Pangasianodon hypophthalmus (striped catfish): 113545243
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Entry
113545243 CDS
T05759
Symbol
mysm1
Name
(RefSeq) histone H2A deubiquitinase MYSM1 isoform X1
KO
K11865
histone H2A deubiquitinase [EC:3.4.19.-]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phyp01002
]
113545243 (mysm1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113545243 (mysm1)
Peptidases and inhibitors [BR:
phyp01002
]
Metallo peptidases
Family M67
113545243 (mysm1)
Ubiquitin system [BR:
phyp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
113545243 (mysm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
JAB
Prok-JAB
Myb_DNA-bind_7
Myb_DNA-bind_6
SKA1
Motif
Other DBs
NCBI-GeneID:
113545243
NCBI-ProteinID:
XP_026800279
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MADEVDVVDIEGDECDADDGDLTRAMILQDQYFQSAWRTDPAVLPWTLDNSISDENREII
ESMLLEEQYYFAGKKVPKVAWTDEKPKVKKSPVKSSGASARWAQEEKDLFEKGLAQFGRR
WTKIAKLIGTRTVLQVKSYARQYFKNKAKAEGHAEVSSTKSQSALLHALPSGSSPPSVQP
QAAALANAVRIERLSDDEDVDITDDLSDDASQPENQLDFRDEPKGLDQPQDQRGQTQIVF
SAGKLNNDVSDVVETSDPPAEFVSEGNSSHFHTVTEPEPGDHRESWYIKPQPQHDDECTE
DKDKEKSPLEDTEEQDEEEELKPPEQEVTLDTSTITEEEKQAIPEFFEGRLSKTPERYLK
IRNYILDQWEKSKPKYLNKTSVRPGLKNCGDVNCIGRIHTYLELIGAINFNCEQAIYNRP
RPVDRSRLKESRDSLEAYQLAQRLQSMRTRKRRVRDAFGNWCDARDLEGQTYEHLSAEEL
ALRREEMRKRQPKPCKLPKRGSFDPFQLIQCKAFGEERKEPFRVIVCAEALVVMDVHAHV
SMGEVIGLLGGSYDHEDKVLKICAAEPCNSLSTGLQCEMDPVSQTQASEMLGVKGHSVVG
WYHSHPAFDPNPSVRDIDTQAKYQNYFSRGGAPFIGMIVSPYNPSNSSPVSQNTCLLVQE
ETGSAGPQKLPYKFEYQVSTEPPDLMEVMRRAEWVVFKYRQSYGSVPMERLYRRDSSLTC
LEKMLTSLRKILEEIPETENFLVQIEALFVTHFIDKQETEQASGSSSHLHEQFKQFPSHT
FTTSELMDSSEVLDYEETCSTEEQSIINASSSDKGLNSSDSGDQL
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggtggatgttgttgacatcgaaggagacgaatgtgatgcagatgatggt
gatcttaccagagcaatgatcctccaggatcagtatttccagtcagcatggaggactgac
cctgctgtgctgccctggaccctggataactcaatcagcgatgagaacagagagatcatt
gagagcatgttgctggaagagcagtattattttgctgggaagaaggttcctaaagtggcg
tggactgatgaaaagcctaaagtaaaaaagtcaccagtgaagagctctggagcttcagct
cgttgggcacaagaggagaaagatctctttgagaaaggactagctcagtttggtcggagg
tggaccaaaatcgcaaagctgatcggcactaggaccgttcttcaagtgaagagctacgcc
aggcagtactttaaaaacaaggctaaagctgaaggtcatgctgaagtgtcttccactaag
tcccagagtgcactgcttcatgcgctaccgtctggatccagccctccctctgtgcagcct
caggccgctgctctggccaacgctgtacgcatcgaacggctgtctgacgatgaggacgtg
gacatcaccgatgacctgagtgacgatgcgagtcagcctgagaaccagttagatttcagg
gacgagcccaaaggcttggaccagcctcaagaccaaagaggtcaaactcaaatagtgttc
tctgcaggcaaactaaacaatgacgtctcagatgtagtggaaacgtctgatccacctgct
gagttcgtctctgaggggaacagcagccactttcacacagtgaccgagccagaacctgga
gatcatagagagtcctggtacataaaaccacagccccagcatgacgacgagtgcactgaa
gataaagataaagagaagagtccactggaggacacagaggagcaggacgaagaggaggag
ctgaagcctcctgaacaggaagtaacattggacacaagcaccatcacagaagaagaaaag
caggccatcccagaattctttgagggtcgtctgtcaaagaccccagagcgatatctgaaa
atccgcaactacatactggaccagtgggagaagagcaaacccaagtacttaaataagacg
tcagtgcgtccaggcttgaagaactgcggggatgtgaactgcattggccgaatacacact
tacctggagctcataggggctatcaacttcaactgtgagcaggctatctataaccgtcct
cggccggtggaccgctcgcgtctgaaggaaagcagagacagtctggaggcctatcagctg
gctcagagactacagtccatgcgcacaaggaaacgacgagtgagagatgcctttgggaac
tggtgtgatgcccgtgacctggagggccagacttatgagcatctgagtgcagaggaactg
gcccttaggagagaggagatgagaaagaggcaaccaaagccctgcaaactgcctaagcga
ggctcttttgatccattccagcttatccagtgcaaagcctttggagaggaaagaaaggaa
ccgttccgagtgatagtgtgtgctgaagctctggttgtcatggatgtgcatgctcatgtg
tctatgggagaggtgatcggactcctgggtggatcttacgatcatgaggacaaagtgtta
aagatttgcgcagcagaaccatgtaacagcctcagcactggactgcagtgtgaaatggac
cccgtctcccagactcaagcgtctgagatgcttggggtcaaaggtcacagtgtagttgga
tggtatcactcgcatccagcttttgacccaaacccttcagtcagagacattgacactcag
gctaagtaccagaattatttctctcgaggaggagctccatttataggaatgattgtgagc
ccatacaaccccagtaactcctcccctgtgtctcagaatacgtgtctgctggtgcaggaa
gagactggatctgctggccctcagaagcttccgtacaagtttgagtatcaagtctccact
gagccaccagacctgatggaggtgatgagaagagcagaatgggtggtgttcaagtacagg
cagtcgtacgggtctgtgcccatggaaagactctaccgcagagactcctcgctcacatgc
ctggaaaagatgctcacatcacttaggaagattctcgaggagatcccagagacagagaac
tttctggtccagatcgaagctttgttcgttacacatttcatagataagcaagagacagag
caagcttctggctcctcctctcatcttcatgagcaatttaaacagtttccttcacacacg
ttcaccacctccgagctgatggacagtagtgaagtcttggactatgaggagacgtgttct
acagaggagcagtccatcattaacgctagcagttctgataaaggcttgaatagctcagat
tctggagaccaactgtag
DBGET
integrated database retrieval system
