Pangasianodon hypophthalmus (striped catfish): 113544836
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Entry
113544836 CDS
T05759
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 2-like
KO
K12326
Ras-specific guanine nucleotide-releasing factor 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113544836
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
IQ
PH_11
Par-4_C
Motif
Other DBs
NCBI-GeneID:
113544836
NCBI-ProteinID:
XP_026799655
LinkDB
All DBs
Position
Unknown
AA seq
1278 aa
AA seq
DB search
MQKSVRYNEGHALHLSVIACKEGTKRGYLSKKATENSRWNDKYFALYQNILFYFENEQST
RPTGIYLLEGCTCARASAPKVSTVSRDNPDKQQHYFLVIFGHDGQKPLELRAEEDTDCTE
WVEAIQQASYSDLIIEREVLMQKYIHLVQIMETEKVAANQLRTQLEDQDTEIERLKTEVL
SLNKAKERMLPCHSNQEEDDPDIKKIKKIQSFMRGWLCRRKWKIIVQDYICSPHAESMRK
RNQIVFNMLEAETEYVLQLSILVNCFLRPLRMAASSKKPPIGHDDVSSIFLNSETIMFLH
EIFHQGLKARLANWPRLVLADLFDILLPMLNIYQEYVRNHQYSLQVLANCKQNRDFDKLL
KQYEANAACEGRMLETFLTYPMFQIPRYIITLHELLAHTPHEHVERKSLEFAKSKLEELS
KMMHDEVSDTENIRKNLAIERMIVEGCDILLDTSQTFVRQGSLIQLPSVERGKLSKVRLG
TLSLRKEGERQCFLFTKHLLICTRTSSGKLHLLKQGGTLSLIECTLIEELDANDEDYTAA
GQSFSHLEFKLLVEPADGPSFSVVLLAPSRQEKAAWTSDISQCIDNIRCNGLMTSVFEEN
SKVTVPHMLKSDTRLHNDDVDICFSKTLNSCKVPQIRYASVDRLLERLTDLRFLSIDFLN
TFLHTYRIFTTAAVVMDKLNDIYKRPFTSIPVRVQYLSSDRLSISSICPDYSLKITRLSL
DQSKSLELFFATNQGPWGTELLNNKSPRLSRKFSTPPPLSIPSRTSSPMHCRKLSLTSPV
SGGKAMALDLSASSLAVSSPTSTCNPMVSSPPPNYTKAPLDLSKGLSSPELGSTTPEEGG
ELPRIDAFCSKLRRSVKRNFLESLSFDKFIPETPTSVESGDLSLCSLPSTPSSTPRHPRY
RQPGGQSMENLRCTVSPASAFAIATAAAGHSGPQGFTSPEKSYDKEFLIRRAATNRVLNV
LRHWVSKHSQDFDMNGELKAGVITLLEEVLRDPDLLPQERKATTNILSALSQEEPDDTQL
KIKDVLQTAEYPKMECFDSLSAMELAEQITLLDHIVFRSIPYEEFLGQGWMKVDKNERTP
YIMKTSQHFNDMSNLVASEIMSHTEVSSRANSIEKWLAVADICRCLNNYNGVLEITSALN
RSAIYRLKKTWAKVCKQTKALMDRLQKTVSSEGRFKNLRETLKNCNPPCVPYLGMYLTDL
AFIEEGTPNFTEEGLVNFSKMRMISHIIREIRQFQQAPYRIEHQPKVTQFLLDKTLVMDD
DTLYELSLRLEPRLAPAN
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaagtgtgcgctacaatgaggggcacgcacttcatctctctgtgatcgcgtgt
aaagagggaaccaaacgcggctacctgagcaagaaagcgaccgagaacagtcgctggaat
gacaaatacttcgctctgtaccagaacatcttgttttactttgagaatgagcagagcacc
aggccgacagggatttatttactggaagggtgcacctgcgcgcgcgcctcagcccccaaa
gtgtctacagtcagccgagacaatcctgataaacagcagcactatttcctggtcatcttc
ggccatgatgggcagaaacctctggagttgcgggccgaagaggatacagactgtactgag
tgggtggaagccattcagcaagccagctactctgacctcatcatcgagcgtgaggtgctc
atgcaaaagtacatccacctggtgcagatcatggagacagagaaggtggctgctaatcag
ctccgcacacagcttgaagaccaggacacagagatcgaaaggctcaagactgaggttttg
tccctgaacaaagcaaaggagagaatgttaccttgtcattccaatcaagaagaggatgac
cctgatataaagaaaataaaaaagatacaaagcttcatgcgtggctggctttgccggaga
aagtggaagatcattgttcaagactacatctgctcaccccatgctgaaagcatgaggaag
aggaaccagattgtcttcaacatgttggaggctgagactgaatatgtgctccaactgtcc
atcctggttaactgctttctgcggccactcaggatggctgccagttccaaaaaacctcca
attggtcatgatgatgttagcagcattttcctcaatagtgaaactataatgtttcttcat
gagatatttcaccaaggcctaaaagcaagacttgccaattggccaagattagttttagct
gacctctttgatatattgctgccgatgttaaacatctaccaagaatatgtgcggaaccac
