Pangasianodon hypophthalmus (striped catfish): 113545206
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Entry
113545206 CDS
T05759
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113545206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113545206
03036 Chromosome and associated proteins [BR:
phyp03036
]
113545206
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113545206
Coactivators
SAGA/TFTC/STAGA complex
113545206
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
113545206
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TraP
Motif
Other DBs
NCBI-GeneID:
113545206
NCBI-ProteinID:
XP_026800213
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
MSESESANDFQKIDDSAEKAREAPETGATPAAPCTQVSEKHNAPDATSASHTSAKDSILT
QESKTQSPEPCEALKNHPAEAEAPSSSMLPNPVTSSLTSASMAPTPKVIVSCAPGRSATP
LVVGARVVSAAISAAGASGQTSASHPGGLTVMSNQVRPPAVTQAPLRAAIMALPRASNVT
PQNVTVPRSPQTTSLQLPANFQIPQGMVLIRSDSGQLMLVSQQALAQAQAQGLVPKSSNV
TTTVRPQASQATATSIIRVSLPSSSTTVATLVKPGSSAAKAVLKPSSTTGTATIKPTTTA
STIIKPPSVLGTGLKPSSITGPTVIKAPSAQKPPISTTTATISQRTITGTSVPSTSVVKS
IGKASLSSSVTQSSRPVGSGPRNISPNIPIKASSSSKVSTPVTVTAETLENVKKCKNFLI
TLMKLASSGTRSPDMAQNVRALVKDLLDGRLEAEEFTEKLYMELKSSPQPYLVPFLKRSL
PAVRQLTPNSQLFIQQCEQPKASSSSTVSSSAQKLSHSSSTTISQPLRGSVPAGPPQMVI
QQTKGVIVEQSVTSSPRVVLPVQNHTQPKHPVIQTNTQAAGAFRKQYSLQASKTPSGPTQ
AAQTYNFKDSTSGSFRDDDDINDVASMAGVNVNEENARILASSSELVGTVVRSCRDEPFL
QTTALQQRVLHIGGSLGVAEVNPDVLGLLSHATQERLRVLLEKLTVIAQHHSISYRDDWR
NIQTSDTRSQLKFLEQLEKVEKQKREEEERETLLRIAKSRSSSEDPEQLRLKQRAKEMQQ
LELAQMEHRDANLAALAALGPRKRKPLETSGSGTNQVLGLRAQRTAQRVPTRVTFRDLIF
CMEQDRALRHSLTLYDAFLR
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaagcgaaagtgcaaacgactttcaaaagatagatgattcggcagaaaaagcg
cgtgaagctccagaaacaggagccactccagcagcaccgtgcactcaggtatcagagaaa
cacaatgcacctgatgccaccagtgcgtctcacacttcagccaaagactcaatacttaca
caagaaagtaaaactcagtcaccagagccatgtgaggcacttaaaaatcatcctgctgaa
gctgaagctccttcctcgagcatgctccccaatcctgtgacctcctctctaacatctgcc
tccatggctccaacaccaaaagtcatagtgagctgtgcgcctggcagatctgccacgccg
ctggtggtgggggcgagagtggtgtcggcagctatttcagcagccggggccagtgggcag
acctcagcttcacatcctggaggactcactgtgatgtctaaccaggtcagacctccagca
gtgacccaagctcctctccgagcagcgatcatggctttaccgagggcatcgaatgtaacg
ccgcagaatgtaacagtgccacggagtcctcagactacatctctccagctacctgccaac
ttccagattccacaaggtatggttttaattcgcagtgacagtgggcagttgatgttggtt
tcccagcaagctttggctcaagcacaggcccagggcttagtgcctaaatcatccaatgtc
actacaacagtaagaccacaagcctcccaggcaacagccacatctatcatcagagtctct
ctgccatcttcatctacaacggtagccaccttagtaaaacccggctcctcggcagcaaag
gctgttctgaagcccagctccaccacgggcactgccacaatcaaacccaccactacagca
agcactattattaaacccccctcagtgttagggactggccttaagccaagctccatcaca
gggcccaccgtcattaaagctccctctgctcagaaacctccgataagcaccacaacagcg
accataagccaaaggaccatcactggcaccagtgttccctctacatctgtagtgaagtct
attggcaaggcatcactttcttcatcagttactcaaagcagtcgcccagttggcagtggc
cctcgaaatatctccccgaatattcccatcaaagccagcagcagcagcaaagtctccacc
ccggtcactgtcacagccgagacactggagaatgtaaagaaatgtaaaaattttctgatc
actctaatgaagctggcatcaagtgggacccgctcacctgacatggcacagaatgttcga
gctctggtcaaagacctgctggatggacgactggaagctgaggagttcactgaaaaactt
tacatggagctgaaatcatccccccaaccgtacctggtgccctttcttaaaaggagcctt
cctgctgtgcgtcagctcacaccaaactctcagctcttcatccagcagtgtgaacagccc
aaagcctcctcttcatccacagtcagcagcagtgcccagaaactcagccattcttcctcc
accactatctctcagcctctccgaggcagtgtaccagccggaccccctcaaatggtgatc
cagcaaaccaaaggagtgattgtggagcaaagtgtgacctcctcaccccgtgttgtgttg
ccagtgcagaaccacacacagcccaagcatccagtcattcagaccaacacacaggcagca
ggagcttttaggaagcagtattctctccaggcatctaaaaccccctctggaccaactcaa
gcagcacaaacatacaatttcaaggacagcacctcaggctcattccgcgatgatgatgac
ataaatgacgtggcctccatggcgggtgttaatgtgaatgaggagaacgctcgcattttg
gcgtccagttcagagctggtgggcacagtggtgcgctcatgcagggacgagcccttcctg
cagaccacagcactgcagcagagagtgcttcacattggtggttctctgggtgtcgcagag
gtgaatccagatgtgcttgggttgctttctcatgccacacaggaaagacttcgagttctg
ctggaaaaactcactgttatagcacaacatcacagtatctcttacagggatgactggcgg
aacattcagaccagtgacacacgctcccagctaaagttcctggagcagctggagaaagtg
gagaaacaaaagagagaagaggaggagagagaaaccctgctgcgcatcgctaagagtcgc
tcgagcagtgaggaccccgagcaacttaggctcaaacagagagcgaaagagatgcagcag
ctggagctagctcagatggagcacagagatgctaacctggcagcacttgcggctctcggg
cctcgtaagaggaaacctctggagacttctggctctgggactaaccaggttctgggttta
cgtgcacagagaactgctcaaagggttccgacacgtgtgactttcagagatctgatcttc
tgcatggaacaggaccgtgcacttagacactcccttacactctacgatgctttcctacgg
tag
DBGET
integrated database retrieval system
