Pangasianodon hypophthalmus (striped catfish): 113545300
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Entry
113545300 CDS
T05759
Symbol
usp24
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phyp01002
]
113545300 (usp24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
phyp04121
]
113545300 (usp24)
Enzymes [BR:
phyp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113545300 (usp24)
Peptidases and inhibitors [BR:
phyp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113545300 (usp24)
Ubiquitin system [BR:
phyp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113545300 (usp24)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA
UBA_7
Motif
Other DBs
NCBI-GeneID:
113545300
NCBI-ProteinID:
XP_026800386
LinkDB
All DBs
Position
Unknown
AA seq
2638 aa
AA seq
DB search
METEEEQHMTTLLCMGFPDPVAIRKALRLAKNDINEAVAFLTNESPGLGFGYEPMESGPS
PGSGPGGDRDTSGRTGSSSSSGGGGGGGGGGSGGFDPPPAYHDVVESERANDENGNCSGG
NMEFPTTNLYELESRVFTDHWSIPYKREESLGKCLIASTSLARMGLADADENCKRFMDRC
MPEAFKKLLMSSAVHKWGTEIHEGIYNMLMLLVDLVAERVKQDPIPIGLMGVLTMAFNPD
NEYHFKNRMKASQRSWAEVFGEDSMFAVSPSSSYQKEPHGWLVDLVNRFGEMGGFTAIQS
KLNQEEMEIGCVSALVQPLGVCAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLV
SIPDLLSAIKLLCMRFQRELVNVVDDLRLDILLRMLKTPHFSAKMNSLKEVTKLIEESTV
SKTVKNAIDTDRLLDWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELSKIW
KIQSGQSSTVIENIHNIIAAAAVKFNCEQLNHLFVLIQKSWEVETDRVRQKLLSLIGKIG
REARSETTTGKVLEVLWELAHLPTLPTTLVQQALEEHLTILSDAYAVKETVKKSYIIKCI
EDIKKIQIQEDSKSTSEIQVSFFTGSWGKKKPAWAKSSQQSNPQSVWVVPALRQLHEITR
SFIKQTYQKQDKSIIQDLKKNFEIVKLITGSLVACHRLAVTAAGPSGLSGSTLVDGRYTY
QEYLEGHLKFLAFFLQEASLYLVWNRAKEIWECLVSGMDVCELDREMCFEWFTKGQHDLE
SDVQQQLFKEKILKLEPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLIGMD
FIWRIAMESPDEDIANEAIQLIITYSYINLNPKMKKDSVSLHKKFIADCYKRLEAASSAL
GGPTLTHAVTRATKMLTATAMPTVATSVQSPSRSTKLVIIERLLLLAERYVITIEDLYSV
PRTILPHGASFNGHPVTLHITYESTKDTFSLEAHSNETVGSIRWKIAEQLSCPVDNVQIF
ANDSMLTMNRDQKLLNQLGFSDEQSLTVKSSGTGTPSGSSADSSASASSSSSGVFNSAYA
LEQEKSLPGVVMALVCNVFEMLYQLANLEEPRITLRVRKLLLLIPTDPEVQDALDNFVPK
ESSVWSHQKTLFTLGSGSQASKSPSLSSKQQHQQSAASILESLFRSSAPGMSTFRVLYNL
EVLSSKLMPTSDDEMAKTSVKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSI
CLQLARFLLVGQTMPSILDEELSKEGVDTLSSRPFRNAGRQSGRQLSLCGTPEKSSYRQM
SMSDRSSIRVEEIIPAARVAIQTMEVGDFTSTVACFMRLTWAAAAGRLDLVGSSQPIRES
TNSLLPLGVRSRVSSTGSNCSSSSEGEVTTLQAGICVKQQCVSIKDTIIAREALSLLVTC
