Pangasianodon hypophthalmus (striped catfish): 113544887
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Entry
113544887 CDS
T05759
Name
(RefSeq) contactin-associated protein-like 4 isoform X1
KO
K24337
contactin associated protein-like 3/4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113544887
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
113544887
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
EGF
PMP1_2
F5_F8_type_C_2
Motif
Other DBs
NCBI-GeneID:
113544887
NCBI-ProteinID:
XP_026799744
LinkDB
All DBs
Position
Unknown
AA seq
1293 aa
AA seq
DB search
MDLPLRAKHTALIKLALMLCCVPLSSCKDGCDSSLVSNLPQSAFRSSSQLSNSHGPGYAK
LNRRDGAGGWSPLDSNKYQWLEINLGERTEVTAIATQGRYGSSDWVTHYLLMFSDTGHNW
RQYRQEDSIGAFSGNTNADSVVSYKLQQPVFTQFLRVLPLDWNPNGRVGLRLEAYGCQYK
SDVASFDGASYLLFKLDEVTNPLPKDLLTMSFKTLHSSGVLMHIDSKHGHTLTLELLKGK
LFVHLRKGNFHTAVSLGSLLDDQHWHRVSIERLRGHVNFTVDKSTQQLQLPEHQSHFEIN
EISFGAVSADGTQRENSRRNFHGCLENVQYNGVNVIVLAKRKQLTVVGNVTFACVEAVDV
PVTFASSESFLQLPWTLTRDTMSVGLQFRTWNKAGLLMTFDLQHQAGTLWVYLSDARARM
QVHKAGRIMTDITAGSALNDGQWHSVDLSVRRGRLILAVDKSDMSTITISFPIMPANQIF
LGGCPITDDGCKKPSNVFQGCMRLIHLDEGFVDLIKVQQMLIGNFTNLQMDMCGIIDRCS
PSHCEHGGRCTQSWSTFHCDCSDTGYTGATCHSSVYEVSCEAYKHRGNTSGLYHIDVDGS
GPIKPQLIYCNMSDKAWTVIQHNNTELTKLRASSGSAQHLASFNYSADTEQLAAIITRAE
RCEQELSYHCKKSRLLNTPDGAPFTWWVGRSGDAHTYWAGAPPGTQQCACAVHDNCVDPE
HFCNCDRDLDDWLNDSGVLSHKEHLPIRLLAVGDVSRPGSEAAYRVGPLQCYGDNDFWNA
AHFDKETSYLHFPTFHGELSADISFFFKTSSSSGVFLENLGIKDFIRIELSLPTEVVFSF
DVGNGPFEVRVKTPIPLNDERWHHVVAERNVKEASLSVDHYPGSVQKAPTEGHIHLQLNS
QLFVGGTASRQKGFLGCIRSLKLNGKTLDLEERAKITPGVRPGCPGHCSSYGHLCQNQGQ
CLDKHNGFTCDCGASSYTGTFCHKEVSAFFRPSTSVTYTFKEPYELNRNGSAMSSSIYSD
LTLKGENISLSFRTSQAPVILLYASSYYREFLAIFLNRNGQLEVKYKLQNNRDADVFRSS
VKNLANGQLHRVSVRRVLESLSIQIDQNAREDFNLSSDVDFNAIKAIVIGKVPEYDELDA
EITRLASQGFTGCLSVVQFNSISPLKAALLYPHTSPVIVTGTLTESNCGSSSSSSPYAAE
TTHSLSDHVGTVGEPVVNAISGDSALIGGVIAVVIFVILACLAVMARFFYRRKETFQTQE
SKGAKSEDGPETAFNAEPSAQSVISESQKEYFI
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atggatttaccgctcagagcgaaacacacagcgctcatcaaactcgccctgatgctctgc
tgtgtccctctgtcatcctgcaaagatggctgtgacagttcactggtgtccaatctcccg
caatcagccttcaggagttcatctcagctgtccaatagccacggacccggttatgccaaa
ctcaacaggagagacggggcaggtggatggtcaccactggactccaataagtatcagtgg
ttggagattaatcttggggagaggacagaggtcacagccattgctacccagggcagatac
ggcagttcagactgggtgactcactaccttctcatgtttagcgacacaggccataactgg
agacagtaccggcaggaggatagcattggggcattctctgggaacacgaacgcagacagc
gtagtgtcctacaagctccagcagccggtgttcactcagttcctccgtgtgctgcctctg
gattggaatcccaatggaagagtcgggttacgactggaggcgtacggctgccaatacaaa
tctgacgtggccagcttcgatggagccagctacttgctcttcaagcttgatgaggtcacc
aatccattgcccaaagacctgctaactatgagcttcaaaacccttcacagctctggagtc
ctgatgcacatagacagcaagcacggacacaccctcactctggagttactcaaaggaaag
ctgttcgtgcatctcagaaaaggcaattttcacactgcggtgtcactaggcagcctgctg
gatgaccaacactggcatcgcgttagcatcgagcgactccgaggacatgtcaacttcacc
gtggacaaaagcacgcagcagctgcaactccccgaacaccagagtcacttcgagattaac
gagatcagtttcggtgccgtttcggctgacgggactcagagagaaaactccagaaggaac
ttccacggctgtctggagaacgtgcagtacaacggcgttaatgtgatcgtcctggctaaa
