Pangasianodon hypophthalmus (striped catfish): 113544859
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Entry
113544859 CDS
T05759
Symbol
dcps
Name
(RefSeq) m7GpppX diphosphatase
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113544859 (dcps)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113544859 (dcps)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
113544859 (dcps)
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
113544859 (dcps)
3'-5' decay
Other 3'-5' decay factors
113544859 (dcps)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
DcpS
HIT
CEP170_C
Motif
Other DBs
NCBI-GeneID:
113544859
NCBI-ProteinID:
XP_026799695
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MAAPQNGGDSDPQKEAKRLKTDENDAGNEGEPTAEMSISGFEVGRILRDSAREKNIFVHG
KIDDQEAIIILEKTPITQDVLPEMLKNSTQMLEMRNDIYSTYQLQPPPRLNGIKTTVICP
ATEKHVKKYLRQETFLIEETEDDYQSITLPYINSQSFSVQWVYNILEKKAEADRIVFEDP
DPQVGFVLLPDFKWDQKQLDDLYLIAIVHRRDVKSLRDLTPDHLPLLRNIREKGLEAIMK
RFSVPASKLRVMLHYQPSYYHLHVHFISLDYEAPGCSVERAHLLIDVIQNLQDDPEYYRK
HTLTFPIRADDALLTKFKEAGRV
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccccaaaatggcggagactccgacccgcagaaagaagcaaagcggctgaaa
acggatgaaaatgatgctggaaatgaaggcgagcccacagcagagatgtccatttcgggc
tttgaagtgggacggatcctccgcgactctgctagggagaaaaacattttcgtacacgga
aagattgatgaccaggaggctattatcattctggagaaaacaccgatcacacaggatgtc
cttccagagatgttgaagaacagcacacagatgctggagatgaggaacgacatctacagc
acctaccagctccaaccgccaccgcgtctcaacggaattaagaccactgtgatctgcccg
gcaacggagaaacacgtgaagaagtatctgcgtcaggagacgttcctcattgaggagact
gaggatgactatcagtccatcacgcttccctacataaacagccagagcttcagcgtgcag
tgggtctacaacatcttggaaaagaaagcggaggctgatcggattgtttttgaagatcca
gacccgcaagttggtttcgtcctgctgccagatttcaaatgggaccaaaagcagctcgat
gacttgtatctgattgcaatcgtacatcgaagggacgtaaagagtttgagagatctcacg
cctgatcatcttcctttactgagaaacatccgtgagaaaggactggaggccatcatgaag
cgcttcagcgtcccggcgtctaaactgcgagtgatgctgcactaccagccgtcctactac
cacctccacgtgcacttcatttcgctggattacgaagctccggggtgcagcgtggagaga
gcgcacctgctcatcgacgtcatccagaacctgcaggacgaccctgagtactaccgcaaa
cacacactgaccttcccgatacgggcggacgacgcactgctgaccaagttcaaagaagca
gggagagtctag
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