LQLRCQQLSSFYNLPCVNDFIIDILLGSPSGEIRRVACDQLYTLSQSDTSAYPELQKANL
FLLKVVLTAQLPLWSPTSVMRGINQRLLSQCTEYFDLRCQLLDDLTNSEMEQLQISPAAM
LEDEISWLDNFEPTWTSELETSEADNILQAGHLRLIKTLLSLCGNEKEQFGPSLIQQLLD
DFLFRASRIILNSNNPSSSTAPLHDFHPKCSTVSSRLAAYEVLVMLADSSITNLQLITRE
LLSMHHQADPSLSKEFDYLPPVDGRSISGFVGLKNGGATCYMNAVFQQLYMQPGLPEAIL
SIEDDTENPEESVFCQVQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFF
TSLVDQLDEHLKKIGREQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSL
EISLDQFVRGEVLEGSNAYYCEKCKEKRTTVKRTCIKSLPSVLVIHLMRFGFDWESGRSI
KYDEQIRFPWVLNMEPYTVSGMARQDSSSDHGENSRGGEAGPGGSPRKKVTISENYELVG
VVVHSGQAHAGHYYSFIKDRRGGSRSRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVY
DQSNPYPDVRRRYWNAYMLFYQRISEQNSPVLPKKSRVSVMRQEAEDLSLSAPSSPDISP
QSSPRPPRANNDRLTLLTRLVRKGEKKGLFVEKMPARIFQMVRDENLKFMKNRDVYNSDY
FNFTLSLASVNSTKLKHQSYQAMAKTSLQLAVQFLFHTYLRTKKKLRVDTEEWIATVEML
LSKSSEACRWMVQYLVAAEGREIIKNCLLECNVREVRVVVASILEKTLESALCFQDAGLD
CLLDMLLSLLDKDVPENCKNCSQYFSLFSNFAQRGFGPCQLLLKHAAYRRMLIFLLGPNR
QNNQNRRWNSAQAREFLHLHNTLALVVLHTDLTSQRTETPGTFKHSSSGLVSSTSLLPLH
PDVNTLLFKPEGQPYLMEVMFAMRELSGPLSFLIEMVTYCCFCNEPFSLGVLHLLKNQLE
TAPPHELKNVFQMLLEILMVEDPLQSQRLKYAFESEKGLLALMHQSNNVDSSRCYQCVKF
LVTLAQKCAPAKDYFKELSGHWSWAVQWLQKKMSEHYWTPQSNVSNETSTAKTFQRTISA
QDTLAYATALLNEKEQSGSSNGSDGSPANENSDRSLRQGSESPMMLGDSKSDLEDVDP
NT seq
7917 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaggaagagcagcacatgacgacgctcttgtgcatgggctttccggatccc
gtcgccattcggaaagcgctgcgtctggccaagaacgacatcaacgaggccgtggctttc
ctgaccaacgagagccccggactcggctttggctatgagccgatggagagcggccccagc
ccgggctcagggcccggcggagaccgcgacaccagcgggaggaccggcagcagcagcagc
agcggtggcggcggcggaggcggaggaggaggcagcggcggcttcgaccctcctcccgct
taccacgatgtagtagaaagcgagagggctaacgatgagaatgggaactgttcagggggc
aatatggagtttcccaccaccaacctgtacgagctggagagcagggtgttcactgaccac
tggtcaatcccatacaagagagaggagtcactggggaagtgtctcatcgcctccaccagc
ctcgccagaatgggcctggctgatgcagatgagaactgtaagagattcatggacagatgc
atgcccgaggccttcaaaaagttgttgatgtcaagtgcagtgcataagtggggcacagag
atccatgagggcatctacaacatgctgatgctgctagttgatctagtggcagagagggtc
aaacaggaccccatccctattggcctaatgggagtactcactatggcttttaaccccgat
aatgagtatcactttaagaaccgtatgaaggcgagtcagaggagctgggccgaggtgttt
ggggaagacagcatgtttgccgtctctcccagctccagttaccagaaggagcctcacgga
tggctggtggaccttgtgaatcggtttggagaaatgggtggcttcactgccattcagagc
aagctgaatcaagaggagatggagattgggtgtgtgtctgcgctggtgcagccgcttggt
gtgtgtgcagagtacctgaactccagcctggtccagccaatgctggacccggtcatccac
