Pangasianodon hypophthalmus (striped catfish): 113545073
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Entry
113545073 CDS
T05759
Symbol
atl1
Name
(RefSeq) atlastin-1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113545073 (atl1)
Membrane trafficking [BR:
phyp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
113545073 (atl1)
Autophagy
ER-phagy
ER-phagy recepters
113545073 (atl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GBP
GBP_C
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
113545073
NCBI-ProteinID:
XP_026800018
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MIVDEERAVKASGLESDTPCTMVRDKKDRDSWGSFVDKHVFEWSSEDEEPDGKARPVQVL
VVKDDHTFELDEAALSRILLAKDLRDREIVAISVAGAFRKGKSFLMDFMLRYMYSQASED
WVGDPDEPLTGFSWRGGSERETTGIQIWSEVFLVDKPDGNKVAVLLMDTQGTFDSQSTLR
DSATVFALSTMISSMQVYNISQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSMIFLVRD
WSFPYEFPYGQEGGMKFLEKRLKISENQHEELQNVRKHIHSCFTNISCFLMPHPGLKVAT
NPHFDGRLKEIDSEFIGNLKVLVPWLLSPKNLDVKEINGSKITCRGLLEYFKAYIKIYQG
EELPHPKSMLQATAEANNLAAVAAAKDLYNRKMEEVSGGDRPFLAPSELQARHAVIRDEA
LAVFRGVKKMGGEEFSRRYLLQLEAEIDELFVQYIKHNDSKNIFHAARTPATLFVVIFIM
YVAAGITGFVGVDVIASVCNMVLGFALITLCTWAYIRYSGEYRELGALIDQVAGALWDQG
STNEALYKLYNVAANHRQLYNHAFPRHQTEQHPEQDKKRN
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgattgttgatgaagagcgcgcagtgaaagccagcgggctggaaagcgacactccatgc
accatggtccgggataaaaaggatagagacagctgggggtcttttgtggacaagcatgta
tttgagtggagctctgaggatgaggagccagacggtaaggctcggccagtgcaggttctg
gtggtgaaggatgatcacacgttcgagctggacgaggcagcgctgagtcggatcctgctg
gccaaagacctcagagacagagagatagtcgcaatatctgttgctggagctttccggaag
gggaagtccttcctcatggacttcatgctacgctacatgtacagccaggcgagtgaagac
tgggtaggggatcctgatgagcctttgacaggtttctcatggagaggaggctctgagaga
gagaccaccggcatccaaatctggagtgaggtcttcctggtggacaaaccagatggaaac
aaggtggcagtgctgctgatggatacacagggaacgtttgacagccagtccacgctgaga
gactcagctactgtattcgccctcagtaccatgatcagctccatgcaggtgtataacata
tcacagaatgttcaggaggatgacttgcagcacctgcagctctttacagaatatggtaga
cttgccatggaggaaacgtttctcaaaccgttccagtcaatgattttcctggtgagagat
tggagttttccatatgagtttccctatggacaagagggagggatgaagttcctggagaaa
agactaaagatttcagagaaccagcatgaggagctgcagaacgtgaggaagcacattcac
tcctgctttaccaacatctcctgcttcctcatgcctcatcctggcctcaaggtcgccacc
aacccccactttgatggcagactcaaggagattgattcagagttcatcggtaacctgaag
gtgctggtgccatggttactcagccccaaaaacctggatgtcaaagaaatcaatggcagc
aagattacctgcagaggcctgctggagtattttaaggcatatataaagatttaccaggga
gaagagttgccacaccccaagtccatgctacaggccactgcagaggcgaataacctggca
gctgtagctgcagctaaagacctgtacaaccgaaagatggaagaggtgagtgggggtgac
cggccatttctagccccgagtgagctgcaggctcgtcatgcagtgatccgtgatgaagcc
ctagctgtgttccgtggtgtgaagaagatgggtggcgaggagttcagtcgccgctacctg
ctgcagctggaggcagagatcgacgagctctttgtgcagtacatcaagcacaatgactcc
aagaacatcttccatgcagcacggacacccgccacgctctttgtggtcatcttcattatg
tatgtggcggcgggcatcacaggcttcgtgggcgtggatgtgatcgccagcgtgtgcaac
atggttctgggtttcgctctcatcacgctctgcacctgggcctacatccgctactccggc
gagtacagagagctcggcgccctcatagaccaggtggctggagcgctgtgggaccaggga
agcactaatgaggctctgtataagttgtataatgtggctgccaatcataggcagctgtac
aaccacgccttccccagacaccagactgagcagcaccccgaacaggacaagaagagaaac
tga
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