Pangasianodon hypophthalmus (striped catfish): 113544885
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Entry
113544885 CDS
T05759
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113544885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113544885
03012 Translation factors [BR:
phyp03012
]
113544885
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113544885
Translation factors [BR:
phyp03012
]
Eukaryotic type
Release factors
113544885
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
113544885
NCBI-ProteinID:
XP_026799742
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIMTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYVLRCHGAEGSGPENDEKTLYLTPEQEKDK
SHFTDKETGQEHELLESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILR
YRVDFQGMDYQGEDEELYDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacccgagcgctgcggacaggaacgtggaaatctggaagattaagaagttg
atcaaaagccttgaagcagccagagggaatggcaccagtatgatttccctcatcatcccc
ccgaaggaccagatctcccgtgtggctaagatgctggcggacgagttcggcacggcgtcc
aacattaagagcagagtgaaccgactgtctgtgctgggagccatcacttcagtacagcag
agactcaaactctacaacaaggtgccccccaatggcctggtggtgtactgcggaaccatc
atgacggaggagggcaaagagaagaaagtcaacatcgactttgagccgttcaagccaatc
aacacgtccctgtatttatgcgacaacaagtttcacacagaggctcttaccgcattgctc
tcggacgacagcaagttcggatttatcgtgatcgacggcagtggcgctctcttcggaact
ctgcaaggcaacacgagagaggttctgcacaaattcacagtggacctgccgaaaaagcac
ggacgaggaggtcagtccgccctgcgattcgctcgcctgaggatggagaaaagacacaac
tacgtgaggaaggtggcggagacagccgtgcagctgttcgtctccaacgacaaggtcaac
gtcgccgggatggtcctcgccggatcagccgactttaaaaccgagctcagccagtcggac
atgttcgacccgaggttacaagccaaggtgctgaaactggtggacatttcttatggagga
gagaacggattcaatcaggcgatcgaactgtcggccgaggtgctctccaacgtcaaattc
attcaggagaagaagctgataggacgctactttgacgagatcagtcaggacacggggaag
tactgtttcggagtcgaggacacgctcaaagctctggagatgggagccgtggagattcta
atcgtctacgagaacctggacaccatgcgctacgtactacgctgccacggagcagagggc
agtgggcctgaaaatgatgagaagacactatatttgacaccagagcaggagaaggataag
tctcacttcacagacaaagagacagggcaggagcacgagctcttagagagcatgccgctg
ctcgagtggttcgccaacaactacaagaaattcggggctacgctggagatcgtgacggac
aaaagtcaggagggctcgcagtttgtgaagggcttcggcgggatcgggggaattttgcga
tacagggtggatttccagggcatggactatcagggagaagacgaggagttgtacgacttg
gatgactactag
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