aagatgatcacatatgtgcagaatcttgaagagaaagacctaaaggacaagaggttggtg
agcattccagaccttctctccgccatcaaactgctatgcatgaggttccagcgggagctg
gtcaatgtggtggatgacctgaggttggacatcctcctgcggatgctcaagacccctcac
ttcagcgccaagatgaactcactcaaagaggtcaccaagctgatagaggagagcacggtg
tctaagacagtgaagaacgccatagatacggaccggctcctcgactggctggtggagaac
tcggtcctctcgatagcactggaaggaaacattgaccaggcgcagtattgtgataggata
aagggaatcattgagctgttgggcagtaaactctcactggatgagctttcaaagatctgg
aaaatacaatctggccagtcctccaccgtcatagagaacatccacaacatcatcgccgca
gcagccgtcaagttcaactgcgagcagctcaaccacctctttgtcctcatacaaaaaagc
tgggaggttgagactgatcgagtcaggcagaagcttttgagtctgatcgggaagatcggc
agagaggcacgctcggaaacaacaacaggaaaggtgttggaggtgctctgggagttggcc
catcttcctactcttcccaccactctggtccagcaggccctggaggaacacctgaccatc
ctgagcgatgcctacgctgtcaaagaaactgtcaagaaaagctacatcatcaagtgtatc
gaggacatcaagaagatacaaatacaggaggattcaaagtctaccagcgagatacaggtg
tctttttttactggctcctggggcaagaagaaaccagcctgggctaaatcatcccagcag
agtaacccccaatcagtatgggttgttccagccctacggcagctccatgagattactcgc
tccttcatcaagcagacataccagaaacaggataagagtataattcaggacctgaagaag
aattttgagatcgtgaagctgatcacaggctctctagtggcatgccatcgtctggccgtg
acagccgctggccccagtggtctctcagggtccactctggtggatggacgatacacttat
caagagtatttggaagggcatctgaagtttttggcattctttctacaagaagccagtttg
tacttggtgtggaacagagctaaagagatctgggagtgcttggtgtctggcatggacgtg
tgtgagctagaccgggagatgtgttttgaatggttcactaaaggacaacatgatcttgaa
agtgatgttcagcaacaactcttcaaagagaagatccttaaacttgagccttatgagatt
actatgaacgggtttaatctttttaagaccttctttgagaatgtgaatctctgtgatcat
cgtctcaaacggcagggaactcaactgtgtgtggagcgcttagacctaatcgggatggac
ttcatctggagaattgccatggagtctcctgatgaggacatcgccaacgaggccattcag
ctcatcatcacctacagttacataaatcttaaccccaaaatgaagaaggattcagtgtcc
ttacataagaagttcatagctgattgttataagaggttggaggctgccagctctgccctg
ggtggcccaaccttaacccatgctgttacacgagcaaccaagatgttgacagctactgcc
atgccaaccgtcgccacatcagtgcaatcaccctccaggtctactaagctggttatcatt
gagcggctgctgttactggctgagagatatgtcattactatcgaggatctgtactctgtt
cctcggactattctacctcatggagcttctttcaatggccaccctgtaacgctccacata
acctacgaatctaccaaagacactttcagcttggaggctcacagtaatgagacagttggg
agcatcaggtggaagattgcagaacagcttagctgtccggtggacaatgtgcagatattc
gccaacgacagcatgctgaccatgaacagggaccagaagctgttgaatcagctgggtttc
tccgatgagcagagtctgacagtgaagagctcaggaactggcactccatcaggcagctcg
gcagacagctcggcctccgccagctccagcagcagcggagtcttcaactcagcatatgca
ctggagcaggagaagtctctgcctggtgtcgtgatggcgttagtgtgtaacgtgtttgag
atgttgtatcagctggctaacctagaggagcctagaataactttacgtgtgcggaagttg
