Pangasianodon hypophthalmus (striped catfish): 113545047
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Entry
113545047 CDS
T05759
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03008
Ribosome biogenesis in eukaryotes
phyp03013
Nucleocytoplasmic transport
phyp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113545047
03008 Ribosome biogenesis in eukaryotes
113545047
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113545047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phyp03019
]
113545047
03009 Ribosome biogenesis [BR:
phyp03009
]
113545047
03016 Transfer RNA biogenesis [BR:
phyp03016
]
113545047
03036 Chromosome and associated proteins [BR:
phyp03036
]
113545047
Messenger RNA biogenesis [BR:
phyp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
113545047
Ribosome biogenesis [BR:
phyp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
113545047
Pre-60S particles
113545047
Transfer RNA biogenesis [BR:
phyp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
113545047
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
113545047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
BspA_v
Motif
Other DBs
NCBI-GeneID:
113545047
NCBI-ProteinID:
XP_026799959
LinkDB
All DBs
Position
Unknown
AA seq
1075 aa
AA seq
DB search
MPAVMTMLADHAARQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAASV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGKSLCEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENF
VPPLLDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITAEIPQIFDAVFECTLNMINK
DFEEYPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQI
LYTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEG
KISMTLNPANPISNQAFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLR
DFLVQIKEFAGEDTTDLFLEEREASLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagttatgacaatgttagctgaccacgcagccagacagctgctggacttcaac
cagaaactggacattaatctcctggataacgtggttaactgcttgtaccatggagtggga
ccgcagcaaagaatggcccaggaggtcctcacacatttaaaggagcacccggacgcgtgg
acccgagtggacaccatcctggaattctcccagaacatgaacaccaaatactatgctctg
cagatcctggaaacagttattaaaacgagatggaagattctgcccagaaaccagtgtgaa
ggaattaaaaaatatgttgtgggcctcattatcaagacgtcttctgatgcagccagtgtg
gagaaggagaaggtgtacattggaaaacttaacatgattttagttcagatcctgaagcag
gagtggcccaagcactggcccacatttatcagtgacattgtgggggcgagccgcaccagc
gagagcctctgccagaacaacatgatcatcctgaagctgctcagcgaggaggtgttcgat
ttctccagtggacagatgacccaggtcaaagccaagcatctgaaggacagtatgtgtaat
gagttctcgcagatctttcagctctgccagtttgtgatggaaaactcccagaatgctcct
ttggtacacgccacgttagaaactctgctccggtttctgaattggatcccactgggctac
atctttgagaccaaactcatcagcactctagtgtacaagttcctgaatgttccaatgttt
cgaaatgtgacgttaaagtgtctgactgagatcgcaggtgtgagtgtgagccaatatgag
gaacagtttgtcacgctgttcactctcaccatgatgcaactcaaacagatgctgcctctg
aacacgaacatccgtctggcttacgcgaacgggaaggacgatgagcagaacttcatccag
aacctgagcctgttcctctgcaccttcctcaaagagcacggccagctcatagagaaaagg
ctcaacctgcgtgagacgcttatggaggctctgcattacatgctgctggtgtctgaggtg
gaagagactgagatctttaagatctgtctggagtactggaaccacctggcggcagagttg
tacagagagagtccattcagcacctccacctccccgctgctgtctggcagccagcacttt
gatgttccaccacgcaggcagctctatctacctgtactctccaaggtgcgtctgctcatg
gtgagccggatggcaaaaccagaggaggtgctggtggtggaaaatgaccagggagaggtg
gtgcgagagttcatgaaggacactgactctatcaacctgtacaagaacatgagagagaca
cttgtgtatctgacccatctggactacgccgatacagagcggatcatgacagaaaaactt
cataaccaggtgaatgggacagagtggtcctggaaaaacctgaacacactgtgctgggcc
atcggctccatcagcggagccatgcatgaggaggatgagaagagattccttgtcactgtc
atcaaggacttgctgggattgtgtgagcagaagcgaggaaaggataacaaggccatcatt
gcctcaaacattatgtacatcgttggccagtacccacgattcctgcgcgcacattggaag
ttcctcaagactgtagtcaacaaactgtttgagttcatgcatgagacccatgatggggtg
caagacatggcgtgtgacacattcattaaaattgcacagaagtgcaggaggcattttgtg
caggtgcaggtcggagaggtcatgcccttcatcgatgagatcctcaacaatatcaacacc
atcatctgtgacctgcagcctcagcaggtacatacgttttatgaagcagtgggttacatg
attggcgctcagacggaccaggctgtacaggagcacctgatagagaagtacatgctgcta
cccaaccaggtgtgggacagcatcatccagcaggccaccaagaatgtggatatcctgaag
gacccagagactgtgaaacagctaggaagcatcctgaagaccaacgtaagggcatgcaag
gctgtgggtcacccgttcgtcattcagctgggacgcatctacctggatatgctcaacgtc
tacaagtgcctcagtgagaacatctctgcagctatccagaccaacggtaagagtctgtgt
gagatggtgactaaacagcctctaatcagaagcatgcgcacggtgaaaagagaaactctt
aaactcatctcaggctgggtcagccgttccaacgacccacagatggtcggagagaatttt
gttccacctttgctcgacgccgtcctgatagattaccagcggaacgttccggcggccaga
gagccggaagtgctcagcaccatggcgaccatcgtaaacaaactgggcggccacatcaca
gccgagattccacagatctttgatgctgtgtttgaatgcacgctgaacatgatcaacaaa
gattttgaggagtatccagagcaccgcacacacttcttctacctgctgcaggcggtgaat
tcccactgcttcccggcgttcctcgccattcccccggcacagttcaaactggtgctggac
tccatcatctgggcctttaaacacaccatgagaaacgtggctgacactggtttgcagatt
ctctacacgttgctgcagaatgtggcccaggaggaggcggcagctcagagcttctaccag
acatacttctgtgacatactgcaacacatcttctccgtagttacggacacatcacacacg
gccggtctgacgatgcacgcgtctatcctggcttacatgtttaatttggtcgaggagggt
aagatcagtatgaccctgaaccctgcgaaccccataagcaatcaggctttcatccaggag
tacgtggcgaacttgctgaagacggccttccctcatctgcaggatgcccaggtgaaggtg
tttgtgacggggctgttcagtctgaaccaggacatccctgcgtttaaagagcacttgaga
gacttcctggtgcagatcaaggagtttgcaggtgaggacactacagatttgttccttgag
gaacgtgaggcatctctgcgccaggcccaggaggagaagcacaagctgcagatgtctgtc
cctggaatcctcaaccctcacgagatccctgaggagatgtgtgactga
DBGET
integrated database retrieval system
