Pangasianodon hypophthalmus (striped catfish): 113544987
Help
Entry
113544987 CDS
T05759
Symbol
lrfn2
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2 isoform X1
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113544987 (lrfn2)
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113544987 (lrfn2)
Cell adhesion molecules [BR:
phyp04515
]
Immunoglobulin superfamily
SALM family
113544987 (lrfn2)
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
113544987 (lrfn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
ig
LRR_4
LRR_5
fn3
Ig_2
LRR_9
Sp38
V-set
LRRCT
Baculo_11_kDa
GP79
Motif
Other DBs
NCBI-GeneID:
113544987
NCBI-ProteinID:
XP_026799881
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MAKVFCSLLLLGSTVMTATACPKYCVCQNLSESLGTLCPSKGLLFVPPDIDRRTVELRLG
GNYIIRITQQDFVNMTSLVDLTLSRNTISSIQPFSFVDLETLRSLHLDTNRLTELGPDAL
RGLVNLQHLILNNNQLGHISKESFDDLLLTLEDLDLSYNNLQSVPWEAIRKMLSLHQLSL
DHNLISHISEGTFTDLDKLARLDLTSNRLQKLPPDPIFARSQTNVVLSTPYAPVLSLSFS
GNPLHCNCEILWLRRLEREDDMETCASPPNLKGRYFWYVREEEFVCEPPLITQHTHKLLV
LEGQTASLRCKAVGDPMPYIHWVGPDDRLISNSSRATIYENGTLDIMVTTPKDYGTFTCI
ASNAAGESTASIELSIIQLPHLSNGTNRTSQPKSRLSDITSSTKTSKGETKPQPEQVVSV
SEVTSVSALVKWTVSKTAPKVKMYQLQYNCSDDEVLIYRMIPFASRAFVVNNLMPGMQYD
LCVLAIWDDTATTLTATNIVGCVQFVTRDDYPRCQSLHRQFLGGTMILVIGGVIVATLLV
FIVILMVRYKVSSSSQVAKLVSVSNTYSQTNGGMQAAQLVNGAPPPPAPKAVVVMHDEVV
EFKCGSLQSSLSSTSSTDSIGSEKVGRYDPCAESSTGPHRWKHAPAKTRANLDHLLGAFA
SLDIKAPARDPGNRSSTGAIMAAMDVLSDKEPLLGRGDSRLGRLLKLPLESKPKRSHSFD
MGDVGASQCLSYPQRISNIWTKRSLSVNGMLLQCDESEGEGDKGTLDSSEWVMESTV
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtgttctgcagcctcctgcttctgggaagtacggtgatgacagccactgca
tgccccaagtactgtgtctgccagaacctgtctgagtctctaggaaccctgtgtccttct
aaaggcctgctctttgtcccacccgacattgaccgtcggactgtcgagctgcggctgggg
gggaactacattatcaggattacacagcaggattttgtcaacatgacaagtcttgtggac
ttgacactttcccggaacaccataagctctatccagcctttctcttttgtggatcttgag
actctacgctcactccatctggacaccaaccgcctaactgagcttggcccggatgctctg
agaggtctggtcaacttgcagcacctcattctgaataacaaccagctgggccacatctcc
aaagagtcctttgatgacctgctgctaacactggaggatttggacctgtcctacaacaac
ctgcagagtgtaccctgggaggccatccgcaagatgctcagcttgcaccagctcagcctt
gaccacaacctcatcagccacatttctgagggaactttcacagacttggacaagttggcc
aggcttgacctcacatcaaaccggctccagaagcttccaccagatcccatatttgcacga
tctcagaccaatgtggtgctgagtacaccgtacgctcctgtgctgtctcttagtttcagt
ggaaacccacttcattgtaattgtgagattttgtggttgcgacggctcgagcgtgaggat
gacatggagacttgtgcatctcctcctaatctaaaggggcggtacttttggtatgtgcgt
gaggaggagtttgtttgtgagccacctttgattactcagcatacacataaacttctggtg
cttgaaggccagacggccagcctacgctgcaaggcagtgggtgaccccatgccttacata
cactgggtgggtcctgatgaccgacttatcagtaattcatcacgagccactatttacgag
aatggaaccctggacatcatggtcacaacccccaaggattatggcactttcacttgcatc
gcctccaatgctgcaggagaatccacagcctcaattgaactctctatcattcagctgcct
catctcagcaatggcacgaaccgtacctcacagcctaagtccaggctgtctgacatcacc
agctccacaaaaaccagcaaaggggagaccaaaccccagccagaacaggtggtatctgtg
tcagaggtcacatctgtctctgccttggtcaagtggacagtgagcaaaacagctcccaag
gtgaaaatgtaccagctccagtacaactgctcagatgatgaggtcctgatttacaggatg
ataccgtttgccagcagagcctttgtggtcaacaacctgatgccagggatgcagtatgac
ctgtgtgtgctagccatctgggacgacacagccaccaccctcaccgccaccaacatagtg
ggctgcgttcagtttgtgactcgtgacgactaccctcgctgccagtctcttcacaggcag
ttcctggggggaactatgatcttggtgatcggcggcgtgatcgttgcgactctcctggtc
ttcattgtcatcctcatggtgcgctacaaagtgagtagctcttcccaagtcgccaagctt
gtatcagtgagcaacacttactctcaaaccaatggtggaatgcaggcagcacagttggtc
aatggggctcctccacctccggcccccaaagccgtagttgtgatgcatgatgaggttgta
gagtttaagtgtggctctttgcaaagcagcctctcttccacttcctcaacagactcgatt
ggcagcgagaaggtggggcgttacgacccgtgcgcggagtccagcaccggacctcacaga
tggaagcacgctccagctaaaacaagggcaaatctagaccacctgcttggagcttttgcc
tctctggacataaaagctccagccagggatccaggtaatcgttcctccacaggggccatc
atggcagccatggacgttctttcagacaaggagccactgctgggccgtggggactccagg
ctgggccgcttgctcaagctgccgctggagagcaagcccaagcgcagtcactcctttgac
atgggtgatgttggtgcttcgcagtgccttagctacccacagcgtatcagcaacatctgg
actaaaaggagcctgtcagtgaatggcatgctgctgcagtgcgacgagagtgagggggaa
ggagataaagggacactcgacagctctgaatgggtcatggaaagtacagtctga
DBGET
integrated database retrieval system
