Pangasianodon hypophthalmus (striped catfish): 113544785
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Entry
113544785 CDS
T05759
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
113544785 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phyp03400
]
113544785 (xrcc4)
DNA repair and recombination proteins [BR:
phyp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
113544785 (xrcc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
XLF
ABC_tran_CTD
DUF6496
Bacillus_HBL
GEMI5_RBS
Motif
Other DBs
NCBI-GeneID:
113544785
NCBI-ProteinID:
XP_026799532
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MKVTVREISIASKPECTFYLKLEWAKDLGAGFVVLLCDGVSAWSGEVSEEDVSREAQEME
MPRERYVRDLQLILTGEGQADQSYSFHLAPEQSGSPMLKLSYEKVQSEMSFRFGMVELLP
VPEPTKVIKELITYGLERSARLQAKKHNVYKENQRLRNEQEHITAEMERYIKEKETLERE
LYNRFVLILNGKKAKIRTLQERIKQLQNTIQEEMHRWKRGEACHGGNEHADEKLEKSDYG
NTTDEEGDVDSKTQNLKQSSNQVLASNPMDESLNDIADVAPSRKRRQRGIQPLESQTKRP
ALEQRQTLRFLSGCFTEESKPVRHVKQRRVVLPWVSLSVSFGFSIMPQSHHPIAPR
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcactgtacgtgaaatatctatagcgtctaaacctgagtgcacattctacctc
aagttagaatgggccaaagatctgggagctggttttgttgtactgctctgtgatggtgtc
tctgcatggagtggagaagtatcagaggaggatgtcagcagggaggcccaagagatggag
atgccaagagagaggtatgtccgtgacctgcagctgattctgactggagagggacaggca
gaccagagctacagttttcatctggcacctgagcaatccggaagccctatgttaaagcta
tcttacgaaaaagtgcagagtgaaatgtcgttcaggtttggcatggtggaactgctacct
gtgccagagcccactaaagtcataaaggagctcattacatatggcttagagcgcagtgct
cgcctgcaagccaagaaacacaacgtgtacaaggagaaccagagactgaggaatgagcag
gaacacatcactgcagaaatggagagatatatcaaagaaaaggagacactggagagagag
ctgtacaaccgctttgtgctgatccttaatgggaagaaggccaagatccgcactttacag
gagaggatcaaacagctacagaatactatacaagaagaaatgcacagatggaagagaggg
gaagcctgtcatggaggaaatgagcatgcagatgagaaacttgaaaagagtgactatgga
aacaccacagatgaggaaggggatgtagattcaaaaactcagaatctgaaacaatcaagc
aatcaagtgctggcaagcaacccaatggatgagagtctaaatgatattgcggatgtggct
ccaagccgcaaacggcgtcaacgtggtattcaacccttggaatcccagacaaaaagacca
gctctggagcagagacagaccttaaggtttctcagcgggtgcttcactgaggagagcaaa
cctgttagacatgtgaagcagagaagagtggtgctcccgtgggtgagccttagcgttagc
tttggcttttcgattatgccgcagagtcatcacccaatcgccccacggtga
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integrated database retrieval system