aggaaacaactcaccgtagtgggaaacgtcacattcgcctgcgtggaggccgtcgacgtg
ccggtgacgttcgcgagctcggagagtttccttcaattgccgtggacgttgacacgtgac
accatgtcagtcggattacagttccggacctggaacaaggcgggcctgcttatgaccttt
gacctccagcaccaagcgggaacgctgtgggtttacctgagtgacgcgagggcgaggatg
caggtccacaaggctggcaggatcatgacagacatcacagcagggtcagcgctgaacgat
ggccagtggcactctgtggatctgagtgtccgccgaggtcgtctgatcctggcagtggac
aaatcagacatgtccaccatcactatatccttccccatcatgcctgcaaaccagatcttt
ttaggaggatgtccaattacggatgatggatgcaagaagccctctaacgttttccaggga
tgcatgcgcctcatccacctggacgagggattcgttgatctgatcaaggtgcagcagatg
ctaatcggaaacttcaccaacctccagatggacatgtgcggaatcatcgacaggtgctct
ccgagtcactgcgaacatggcgggaggtgcacacagtcatggagcacttttcactgcgac
tgctcagacaccggctacacaggagcaacgtgccatagctctgtttacgaggtgtcgtgc
gaggcatacaagcacagagggaacacgtcagggctgtaccacatagacgtagatggaagc
ggacccatcaagccacagctcatctactgcaacatgtcagataaagcgtggacagtgatc
caacacaataacacagagctcaccaaattacgggcatcctcagggagcgctcagcatttg
gcctcctttaactattctgccgacaccgagcagctcgcggccataattacccgagccgag
cgctgcgagcaggaactctcctaccactgcaaaaagtcacgcctcttaaacacaccagat
ggtgcgcctttcacctggtgggtgggccggtcaggagacgcccacacgtactgggcaggg
gcaccaccgggcactcagcagtgcgcctgtgctgtccacgacaactgtgtggatccggag
cacttctgtaactgcgaccgcgacctcgacgactggttgaacgattctggtgtcctctct
cacaaagagcatttgcctatcaggctgttagcggtgggggatgttagcaggccggggtca
gaggcggcgtatcgggtgggtcccctccagtgctacggtgacaatgacttctggaacgcg
gcccacttcgataaggagacttcttacctccacttccccacgttccacggggagctcagt
gctgatatttccttctttttcaagacctcctcctccagcggcgtgttcctcgaaaacctg
ggaattaaagacttcatccgaatcgagctgagcttgccgactgaagttgttttctccttt
gatgtgggaaacgggccgttcgaggtgcgtgtaaagactccgatccctctgaacgacgag
cgctggcatcacgtggtggctgagcggaacgtgaaagaggcgtctctgagtgtggaccat
taccccggatcagtgcagaaagcccccactgaggggcacatccaccttcagctcaacagc
cagctttttgtgggaggaaccgcgtccaggcagaagggcttcctgggctgcatccggtca
ctgaagttgaacgggaagacgctggatctggaggagcgagcgaagatcacacctggcgtc
cgccctggatgcccgggccactgcagcagctacgggcacctgtgtcagaaccagggccag
tgcctagacaagcataacggcttcacctgcgactgtggagcctcgtcatacaccggcacc
ttctgtcacaaagaggtttctgcgtttttccgacccagcacttcggtgacgtacacattc
aaggagccgtacgagttgaacagaaacggcagtgcaatgtcctcctccatctactcggac
ctgacgctgaaaggagagaacatatcactgagttttcgcaccagccaggcgccagtcatt
ctcctttacgccagctcgtactacagagaattcctcgctatcttcctcaacaggaacggt
caactggaggtgaagtacaagctgcagaataacagagacgctgacgtcttcagatcaagt
gtgaagaacctggccaatggacagctgcaccgagtgtctgtcaggagagtcctggaaagc
ctcagtattcagattgatcagaacgcgagggaagacttcaacctctcatcagatgttgac
ttcaatgccatcaaagccatcgtcatcgggaaagtgcctgaatatgacgagctggatgca
gagataactcgtctggcttctcagggctttacaggctgtctgtcagtggtccagtttaac
tccatctctcctctgaaagcagcactgctctatccacacaccagtcctgttattgtcaca
gggacactgaccgagtccaactgcggctcgtcttcatcatccagtccctacgcagccgag
acaacccactcactgtcagatcatgtgggcactgtaggagagcccgtagtcaatgcaatc
agcggcgactcggctttgattggaggcgtcatcgccgtcgtgatatttgtgatcctagcc
tgcctggctgtcatggcgcgattcttctacagacggaaagagacgtttcagacccaggag
tcgaagggagcgaaatcagaggacggtcctgaaacggcgtttaacgctgagcccagcgcg
cagagcgtaatcagtgaaagccaaaaagagtacttcatatga
DBGET
integrated database retrieval system
