Pangasianodon hypophthalmus (striped catfish): 113545165
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Entry
113545165 CDS
T05759
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04137
Mitophagy - animal
phyp04140
Autophagy - animal
phyp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113545165
04137 Mitophagy - animal
113545165
04148 Efferocytosis
113545165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113545165
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113545165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
113545165
NCBI-ProteinID:
XP_026800149
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MDTGVVPEKKRVSSERRKEKSRDAARCRRGKESEVFYELAHQLPLPHNVTSHLDKASIMR
LAISYLRMRKLLKSDEAKEESELESQLNSFYLKALEGFLMVLSEDGDMVYLSENVCKCMG
LTQFDLTGHSIFDFAHPCDHEEVREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGRTV
NIKSATWKVLHCTGHVRVQEHSDNSGDGGFKEPSITYLVLICEPIPHPSNIEVPLDSKTF
LSRHTLDMKFSYCDERITELMGHEPDDLLNRSVYEYYHALDSDHLNKTHHNLFAKGQATT
GQYRMLAKKAGYVWVETQATVIYNPKNSQPQCIVCVNYVLSGIVEEDMVLSLQQNVPEET
VEKEEELQVEHEDSSVMDMMKLFKKDQLTCSVESPTSLYDKLKDEPEALTVLAPAAGDTI
ISLDFDSPDSEMQLLKEVPLYNDVMLPSTSEKLPLPLSPLAPSDPSPALAKMEPGGGDFS
FSSTSHRTPDTASTPSSSASSSEPSSPADYFHVDSDIGSEFKLDLVEKMFATDTEANTQF
NTHEMGDLDLEMLAPYIPMDDDFQLHIPSSLDPLPSSPQTGSDINSLFQQSPTRPSSTSS
SNGSIKPEPSSRVPSPLHLLQEVSSIFAAPVSEPSQALDNTPKTGISLAKRMQVEDQELS
TKLLSVQNAQRKRKLEITSLSQAVGLDALFQSMDEAVEPGKRAKVLEVKGSGLLGGNKTI
LILPSDMASRLLCSSFESSGGLPQLTRYDCEVNAPIQDRHSLLQGEELLRALDQVN
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggatactggagttgtccccgaaaagaaaagggtgagctcggagcgcaggaaggagaag
tccagggatgcggcccgatgtcgcaggggcaaggagtctgaggtcttctacgagctcgca
caccaactgcccctgccccacaatgtcacctcccacctggacaaggcttccatcatgaga
ctcgccatcagctacctgcgcatgagaaaactgctgaaatctgatgaagcaaaggaagag
tctgagctggagagccagctcaacagtttctacctgaaagccttggagggcttcctaatg
gtgctgtctgaggatggagacatggtctatctctctgaaaatgtctgcaaatgcatgggc
ctcacacagtttgatttgactggccacagcatttttgactttgcacatccctgtgatcac
gaggaagtaagggaaatgctggtgcacagaactgggtccaagaaaaccaaggagcaaaac
acagagcgaagcttcttcctgcggatgaagtgcacactcactagtagaggacgcactgtc
aacatcaagtccgccacttggaaagttcttcactgcacaggacatgtgcgtgttcaggag
cacagtgacaattctggggacggtggatttaaagagccctccattacttatctggttttg
atctgtgagcctatccctcacccctccaacattgaggtgcctctggatagcaaaaccttc
ctaagccgccatactctggacatgaagttctcatactgtgatgagagaatcacagagctg
atgggacatgaaccagatgacctgttaaataggtctgtgtatgaatactaccatgccctg
gactctgatcacctcaacaagacacatcataatttgtttgcaaagggccaggcaaccaca
ggccaatatcgaatgctggccaagaaagcaggctatgtatgggttgaaactcaagccaca
gtcatttacaaccccaagaactcccagccacagtgcattgtgtgtgtcaactatgttctc
agtggtattgtggaggaggacatggttctttctctgcaacagaatgtgcctgaggagact
gtggagaaggaggaggagctgcaagtagagcacgaggacagttcagttatggacatgatg
aagctcttcaagaaggaccagctgacctgctctgtggagagccccacgagcctgtacgac
aagctaaaggatgagccagaagccctcactgttctggctccagctgcaggggacaccatt
atttcccttgatttcgacagcccagactctgagatgcagctgctgaaggaggtgcccctc
tacaatgatgtcatgctgccttccaccagtgagaaactccctttgcccctgtcaccactg
gctcccagcgatccatctccagctttggctaaaatggagcctggaggaggggacttttca
ttctcttccacatcacaccgcaccccagacactgccagtactccttccagctccgccagt
tcctcagagcccagcagtccagcagattacttccatgtggattcagatattggctccgaa
tttaaactggatttggttgagaaaatgtttgctactgacacagaggccaacacccaattt
aacacacatgaaatgggtgatcttgacctcgaaatgctcgccccatatattccaatggat
gatgacttccagctgcatatcccctcctctctggacccactcccttctagtcctcagact
ggttctgacattaactccctcttccagcagtcacctactcgtccatcttcaacatccagt
tccaacggctctataaaaccagagccatcatcccgtgtcccctcccccctccaccttctg
caggaggtgagcagcatctttgccgcacccgtcagtgagccctcccaagcccttgacaac
accccaaagacgggcatctcgttggccaagagaatgcaagtggaagaccaggagctttct
acaaagctgttaagtgttcagaatgcccagcggaagaggaaactggagattacctccctg
tctcaggctgtcgggctggatgctttgttccaatctatggatgaagctgttgagcctgga
aagagggccaaggtgctggaggttaaaggttcaggcctgcttggtgggaacaaaaccatt
ctgatactaccgtctgatatggccagtcgtttgctgtgcagctcatttgagagcagtgga
gggttaccacaactgacacgctacgactgcgaggtcaacgctcctattcaggaccgtcac
tccctgctgcagggcgaggagctgctgcgtgctctggaccaagttaactga
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