KEGG   Pangasianodon hypophthalmus (striped catfish): 113544666
Entry
113544666         CDS       T05759                                 
Name
(RefSeq) WD repeat-containing protein 20-like
  KO
K24731  dystrophia myotonica WD repeat-containing protein
Organism
phyp  Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:phyp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:phyp04990]
    113544666
Domain-containing proteins not elsewhere classified [BR:phyp04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   113544666
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I WD40_Prp19 WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_VPS8 Tricorn_2nd Beta-prop_EML WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd
Other DBs
NCBI-GeneID: 113544666
NCBI-ProteinID: XP_026799408
LinkDB
Position
Unknown
AA seq 650 aa
MAGDGGALKDINEIKSQFRTREGFYKLLTLSDSQQRAGLARGPGAGGAAAGAASIPGGGG
GVVPGPGGSSPASAGFLPPVRVSMVKLQPEDPSEESERVCFNVGRELYFYTYTNIKKAVD
LSKPIDKRIYKGTQPTCHDFNQYSATADSVALIVGFSAGQVQYLDPIKKETSKLFNEERL
IDKTKVTCLKWLPKSENLFLASHASGHLYLYNVEHPCGTTAPQYSLLRQGEGFAVYACKT
KTPRNPLLRWAVGEGGLNEFAFSPDGVHIACVGQDGCLRVFHFDSMELHGVMKSYFGGLL
CVSWSPDGKYLATGGEDDLVTVWSFAESRVVARGHGHKSWVNVVAFDPFTTSLEEEEPME
LSGSEEDLHQGQGALNFGRVRTSSTLSRLSRHSSKGGGPSVSYRFGSVGQDTQFCLWDLT
DDVLYPRLPLSRALTNTFGSNAPPSISAGLNSTSGSGGVEGHHHPSNTHQTASLPLPLPR
SLSRSNSLPHPAVANASKGQGGTESGGTGGSGGGSSAPFSIGRFATLSLQERKSDKSATG
GDKEHKRYHSLGNISKSNDKINVAPRSNRLDASKVLGTTLCPRMNEVPLLEPLVCKKIAH
ERLTVLVFMDDCIITACQEGLICTWARPGKMHSSQPLSTQNGNSPSGTVV
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggccggcgatggaggcgctctgaaggatattaacgagatcaagtcgcagttccgcacc
agggagggtttctacaagctgctcacgctctcggactcgcagcagcgggccggattagcg
cgcggtcccggcgctggaggtgccgcagccggtgccgcctcgataccggggggcggcggc
ggtgtggtcccgggacccggcggctcctctccggcttcggcgggcttcctgcccccggtg
cgggtctccatggtgaagcttcagccggaagacccgagcgaggagtccgagcgagtctgc
ttcaacgtcggccgcgagctctatttctacacgtacaccaatattaaaaaggcagtggat
cttagtaagcctatagataagcgtatatataaagggacgcaacccacgtgtcatgacttt
aatcagtattcagcgactgcggacagtgtggctctcatcgtgggcttctcggcaggccag
gtgcagtacctggaccccatcaaaaaagagaccagcaagctcttcaatgaagagagatta
atagacaaaactaaagtgacctgtctcaagtggctccctaaatctgagaacttattcctg
gcctcccatgctagtggtcacctctacctctataatgtggagcacccatgtggcacaaca
gcgccgcagtattctctgcttcggcagggtgaaggatttgctgtttacgcttgcaaaacc
aaaacgcctcgtaatccacttctgagatgggcggtgggggaaggcgggctgaacgaattt
gcattttcgcctgacggtgtgcacatagcttgtgtcggccaagatggctgcctacgtgtc
tttcattttgattcaatggagctgcatggcgtcatgaagagctactttggtggcttgctc
tgcgtttcatggagtccggatgggaaatatttggctacaggtggagaagacgacttggtc
actgtatggtcgtttgcagagagtcgtgtggtggcgcgaggtcacggccacaagtcctgg
gtcaacgtggtggctttcgacccctttaccaccagcttagaagaagaggaaccgatggag
cttagcggtagtgaggaggacctccaccagggccagggggcactaaattttggtcgtgtc
cgaaccagcagcactttgtcccgtctctctcgacacagctctaaaggcggcgggccgtct
gtctcctaccgcttcggatcggtcggacaagatacccagttttgcctctgggatctcaca
gatgacgtcctgtatcctcgacttcccctttcccgtgccctcaccaacacatttggctcc
aacgcgccaccttccattagtgcaggattgaacagcacgagcgggagtggaggggttgaa
ggtcaccatcacccttccaacacccatcagacagcgtcattgccccttcctctacctcgc
tcgctctcaaggtccaattcccttccacatcctgctgttgcaaatgcttcaaaaggccaa
ggggggacggaaagtggagggacaggaggaagtggaggaggaagcagtgctccctttagc
attggacgttttgcaacactgtcgctccaagagcgcaaatcagacaagtctgccactgga
ggggataaggagcacaagcgctaccacagtcttgggaacatcagcaagagcaacgacaag
atcaatgtagcgccacgtagcaaccgattggatgcctctaaggtgctgggaacaacgttg
tgtccacggatgaatgaagtccctttgctagaacctctcgtttgtaagaagatcgcacat
gagaggctcacagttcttgtcttcatggacgattgcatcatcactgcatgccaagaggga
ctcatctgcacctgggcacggccgggcaaaatgcattcttctcaaccattatcgacacaa
aacggaaactcacccagtggaacggtggtatag

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