Pangasianodon hypophthalmus (striped catfish): 113544466
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Entry
113544466 CDS
T05759
Name
(RefSeq) splicing factor, arginine/serine-rich 15-like isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113544466
03041 Spliceosome [BR:
phyp03041
]
113544466
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113544466
Spliceosome [BR:
phyp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
113544466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
113544466
NCBI-ProteinID:
XP_026799087
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MEAVKAFNIEMASMLDTKPPISRAKMMSITKAGMKAIKLYKHVVQIIEKFIKKCNPELKV
PGLYVVDSIIRQSRHQFGEDKDVFGPRFLKNISATFQSLYECPPDDKDKILRVLSLWQKN
SVFSMDVIQPLMDMASAPVVAVMENGGTLGGSPAEAVCVQPTPEPSTLPVSQNAADQQNN
VTLAAVAQFLQSAQGLDLQQILRTLQQGGATQANTANSASTANTANMANTAPAQQNSSIS
KVLQDRFEYDEEPDVEEPQQMEMFPASSIKLADLQHALQGRHLSNQALPLTQIEQIVTKP
DNSTTRAIAEPHTAESGHSRRDDRERRYSRRSRSRSPRRRSSSRSRSHSRHSRYRRSRSR
SRERRRSPPRSRAEDRREMERRNKGFPPVKRETLSVCSTTLWLGQLDKKTQQQDVSSLME
EFGQIESINMIPPRGCAYIVMVHRQDAYTALNKLSRGNAKINHKSFKIAWAMNKGVGGRF
KKHWNMELGVTYIPWEKLKDAEIVGLREGAVLDQETLKPEWASMLAELVKPVGDGGEGPE
REREGGAAVASQVSAVSTESGVERTHTLPVDPVEPPSENSISGPGNQTGPLPLNHPPVPF
MPPFPNVLRPPPNLPPPNVPRAPMFRIRLPMPGPSDPAEEFPHPGIMEAERWNNRPFRND
WQENGPPRGPPEWSGPEPPFRHSGWSRGGHWGHGQFRN
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggtgaaagctttcaacattgagatggcgtccatgctggacacgaagccgccg
atctctcgagcgaaaatgatgtccattaccaaagctgggatgaaagcgattaagctttat
aaacacgttgtccaaatcatcgagaagttcatcaagaagtgtaatcccgagctgaaggtt
cccggtctctacgtggtggattcgattatccgacagtcccgtcatcagttcggagaagat
aaagacgtgttcgggccgaggttcctgaagaacatcagcgccacctttcagagcctttac
gaatgtcctcctgatgataaggataagatcctgcgtgtgttgagtctgtggcagaagaac
tcggtgttcagtatggacgtcattcagccgctgatggacatggcgtcggctccggtggtg
gctgttatggagaatggtggtacgctgggaggttctccagccgaagcagtgtgtgttcag
ccaacgccagaaccgtccacacttcctgtatctcagaacgcagcagatcagcagaacaac
gtgacgctcgctgctgtggctcagtttctccagtctgctcagggcctcgacctccagcag
attctgcggactctccagcagggaggagctacacaggctaacacggctaacagcgctagc
acggctaacacggctaacatggctaacactgctcctgcccaacagaatagctcaatctct
aaggtgctgcaggaccgattcgaatatgatgaggaaccagatgtcgaggaaccacagcag
atggaaatgtttcccgcttcctccataaaacttgcagatctgcagcacgctcttcagggt
cgccacctttccaaccaggcgcttcctctcacgcagattgaacaaattgtgaccaaacct
gataactccaccactcgcgccatcgcagaaccccacacggctgaatcaggtcactccagg
agagatgaccgagagaggaggtacagcaggaggtcacggtcaaggtcacccaggcggcgc
tcgtcgtctcgttctcgatctcactcgcgacattcgcggtaccggcgctctcgctctcgt
tcccgcgagcgtcggaggagtccgccgagatcacgcgccgaggacaggcgagagatggag
aggagaaataaaggattcccgcctgtgaagagagagactctgagcgtgtgcagcacgact
ctgtggctcgggcagctggataagaaaacgcagcagcaggacgtcagcagtctgatggag
gagttcggccagatcgagtccatcaacatgatccctcccagaggctgcgcctacatcgtc
atggttcacagacaggacgcctacaccgcgctgaataaactgagccgaggaaacgccaag
atcaaccacaaatccttcaagattgcgtgggcgatgaacaaaggtgtcggaggtcgcttt
aagaagcactggaacatggagctgggcgtgacctacatcccctgggagaagctgaaggac
gcggagatcgtgggtttgcgggagggagcagtgctcgaccaggaaacactcaaaccagag
tgggcctcgatgcttgccgagcttgttaaacccgtcggagacggcggcgagggacctgaa
cgagaacgcgagggcggagctgcagtcgcgtcacaggtgtctgctgtaagcacagagtct
ggcgtcgagcgcacacacaccctgccagtcgaccctgtggagcctccgtcagaaaattcc
atcagcggtcccggaaaccagacaggaccgttacctctaaatcatcctccggttccattt
atgcctccgtttcctaacgtcctgcgtcctccacccaatctgcctccacccaatgtgccc
agggctcccatgttcaggatcaggttgcccatgccgggtcccagcgatcccgctgaagag
tttccacatccgggcatcatggaagctgagcgctggaacaacaggcctttcaggaacgac
tggcaggaaaacggaccgcccagaggaccccccgagtggtccggcccggagcctccgttc
aggcacagcgggtggagcagaggaggtcactggggtcacggacaattcagaaactga
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