Pangasianodon hypophthalmus (striped catfish): 113544550
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Entry
113544550 CDS
T05759
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113544550 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phyp01002
]
113544550 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113544550 (usp16)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113544550 (usp16)
Peptidases and inhibitors [BR:
phyp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113544550 (usp16)
Ubiquitin system [BR:
phyp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113544550 (usp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Vfa1
Motif
Other DBs
NCBI-GeneID:
113544550
NCBI-ProteinID:
XP_026799189
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MGRRRAKDRGRSPKEDSSVDLTGVTCVHIRKGTDPSWLRKTSLDKSWATCEVCEVEEETE
TETETENEDGRDAPAIWMCLKCGHRGCGRFSENQHAIKHYETPRSDPHCLVLSLDNWSVW
CYICNDDIHYSSTGQLAQLISNIKKQMLGESRHKAATRSTSLKEEAKEEKNTSSDTVQEN
EVENEQEKKEEQKENKKCVKQNGQETQSSTVPVRGLSNLGNTCFFNAVLQNLSQTWLLRQ
LLSDFRDEEKSVLITPSSSSDLDPLQVRLPRPGSLTLAMCQLLNEIQQTKKGVVTPRELF
TQVCKKAARFKGFQQQDSQELLRYLLDGMRAEESVRVTAGILNALKSSGKTSEPEQKKLV
KEYESNGGTKSFVDRVFGGELTSTVMCTECKTVSVVTEVFLDLSLPVADEAYRKKKGGGQ
QKKSESLESGRSVETPLTNGNEDMPTGTGSKYQQKKAKKQAKKQAKTQRRQQKQGAKLTL
DLLTNQCEDTSPEAPPPSTNGQPEAETERLADELISQSEPAEQNQEVPADEEVEDDEEVS
EAQNSASNRFISLSEEGTEKQEVEEEDEREEAELIKSVRALSVSEDQQSKEVEPEVESGA
ESELEFGAEPGFVVVNADPKAAFSTLSSRAALNTSESSVESSLHQFTQVEQLTHTNSLLC
VTCSRRAAHGGKKKVYTEAMKQMLISSPPPVLTLHLKRFQQVGYSVCKVNRHVQFPQVLD
LGPFCSAKCKGVEEGQTQLLYSLYGIVEHSGTMRSGHYTAFVKARPHTHTSSGLLNGAAG
DETPPKGSWFHISDSSVQPVTEARVQTSQAYLLFYERIS
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggggaggagacgagccaaagacagaggcaggagtcctaaagaggacagctctgtagat
ctgacgggtgtgacgtgtgtgcacatccgtaaaggaacagacccgagctggctgaggaag
acgagcctggacaagagctgggccacatgcgaggtgtgtgaggtggaggaagagaccgag
accgagaccgagactgagaacgaagacggacgagacgcgcctgcgatatggatgtgtctc
aaatgcggtcacagaggttgtgggaggttctcggagaaccaacacgccattaaacactat
gagacgccgcgttcagatccgcactgcctggtgctcagcctggacaactggagtgtgtgg
tgttacatctgcaatgacgatatccactactccagcacgggacagctggctcagctcatc
tccaacatcaagaaacaaatgctgggcgaatccagacacaaagccgccacgaggagcact
tctctcaaagaagaagcgaaggaagagaagaacacttcaagtgacaccgtgcaggaaaac
gaggttgaaaacgagcaggaaaagaaagaagagcagaaagaaaacaagaagtgcgtgaag
caaaacggccaagaaacacaatccagcaccgtgcctgtgcgaggcctcagcaacctcggc
aatacgtgtttcttcaatgctgtgctgcagaatctatcgcagacttggctgctgcgtcaa
ctcctcagtgatttcagggacgaagaaaagagtgtgttgatcacaccatcgtcatcctcc
gatctagatcctttgcaggtgcggttgccgagacccggctctctcacgctggccatgtgt
cagctcctcaatgaaatccagcagaccaaaaaaggcgtggtgacgccgcgcgagctcttc
acacaagtgtgtaaaaaggcagcaagatttaaaggcttccagcagcaggacagtcaggag
ctcctgcgctacctgctggacggaatgagagccgaggagagcgttagagtaactgctgga
atcttgaatgcgctgaaaagttcgggcaaaacctccgagccagagcaaaagaaattagta
aaagaatatgagagcaacggcgggacgaagagttttgtggatcgtgtgtttggcggagag
ttgaccagcactgtgatgtgtacggagtgtaagacagtttccgtggttaccgaagtgttt
ctcgacctctcgctacctgtggctgatgaggcttacaggaaaaagaagggtggcggtcag
cagaagaagagcgaaagcttggaaagtgggcggagtgtcgagactccgctgaccaatggg
aatgaagatatgccgacgggcacaggaagcaagtaccagcaaaagaaagccaagaagcag
gcgaagaaacaggctaagacccagcggcgtcagcaaaagcaaggtgcaaagctcacgctg
gatttactgaccaatcagtgcgaagacacttctccagaagccccgcctccgagcacgaac
ggacagccggaagctgaaactgaacgtttagcagacgagctcattagccaatcagagcct
gcggaacagaatcaggaggtgcctgctgatgaagaggtagaggacgatgaagaagtgagc
gaagcacaaaactccgcctctaatagattcatcagcctatcagaagagggaacagaaaaa
caggaagtggaagaggaagatgagcgcgaagaggcggagctaattaagagcgtgagagcg
ctgtcggtctccgaggatcagcagagcaaagaggtggagcccgaggtggaatcgggggcg
gagtcagagctggagtttggggcggagccagggttcgtggtggtgaatgcggacccgaag
gctgcgttctcaactctgtccagcagggcggcgctgaacacctcggagagctcagtggag
tcgagcctccatcagttcacacaggtggagcagctgacacacaccaacagcctgctgtgt
gtgacctgcagccggagagccgcacacggcggtaagaagaaggtatacacagaggcgatg
aagcagatgctgatctcatcccctcctcctgtactcactctgcacctgaagaggttccag
caggtgggctacagtgtgtgtaaagtcaacagacatgtacagtttcctcaggtgctggat
ctcggcccgttctgctctgccaaatgcaagggggtggaggaaggacagacgcagctcctc
tactccctgtacggcatcgtggagcacagcggcaccatgcgctcgggtcactacacagca
ttcgttaaagcccgacctcacacacacactagcagcggtttgctaaacggagcggcaggt
gacgagacgccccctaaaggctcgtggttccacatcagcgacagcagcgtgcagcccgtc
acagaggcccgagtgcagacttcccaagcctacctgctcttctacgagaggatctcttaa
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integrated database retrieval system
