Pangasianodon hypophthalmus (striped catfish): 113545256
Help
Entry
113545256 CDS
T05759
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113545256
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
113545256
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Big_grain_1
Zn_ribbon_tTFIIB
Kinase-PolyVal
DUF3404
Motif
Other DBs
NCBI-GeneID:
113545256
NCBI-ProteinID:
XP_026800308
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MSARQCKNCGGADIDIDQARGSAVCTACGSVLEDNIIVSEVQFVENSGGGASAIGQFVSA
DGPAKAPVLGSGFHTSLGKESRAQTLQNGKRQIHSLGSQLQLNQHCLDTAFNFFKMVVSK
HLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINAPA
VDPCLYIPRFAHMLEFGEKTHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
EFRRTVKEVIGVVKVCEATLRKRLTEFEDTPTSHLTIDEFMRVDLEEECDPPSFVAGQKK
LKIQQLEQELARKLDEYQGEISSYQDEIETELENSRPKLRGIYAMYAREDTNDGSLSLVS
DLAGDEDMEDEEMEAAAQHLSEDFINQVLPELEQGPQGGTEAQEQGKEVAELPSGSTHVP
LTSLLGPLPSAASLGLTDSIRHCMTEEEADEDKSDNGELDLEGIDEDEIEKYILNEKEVQ
AKTELWMKQNEEYLREQKEKEERIAKEKEQGIYKEKPKKTSKRREPIRASTAGEAIEKML
EQKKISSKINYDVLRDLNSKGSSSPAHKTEEESGIVPGRKKLTRRKKQPNKSNLGLAKPA
SLMGKRLRPLISSNPKKKRAATQIVPSAVMLPPVTPETPPAPTPPPVIESGPVTYEEPTE
EEEDEEVEEPCVSAMKLMGGNEYGCEAEEEEVF
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctaggcagtgtaagaactgtggtggagcggatattgatatagaccaggcgcgt
ggaagtgctgtgtgcaccgcctgcggctctgtgcttgaggacaacatcatcgtgtctgag
gtgcagtttgtggagaacagtggaggaggcgcatctgctatcggacagtttgtgtctgct
gatggtcctgcaaaggccccagtgcttggaagcggcttccacacaagtcttgggaaggag
tcacgtgctcagacacttcagaatgggaaacggcaaatacacagcctgggcagccagctg
cagctgaaccagcactgcctagacacagccttcaacttctttaagatggtggtgagcaag
catttgacaagagggcgcaagatggcccacgtcatagctgcctgcctctatctggtgtgc
cggacagagggcactccccacatgctcctggacctgagcgatctcttacaggtgaacgtg
tatatcctgggaaagacttttctgctgttggccagagaactctgcattaacgcgcctgct
gtcgatccatgtctgtatattccacgctttgcacacatgttggaatttggagaaaaaacc
catgaagtgtccatgactgctctgagactgctgcagaggatgaagagagactggatgcac
acaggacgcagaccatctggactctgtggcgcagctctgttggtggcggcccgcatgcat
gaattccgccgcacggtgaaggaggtcattggtgtggtgaaagtatgtgaggcgactctc
agaaagaggctgacagaattcgaagacacacccaccagtcacttgacgattgatgagttc
atgcgagtggacctggaggaggagtgtgatcccccttctttcgttgctggtcaaaagaag
ttaaagatccagcagctggaacaggagctggccaggaagcttgatgaatatcaaggtgag
atcagctcctatcaggatgagattgagacagaactggagaacagcaggcctaaattgaga
ggaatttatgccatgtatgcaagagaagacaccaatgatggcagtctgtctctggtgtcg
gacctcgcgggagatgaagacatggaagatgaggagatggaggctgcagctcagcacctc
agtgaggacttcatcaaccaagtgttacctgaactggagcagggacctcaggggggcaca
gaggcacaggagcagggcaaagaggtagcagagctacctagtggctccacccatgtgcca
ctgacttcactgcttggcccgcttcccagcgctgccagccttggcctcacagactctatc
cgccattgcatgactgaggaggaggcggatgaggacaagtcagataatggcgaacttgat
ctggaaggcatcgacgaggatgagatcgaaaagtacattctcaatgagaaggaggtgcag
gctaagacagagctgtggatgaagcaaaatgaggagtatctaagggagcagaaagaaaaa
gaagagaggatagctaaggagaaagagcaagggatctataaggagaagcccaaaaaaaca
tccaaaaggcgagagcccattcgggccagcactgcaggagaggcaatagagaagatgctg
gaacagaagaagatttcaagcaaaattaattatgatgtactgcgagacctgaacagcaaa
ggcagcagcagccctgcacataagacagaggaagagtctggtattgtccctggacgtaag
aagctcacccgccgcaagaaacagcccaacaagagcaatctgggtctggccaagcctgca
agcctcatggggaaaaggctccgcccccttatatcttcaaatcccaagaagaaaagagca
gctacacagattgtgcccagtgctgtgatgctgccgccagtgacccctgagactccgcca
gcccctactcctcctccagtcatagagagtggccctgtgacatatgaggagcccactgag
gaagaagaggacgaagaagtggaagagccctgtgtcagtgctatgaagcttatgggagga
aacgaatatggctgcgaagccgaagaggaggaagttttttaa
DBGET
integrated database retrieval system