cagtacagtcttcaggttctagctaactgcaagcagaaccgggactttgacaagctgctg
aagcagtacgaggccaatgctgcctgtgagggccgaatgctggagacatttctgacctac
ccaatgtttcagattcctcgatatatcatcactctgcatgagctgcttgcccatactccc
catgagcacgtagagcgcaagagtctggagtttgccaagtcaaaactggaggagctgtcc
aaaatgatgcatgatgaagtgagtgacactgagaacatccgtaagaatcttgccattgag
cgcatgattgtggagggctgcgacatcctcttggacaccagccagacctttgtacggcaa
ggctctctcatccagctgccttcagtggaaagaggcaaactgagcaaagtgcgcctgggc
acactgtcgctgcgcaaagagggcgagcgccagtgtttcctcttcaccaaacacctcctg
atctgcacccgcacctccagcggcaagctgcatctgctcaaacaaggaggcactctgtct
ctgatagagtgcactctcattgaagagctagatgccaatgatgaagactatactgctgca
ggtcagagctttagtcatttagagtttaagctgctggtcgagccagctgatgggccgtct
ttctcagtagtcctgctggcaccgtctcgccaggagaaagctgcctggaccagtgacatc
agccagtgcatcgataatattcgctgcaatggccttatgaccagtgtttttgaagagaac
tccaaggtcactgtgcctcacatgctcaagtcagacacacggttgcacaatgatgatgtg
gatatttgcttcagcaagacactcaactcatgcaaggtgccgcagatccgctatgccagc
gttgaccgtctgctggagcggctcactgacctccgcttcctctccattgacttcctcaac
accttcctgcacacataccgcatctttaccactgcagctgtggtaatggacaagttgaac
gacatctacaagaggcctttcacctccatccccgtcagggttcagtacctctcatctgac
cgtttgtccatctcctccatctgtccagactacagcctgaagatcacaaggctttccttg
gaccagtctaagtctctagagctcttttttgccactaaccagggcccgtggggcactgag
ctcctgaacaacaagtccccccgattgtcacgcaagttctctacacctcctcctctctca
atcccttcccggacgtcttcacctatgcattgccgtaaactgtcactcacttcacctgta
agtgggggtaaagccatggctctggatctctcagcctcgtccttggcggtcagtagtccc
acatccacctgcaaccccatggtctcttctccaccacccaactatactaaggctccactg
gacctgagcaagggcctcagttcacctgagctaggctccaccacaccagaggaaggtggg
gaactcccacgtattgatgctttctgtagcaagctgaggaggagcgttaagcgaaatttc
ttagagtctttgtcatttgacaagttcatcccagagacacctacctctgttgagtcagga
gacttatctctgtgcagcttgccctctaccccttcctctaccccacgacacccccgttac
agacagccaggaggtcagtccatggagaatttgcgctgtacagtgtctcctgcctccgcc
tttgccatcgccacagcagcagctggacatagtggccctcaaggtttcaccagcccagag
aagtcatacgacaaggagtttctcattcgccgggcagccacaaacagggtgctcaacgtc
ctgcggcactgggtttccaagcactcgcaggactttgatatgaatggtgaactgaaggcg
ggagtgatcactctgctagaggaagtgctgagggatcctgacctgctacctcaggaaaga
aaagccacaaccaatatactaagtgccctttctcaagaggaaccagatgacacgcagctt
aaaatcaaagatgttctccaaacggctgaataccccaaaatggagtgttttgattctctg
tctgccatggagctggctgagcaaatcaccttactggaccacattgtgttcagaagtatt
ccctatgaggaatttcttggccaaggatggatgaaagtggacaaaaatgaaagaactcct
tacatcatgaagactagtcagcacttcaatgatatgagtaatctggtggcatctgagatc
atgtcccacacagaggtgagctccagggccaactcaattgagaaatggttggcagtggcc
gatatctgtcgctgcctcaacaactacaacggagtgctggaaatcacatctgctctcaat
cgcagtgccatatacaggctgaaaaagacctgggcaaaagtctgcaagcagactaaagca
ctgatggacaggctgcagaaaacagtgtcttctgaaggaagatttaaaaacctaagggaa
accctgaagaactgcaatcctccatgtgtaccatatttgggcatgtacctaacagacttg
gcatttattgaggaaggtacaccaaatttcacagaagaggggctggtcaatttctccaaa
atgagaatgatttctcacatcataagagagatacgacagtttcaacaggccccctacagg
atagaacatcaacccaaggtgacacagttcctacttgacaaaacgctcgttatggatgat
gacactctatatgaactgtctctaaggcttgaaccaagactcgcacctgccaactga
DBGET
integrated database retrieval system
