Pangasianodon hypophthalmus (striped catfish): 113544745
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Entry
113544745 CDS
T05759
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113544745
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
113544745
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
ig
Ig_2
fn3
LRR_5
C2-set_3
DUF6161
LRRNT
Motif
Other DBs
NCBI-GeneID:
113544745
NCBI-ProteinID:
XP_026799485
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MMVIVFFALLLASGGFPPAQTSCPSQCSCHYHNLSDGSRARSVICNDPAITLVPASFPTD
TSSLRIEKTAIKRIPSEAFKYLPNLEFLWMSFNVLSSVNVDSFRGLNSLEELRLDGNSLT
AFPWESLKYMPNLKLLDLHSNKLSSVPTEAVKYIRPLTYLDLSSNNLLTMPTEVLTTWMT
VKPIQGAENSKIILGLHDNPWLCDCRLYDLVQFQKSPSLAVAFIDTSLRCTAPESLSGVL
FSDADLRRCQEPKVHSAVSRIRSTVGSNVLLRCGAVGVPMPTLTWRRADGKTLNGTVKQE
NSKDGIVWSILNVPVVSFHDSGKYICKATNYAGSAEALIALIISKSPKLDNGTETVKKIK
EDKQNPAEKEKIITKYISPRPSSVPVITSPMVYTGPYPGMQSDSVAESGTNTHPTSPDRL
LEANLSNLAANASSLQQDLNRIVRSVKVVGDTDYSVCLTWRAPKANNSTAFSVLYAVFGE
RDMRRINVSPGNNRIIIEGLVPKTKYIACVCVKGLIPKKEQCVIFSTDAAASANGTQKLI
NVVVISVACVIAVPLTVVVCCGALKRKIQKLLSKKSKDIQDSYVTFESLSPSTKAKGLEG
DYLSKLNPEESNRLLSARSSLDSESITQIEEQRNEYLC
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcattgtcttctttgctctgttgctcgcatcaggtggatttccgcctgcacag
acctcatgtccttctcagtgcagctgccactatcacaacctgagtgatggatccagggcc
aggagtgtgatttgtaatgaccctgcaataaccctggtgcctgccagcttccccactgat
acatccagtctcagaatagaaaaaacagctataaagaggatccccagtgaagcatttaaa
tacctcccaaatctggagtttttgtggatgtccttcaatgtattgtcatcagtgaacgtg
gacagcttccgtggactgaacagtctggaagagctaaggcttgatggaaattcccttact
gcttttccttgggagtccttaaagtatatgcctaacctaaagctccttgacttgcacagt
aacaaactctcttcagtccctacagaggcagtaaagtacataaggcctttaacatacctg
gatctctccagcaataacctgctgacgatgccgactgaagtccttactacttggatgaca
gtcaaacccatccaaggagcagagaattcaaaaattattcttggactccatgacaatcct
tggctttgtgactgtcggttgtatgacctggtccagttccaaaagtctccatcactggct
gtggccttcattgacaccagcctgaggtgtactgctcctgagagtctctcaggagttctg
ttcagtgatgctgacttgagacgatgccaggagcccaaggttcattcagctgtatcccgc
atcaggagcacagtgggcagcaatgtgttactgcggtgtggtgctgttggcgtccccatg
cctacgttgacatggagaagggcagatgggaaaacgttgaatgggacagttaaacaagag
aactctaaagatggaattgtttggtctattctaaatgtgcctgttgtctccttccatgac
tctgggaaatacatatgcaaagcaacaaactatgctgggagtgcagaggctttgattgct
ttaatcataagcaagtctccaaagttagacaatggaactgaaactgtaaagaaaatcaaa
gaagacaaacaaaaccctgctgaaaaagaaaaaattattaccaaatatatttccccaaga
ccctcttctgttcctgtaataacaagtcctatggtttacactggtccctatcctggcatg
cagagtgacagcgttgcagagagtgggacgaacacacatccaactagtcctgatcgactt
ctagaggccaatctgagcaacctcgcagccaatgcctcctctctgcagcaagaccttaac
aggattgttcgctcagtcaaagtggttggagatacagactattctgtgtgcctaacctgg
agagccccaaaagccaataactcgactgcctttagtgtgctgtatgcagtatttggagag
agggacatgcgcagaatcaatgtcagtcctggaaacaatcgaatcatcattgaaggcttg
gttccaaaaaccaaatacattgcctgtgtgtgtgtaaaaggtctgatccctaaaaaagag
cagtgtgtaatcttttccacagatgcagcagcaagtgctaatgggacccaaaagcttatt
aatgtagttgtaatatccgttgcctgtgtgatagctgtgcctctgactgtggtcgtctgt
tgtggagcacttaagaggaaaatccaaaaacttctgagcaaaaagtccaaagatattcag
gattcatatgtaacatttgagagtctttcgcccagcacaaaggccaaaggcctggagggg
gactatctgtccaaactgaacccagaggagtccaatagattgctatcagccaggtctagc
ctggactctgagtccatcactcagattgaagaacagcgaaacgagtacttgtgctga
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