Pangasianodon hypophthalmus (striped catfish): 113544930
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Entry
113544930 CDS
T05759
Symbol
zfand4
Name
(RefSeq) LOW QUALITY PROTEIN: AN1-type zinc finger protein 4
KO
K12163
AN1-type zinc finger protein 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113544930 (zfand4)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113544930 (zfand4)
Ubiquitin system [BR:
phyp04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
113544930 (zfand4)
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Zinc finger domain-containing proteins
AN1-type zinc finger domain-containing proteins
113544930 (zfand4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
zf-AN1
Rad60-SLD
Ubiquitin_2
HIF-1a_CTAD
Motif
Other DBs
NCBI-GeneID:
113544930
NCBI-ProteinID:
XP_026799810
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
MADKREPPFFNDDNLGVVNYKLPFYETMELFIETLTGTCFQLRVSPFETIVSVKAKIQRL
EGIPVAQQHLIWNSLELDDEYCLNDYSIAEGCTLKLVLAMRGGPINTKRGVXLADXYXXL
RIISFVHTLTVEMMNKPFFFFFFFXXXKQVTLLVYKEGDQLNVFRVVDRGDGTLTPVSKS
LSSGSVHNVYTEEEEEGVSISSAQLTLENTITMNKMKLLKAKMENMNLNKKPKKSTKLRV
RPPVGPRPFCGSLGSARHHRMLRILPQIGHAPATQLPLIGDQQQSSSEAGPPFTCHPSPA
SGRVTSSLTTSSKYILQEEEPWNKPTPRNIRLPPKVSRLDVSEPKAITDCLYPPLSVLSG
LEAEDETEIQSDGLMLPEDGVMMEASKPIPFNSLLPEPLSLDVSAQQETSLDSLGAVNEP
MTATPLLSQVVGSESISTWSVGTKTLQSQSDRAALNSLHTPPHVPRPFTDTFTREVSRPF
LGSNRGPTIPPCPAPQIPPFHAIRVDSPVKQPDRVCKSEAQDLTNMANNISRELSGCVSN
IDEKLARPCDLTRLCGTNAPLQANIHLLQEDLLQRIVPLQRAAYTPSGILDSTSGPSSSI
KRLGSLTYHLPPVKAPLSSKKKTSKHCFLCGKKTGLATSYECRCGNNFCSTHRYAETHNC
TYDYKSAGRRFLQKSNPIISAPKLPKI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagagggagccgccatttttcaacgatgataacctaggggttgtcaactac
aaactgcccttctatgagaccatggagctgttcatagagactctgacagggacctgcttc
cagctgcgggtctccccgtttgagacgattgtctccgtaaaagccaagattcagagactg
gaaggtatccctgttgctcagcagcatttgatctggaatagcttggaacttgatgatgag
tactgtttgaatgactatagcattgcagaaggttgcactctcaagctggtccttgccatg
aggggtgggcctatcaacaccaaacgaggtgtctgactagctgactaatactgataactg
agaatcataagctttgtgcacacgttgactgttgaaatgatgaacaaacccttttttttt
ttttttttttttnnnnnnnntaaacaggtcactttactggtgtacaaagagggtgaccag
ctcaacgtcttccgagttgtggaccgtggagacggaactctgacacctgtgtcgaagtca
ctaagcagtggttcagtgcacaatgtgtacactgaggaagaggaggagggtgttagcatt
tcctctgcacagctgacgctagagaacactatcactatgaacaagatgaagctactcaaa
gccaagatggagaatatgaacctcaataaaaagcccaagaagtctaccaagttgagagtg
aggcctccggttggtccacgtcctttctgtggctcacttggctctgctcgccaccaccga
atgctccgcatccttcctcagattggccatgcccctgcaacacagctacctctgattggt
gatcaacaacagtcttcctccgaagctggcccacctttcacctgtcacccaagtcctgcc
tctggtagagtcacttcctcactgacaacttctagcaaatacatacttcaggaggaggag
ccatggaataagcccacacccaggaatattaggctacctcctaaagtgtccaggctggat
gtgagtgagccaaaggctataacagactgtctgtacccaccgctgtctgtcctgtctggt
ctggaagctgaagacgagacagagatacagagtgatggactaatgctcccggaagatgga
gttatgatggaggcttccaaacccattccgtttaatagcctgcttccagagccactgagt
ctggatgtttctgctcagcaggagactagtctggactctttaggagctgtgaacgaaccc
atgactgcaactcctctgctttcccaagttgtgggctcagagtccattagcacatggtca
gtaggcactaagacactacagtcccaatctgacagagctgcactgaactcgctacacact
cctccgcatgtgcctcgacctttcacagacacttttaccagggaagtgtctcgccccttc
ctcggctctaacagagggcctaccattccaccatgcccggctccacagatccctcctttc
catgccatcagagtggactcaccagtaaaacagccagacagggtatgcaagagcgaggca
caggacctcaccaatatggccaacaacatttccagagagctgtcaggctgtgtgagtaac
atcgatgaaaagctagcaaggccttgtgatctgaccagattgtgtggcacaaatgccccc
ttgcaagccaacatccatctgctacaggaggatctgctacagagaatagttcccctgcag
cgagcagcatacacgccatcaggcatcctggactcaaccagtggaccctccagttcaata
aagagactaggctctctgacatatcacctccctcctgtgaaggcccccctgagctcaaag
aagaagacttcaaaacactgcttcctatgtgggaagaagaccgggttagccaccagctat
gaatgcaggtgtggcaacaacttctgctccacgcaccgctatgcagagacccacaactgc
acttacgactacaaaagtgcaggacgccgcttcctacagaagtctaatcccatcatcagt
gcaccaaagctgcccaaaatatga
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