Pangasianodon hypophthalmus (striped catfish): 113545078
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Entry
113545078 CDS
T05759
Name
(RefSeq) homeobox protein OTX1 B isoform X1
KO
K09326
homeobox protein OTX1
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113545078
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
113545078
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
113545078
NCBI-ProteinID:
XP_026800024
LinkDB
All DBs
Position
Unknown
AA seq
332 aa
AA seq
DB search
MMSYLKQPPYAMNGLGLSGAAMDLLHPSVGYPAATPRKQRRERTTFTRSQLDVLEALFAK
TRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGSSSTKARPVKKKSSPTRES
TGSESSGQFTPPAVSSAGSASSSTSSSSSSSTNNSMSTSIGTVSSIWSPAMSPGSAPPSS
SLSEPVPPSSASCMQRSISGSASSASSSSYPMSYNQTAAYGQSYPTPSGSYFSGVDCSSY
LAPMHSHHHPHQLSPMTPSSMPTHPHHHISQSSGHHHHHHHHHQAYSSAGLTFNSSDCLD
YKEQAASSWKLNFNTADCLDYKDQASWRFQVL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaaacagcccccttacgccatgaacggcctggggctgagcggagcc
gccatggacctactgcatccctccgtcggctatccagcagcaacgccccggaagcagcgg
agagagagaaccaccttcacgcgctcacagctcgacgtccttgaagctcttttcgccaaa
acgcgttacccggatatattcatgcgcgaggaagtggccctaaaaatcaatctccccgag
tccagagtgcaggtgtggtttaagaaccgtcgggcaaagtgtcgtcagcagcagcagagt
ggcagcagcagcacaaaagctcggccagtgaagaaaaaatcttctcccactagagaaagc
acgggctccgagagcagcggccagttcacaccaccggctgtctccagcgccggctctgct
tcctcttccacctcctcttcttcctcatcctcgaccaacaacagcatgtctacctcgatt
ggcacggtctcgtccatctggagcccagccatgtctccaggttcagcacctccttcctcg
tctctctcagagcctgttccgccctccagcgcctcctgcatgcagcgctccatctctggt
tcagcctcttccgcctcctcttcctcttaccccatgtcctacaaccaaacggcggcgtat
ggccaaagctaccccacaccatccggatcctactttagtggcgtggactgcagctcctac
ctggcacccatgcactcgcaccaccacccgcaccagctaagccccatgacgccgtcctcc
atgcccacacacccccaccaccacatcagccaatcttcaggtcaccaccatcaccaccac
caccatcaccaggcatacagcagcgccggcctgaccttcaactcctccgactgcctggat
tacaaggagcaagcggcatcctcctggaagctcaacttcaacactgcggactgtttggac
tacaaagaccaggcgtcctggaggttccaagtcttgtga
DBGET
integrated database retrieval system