ttgctgctcatcccaactgatccggaggtgcaggatgccctggataactttgtaccaaaa
gagtccagtgtgtggagccaccagaaaactctgttcacattgggttctggatctcaggcc
tccaagtctccatctctgtccagcaagcagcagcatcagcagagtgcagcatccatcctg
gagtcattgttccgctcctctgccccgggcatgtccactttcagagtgctctataatctt
gaggtgctgagctcaaaattgatgcctacctcagatgatgagatggcaaagactagtgtg
aagtccttctgtgagaattttctcaaagctggaggtcttagtctggtggttaatgtcatg
cagagggactcgatcccctctgaagtggactatgagaccagacagggagtctactccatc
tgcctgcagcttgcaagattcttactagtaggacaaacaatgccaagcatcctggatgaa
gagttgagtaaagagggtgtggacacactgtcctctcggccctttcgtaatgcgggcagg
cagagcggacggcagctctcgctctgtggaacgccggagaaatcctcctacagacagatg
tccatgtctgataggtcctccattagagtagaggagattataccagcagcacgtgttgcc
attcagacaatggaggtgggagactttacttctacagtggcctgcttcatgcgcctcacc
tgggctgcagctgctggccgattggacctcgtgggcagcagccagccaatcagagagagc
accaattctctgctgcctctgggagtccgtagcagggttagcagcacaggcagtaactgc
agctccagcagtgaaggagaggtcaccacattgcaggccggcatctgtgtcaaacaacag
tgtgtgtccattaaagatacaatcatcgctcgagaagctctttcactcttggtcacctgc
ctgcagcttcgctgtcaacagctttcttctttctataacctgccctgtgtgaatgatttt
atcatcgatattctgctgggatctcccagtggagagatccggcgggtggcatgtgatcag
ctgtacactttgagtcagagtgatacatcagcatatccagagctgcaaaaggccaatctg
tttctgctaaaggtggtgttgactgcccagctcccactctggtctcccaccagtgtcatg
aggggcatcaaccagaggttgctttcacaatgcacagagtattttgacctgcgatgccaa
cttctggatgatctgactaactcggagatggagcagctgcagatcagcccagcagccatg
ttggaggatgagatcagctggctggataactttgagccaacgtggaccagtgagctggag
accagcgaggctgacaacatcctgcaggccggccatctgcgcctcattaagaccctgctc
tcgctctgcggcaatgagaaggagcagtttggcccctcccttatccagcagctgctggat
gacttcctgtttcgagcatcacgcattatcctgaatagcaacaacccttccagcagcaca
gcccctctccatgacttccacccaaagtgcagtacagtcagcagtcggttagcagcgtat
gaggtgttggtgatgttggctgacagctctatcaccaacttgcagcttatcactcgagag
ctgctctctatgcaccaccaggccgacccctctctctctaaggagttcgattacctccca
ccggtggatggccgctccatatcggggttcgtggggctgaagaatggtggggcgacctgc
tacatgaacgctgtctttcagcaactctatatgcagcctggcttacctgaggcgatcctg
tcgatagaagatgacacagagaacccagaggagagtgtgttctgtcaagtgcagtccctt
tttggccatctgatggagagcaagttgcagtactacgtacctgagaacttctggaagatc
tttaagatgtggaacaaggagctgtatgtgcgagagcagcaggatgcctacgagttcttt
accagcctcgtggaccagttggatgagcatctgaagaaaattggaagagagcagatcttc
aaaaatacattccagggtattttctctgaccagaaaatatgcaaagactgtccacacaga
tatgagcgtgaggaaaccttcatggcactgaatctaggggtgacgtcatgtcagagtttg
gagatttctctcgatcagtttgtcagaggagaggtgctggagggcagcaatgcttactat
