Pangasianodon hypophthalmus (striped catfish): 113544812
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Entry
113544812 CDS
T05759
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113544812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113544812
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113544812
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
TASOR_alpha-beta
Motif
Other DBs
NCBI-GeneID:
113544812
NCBI-ProteinID:
XP_026799594
LinkDB
All DBs
Position
Unknown
AA seq
408 aa
AA seq
DB search
MDGDGSQATSGSPSDTQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVDDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPAAAYGPVAAAAAVAAARGSGRGARGRGSYVAYPQNPGPGFPDYGFYSAPSDQRGA
PCSFADYGSLGPQAAQMLQSEHATSACNSPLQHLHSPDQFKSPGANPARPGAFPGANSPG
PVADLYGPTSQESAVGNYISAASPQPGSGFSHGIAGPLIATAFTNGYH
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggatggagacgggagccaagccacgtccggaagcccgagcgacacacagcatgacccg
ggcaaaatgtttatcggtggcctgagctggcagacctcaccagacagccttagagactat
ttcagcaaatttggagaaatcagagaatgcatggtgatgcgagaccccacaaccaaacgc
tcaagaggcttcgggttcgttacgttcgctgacgcggccagtgtagataaagtcctagct
cagccgcaccacgaattagactcaaagacgattgacccaaaagtggccttccctcgccgg
gctcagcctaagatggtcacaagaacgaagaaaatatttgtgggtggtctgtcagcgaac
acagtggtggatgacgtgaagcagtatttcgaacagtttgggaaggtagaagacgctatg
ctaatgtttgacaagaccactaatagacacagaggctttggcttcgtaacttttgagaat
gaagatgtcgtagagaaagtctgtgaaattcatttccatgaaatcaataataaaatggta
gaatgtaagaaggcccagcccaaagaggtgatgttccccccaggcacacggggcagggcc
aggggtctgccctacaccatggacgccttcatgctgggaatgggcatgctgagttaccca
aacattgtggcgacgtatgggcgtggatacactggatttgctccgagttatagctaccag
tttcccggtttcccggcagcggcgtatggtccggtggcggcagcagcggcagtggcagca
gcacgaggctcaggtaggggcgcccgaggaagaggcagctacgtggcgtacccacagaac
ccggggccaggctttcccgattatgggttttattccgcgcccagtgaccagcggggggca
ccctgctcctttgccgactatggctccctggggcctcaggcggctcagatgctgcaaagc
gagcacgccacatccgcctgcaactctcccctgcagcatcttcacagcccggatcagttt
aagagcccaggcgctaaccctgctcggcctggagccttcccgggtgccaacagtccaggg
cctgtagctgatctgtatggcccaactagtcaggaatcggccgtggggaactacatcagt
gccgctagtcctcagcctggctccggcttcagccacggcattgctggccccttgattgcg
acggcttttacaaatggataccattga
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