENLSRLSETFSRAYDVMDVEKNLILGIPQQLLDVYDSPVYRSALERMQGFFCTLYDNC
YHVLGHAGQALLQDFYTIEGLAEQLVGTALIHLEHVPDHRLRPLLRVFMKPLVTSCPPEY
YESLLCPLLGLLFSHLLQRLNLRWQIINQRTSMCGPDDDEAYEENQVSQEMLEDRLVRLA
TREVMDLLCASCISRKMPESAANREDADGDEEMMATDSSQLNASHASDELTELGKCLLKH
EDIYMNLLAISFNSLSWRDTTNCQRAATLICWTLLRQVVGANLLPDAVTWLYTRVLSGLQ
MHGQHEGCNAALTQLALLIYDALRPQYAELRSIMNQIPNVQPDLLEQFDQKTINPASQKV
GEKKRKDQFKKLIAGAVGKPLGQQFKKEVHIRNLPSLFKKVKPNKDIVANSENAGLVALF
SPEHDDH
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atggcagagccggtggccgcgatgtgcgagcagctgattaaggctgtgaccgtcatgatg
gacgcggaatccaatcagcggtaccgcctggaggctctgaagttttgtgaggaattcaaa
gaaaaatgtctgtattgtataccatgtggccttcagttagcagacaaatcccaggccgcg
gtggtgagacattttggtctacaaatactggagcatgttataaagtttcagtggaacaac
atgccacagcaagagaaagtccatttgaaagactgcaccatggagatgctgaccagcgga
acgtatcccatcttggaggaggagagtcatattaaagacgctctgtcgaggattgtggtg
gagatgatcaagagagagtggcctcagcagtggccagatatgctgaaagagatggaaaca
ctcactacatatggggacacgcagacggagctggtgatgctgatcctgctgcggctggcc
gaggacgtgatcacgttccagactcttccccagcagcgccgtagagacatccaacacaca
ctaacgcagaacatggacagcatcttcaacttcctcctgaccattctgcagcagcacgtc
gacgagtacaggaaactgaaaataattccaggacaggagttaaaggccaaagctcattgt
cgagtcggcgtgaccaccttaaacactctggccggctacatagactgggttgcgctggtt
cacatcacaaacaacagctgccatttactagagatcctgtgcttactcctgagtgaacca
gagcttcagctggaggctgctgagtgtctgctcattgcgatcagcaggaaaggcaaactg
gaagacaggaagccattcatggtgctctttgatgacgtggccatgcactacatcttgtcg
gccgcccaatcagtggaagtggggctcagcgagatgagatacaccttcctgaagaggtta
tgtcaggtgctatgtgctctaggcagtcagctctgtgccttagtgggctcgcctgcagaa
gtggaggttcctgctaacctgaataaatacatggaagcgttcctcgccttcactactcac
cccagtcagtttcttagatcttgcactcagaccacctggggaaacatgttcagacatgaa
gttttatctaaggagcctgttgttatacagatggctgttaaatatttaaacgcaaccatg
accaaccttgtgaagtcgggattcccatcgaagaacgacagcccggcttgtgaatacgcc
cgtgtggacttcgacagcgacgaggacttcaatgctttctttcattcttttcgggcccag
cagggtgacgttattcgtcattcttgtaagattgctcctcttgaagccttccagattgct
ggggaatggttacagtatcagatcaactcggccctcaacactggaaatgctctgtctaaa
acaggagaagggatgtgctcgacgttttcacccgcagctgtgaagtgggaagccatgacc
tttttcacagagagtgtgatgggacagctttttaaagtcctggataaggagaagctgcct
gttgatcaaggcatggagctgctgcacgccgtagtgaactacgagacgcgggatcccgtc
atcctgtcctgcatcctcaccaacctgtccaccctcttcccctttgtcttgcatcgccca
gaagttctacctcaagtgttctttaagctgtttcctgctatcacattcgaactggttgaa
gaaagcaaggctcctcgaacccgagcggtgaagaacgtcagaagacatgcctgctcatcc
atcatcaagatgtgtcgagattatccagagtttatactgccctgctttgacatgctttac
actcgagtgaaggagctcttctccaatgagctgctgctgactcagatggagaagtgtgca
ctcatggaggccctggtgctgatcagcaaccagtttaaagactacaacaagcagaaagcc
ttcttagtggagctcgtgggccctgtaacggcacgctggctctccgaggagatgcgcagc
gtattgtcagatccagcaagctttattacgtttattggtgctgatcaggccaacagtgaa
cccggcgctgaggatcagatgggaatcaacaggtcaagggttagtttttgtgtgtacacc
attctgggcgtggtgaagcgagcacgctggcctgcggatgtggaggaagccaaagccggg
ggtttcatagtgggctactctcctgctggagcggccatctacagaaacccctccacagag
cccctgctggcgctgcttcccaatctgctcaccctcatcaggacccacaacagcttattt
ctaccagagaacctatctcggctcagcgagaccttcagccgggcgtatgatgtcatggac
gtggagaagaatctcattttaggaatcccccagcaactgttggacgtgtacgactctccg
gtgtacagaagcgcactagagcggatgcaaggcttcttctgcacactctatgacaactgt
taccatgtgctagggcatgctggccaggccttgctgcaggacttttatacgatagagggg
ttggccgaacagttggtaggcactgccctcattcacctggagcacgttcctgaccatcgg
cttcgccctttgcttcgggtgttcatgaaaccgctggtcacttcctgtcctccagaatat
tacgagagtcttctctgtccactgctcggccttctgttttctcacctgctgcagagactg
aaccttcggtggcagatcatcaaccagaggactagcatgtgtggtccagatgatgacgag
gcatatgaggagaatcaggtgtctcaggagatgctggaagatcggctagtgcgcttggcc
acgcgagaagtcatggatctcctctgtgcatcgtgcatatcgagaaagatgcctgaatca
gcagcaaacagagaggatgcagatggggatgaggaaatgatggcaaccgattcttctcag
ctaaatgcgtcacatgcttcagatgagctcaccgaactgggcaagtgtctccttaaacat
gaggacatctacatgaatctgctggctatctcgtttaactccctgtcatggagggacacc
actaactgtcagcgggccgctaccctgatctgctggactttgctgagacaggtggtgggt
gcgaatttgctcccagatgccgtgacgtggctgtacaccagagtgctgagcggtctgcag
atgcatggccagcatgagggctgcaacgccgcactaacgcaactcgccctgctcatctat
gatgctctgcggcctcaatatgcagagctgcgttccatcatgaaccagatccccaatgtt
caacctgacctgctagagcagtttgatcagaaaaccatcaaccctgcatcgcagaaagtt
ggcgaaaagaagagaaaagaccagtttaagaagctgatcgcaggagctgttgggaaacct
cttgggcagcagtttaagaaagaggtccacatccgaaaccttccctcgctctttaagaag
gtgaagcctaacaaagacattgtggctaacagcgagaatgctggattggtcgctctcttt
tcacctgaacatgatgatcattag
DBGET
integrated database retrieval system