tgtgagaaatgcaaagagaagaggactacagtgaagcgcacatgtattaagtcattgccc
agtgtgctggttatccatctcatgcgatttggcttcgactgggagagtggacgctccatt
aaatacgacgaacagataagattcccgtgggtgctgaacatggagccgtacacagtgtct
ggcatggctcgacaagactccagttcagatcacggagagaacagcagggggggagaggct
gggcctggaggctccccacgcaagaaagtcaccatttctgagaactatgaacttgtggga
gtggtggtacacagcggtcaggcacatgcaggacactactactcctttataaaagaccgc
agggggggttcgcgaagcagatggtacaagtttaacgataacgttgttgaagagtttgac
atgaacgatgaaaccctggagtacgagtgttttggtggagagtacagacccaaagtctac
gatcagtctaacccatatccagatgtgcggcgacgctactggaatgcttatatgctgttt
taccagcgcatcagtgagcagaactcgcctgtgttacccaaaaagagccgcgtcagcgtc
atgagacaggaagccgaggacctgtccctgtctgccccatcctctcctgacatttccccc
cagtcatccccacgaccccccagagccaataatgaccggctcactctgctcacccggctg
gtcaggaagggcgagaaaaagggcctctttgtggaaaagatgcctgccaggatcttccag
atggtgagggatgagaacctaaaattcatgaagaacagagatgtgtacaatagtgattac
tttaacttcaccctgtcactggcctccgtcaactcgacgaagctgaagcatcaatcctat
caggccatggcgaagaccagcctgcagctggctgtgcagttcctgttccacacttacctg
cgcaccaagaagaagcttcgggttgatacagaggagtggatagctacagtggagatgctg
ctgtctaagagcagtgaggcatgtcggtggatggtgcagtatctggtggccgctgaggga
cgggagataatcaagaactgcctgttggagtgtaatgtgcgggaggtgcgtgtagtggtg
gcctccatccttgagaaaactttagagagtgcactatgtttccaggatgcagggctggac
tgccttttagacatgctgctctctttgcttgacaaggacgtaccagagaactgcaaaaac
tgctcacagtacttcagcctgtttagtaactttgcacagaggggattcgggccttgtcaa
ctactgttaaagcatgctgcttatcgaaggatgctcatcttcctgttgggtcctaataga
cagaacaatcagaaccgccggtggaattcagctcaggcacgagagttcctacacttgcat
aacacgcttgccctggtggtgctacacacagacctcacatctcagagaacagagactcct
ggaacgttcaaacatagctcctctggcctagtgtcttcaacctcactcctgccactgcac
ccagatgtcaacacactgctgttcaaacctgagggacagccttaccttatggaggtaatg
tttgctatgcgtgagctgtctggaccgctgtccttcctcatagagatggtgacatactgc
tgcttttgtaacgagcctttctctctgggagtgctacatctgcttaagaatcagctggag
acagctcctcctcacgagctcaagaatgtcttccaaatgcttctggagattctgatggta
gaggaccctctgcagtcccagagactcaaatatgcattcgaatctgagaaagggcttctg
gctttgatgcatcagagcaacaatgtggacagcagccgctgctaccagtgtgtcaagttc
ctcgtcactttagctcagaagtgtgctcctgctaaagactacttcaaggagctgtcaggg
cactggagctgggcagtgcagtggctgcagaaaaagatgtcagaacattactggacacct
cagagtaacgtgtccaatgagacgtccacggctaaaaccttccagcggaccatctcagca
caggatacattggcctatgccacagctctgctgaatgaaaaggaacagtctggcagcagt
aatggctctgatggcagcccagctaatgagaactcagaccgcagcctcagacagggatcg
gagtctcctatgatgttgggtgattctaagagtgatttagaagatgttgacccctag
DBGET
integrated database retrieval system
