Pangasianodon hypophthalmus (striped catfish): 113545344
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Entry
113545344 CDS
T05759
Name
(RefSeq) interferon regulatory factor 4-like
KO
K09445
interferon regulatory factor 4
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113545344
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
113545344
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
113545344
NCBI-ProteinID:
XP_026800462
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MCSDGERAALGSSGNGKLRQWLIEQVDTGKYPGLVWENEEKSVFRIPWKHAGKQDYNRDE
DAALFKAWALFKGKYREGIDKPDPPTWKTRLRCALNKSNDFEELLDRSQLDISDPYKVYR
IVPEGAKKASRSLEDTTSNPSPPSYPLHASYAPLQSQVCGFISPAERSWRDYLSEKPPMA
DIPYNQNPYTSRWDTGYQFSGSFYSCSASEPLPSAFTLDASMKSAEAMALSDYRLHVAVY
FRDALVREVTVSSLEGCVLGVSKDGLPYGVSQGPELVELPQIEHSSLEHGVLLWMAPDGL
YARRCCPCRVYWEGGHSSPNNKPNKLQRDQTCKLLDTQQFITELQSYARHIRPPPMSQVL
LFFDEDSTEPQRPGRTLTVQVEPLFARQLLYFTHSSSMNYIRSHSLSPLSPEHTIPPSQD
FHRVISHHHSNSL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcggatggagaacgcgcggcgctgggcagctcgggaaacggcaagctgcgccag
tggctcatcgagcaggtggacaccgggaaatacccgggactcgtgtgggagaacgaggag
aagagtgtgttccggatcccgtggaagcacgcggggaaacaggactacaaccgggacgag
gacgcagcactcttcaaggcttgggcgctgtttaaaggcaaataccgggagggcatcgac
aaaccagacccccccacgtggaaaacgcgtctccgttgcgcgcttaacaagagcaacgac
ttcgaggagctgctggatcgcagtcagctcgacatttcggacccttataaagtttaccgg
attgttcccgagggcgccaaaaaagcctccagatctctagaggatacgacatcaaaccca
agccctccgagttatccactacatgcttcctatgcgcccctgcagagtcaggtctgtggc
ttcatttctccagcagagaggagttggagggattacctctcagaaaagccccctatggct
gacatcccttacaaccaaaatccatacacctctcgatgggatacaggataccagttcagt
ggctccttctatagctgcagtgcctcagagcctctgccgtctgcttttacactagatgcc
agcatgaagtcagcagaggccatggccctctcagattaccggctccatgtggcagtatat
ttccgggatgcccttgtgcgggaggtgactgtgagcagtctagaaggttgtgttctgggt
gtgagcaaagatggtttgccatatggagtctctcaaggtccggagcttgtggagcttcca
cagattgaacacagctctctggaacatggggttctgttgtggatggcaccagatgggctg
tatgctcgccgctgctgcccctgcagggtgtactgggagggagggcactcttcgcccaac
aacaaacccaacaaactacagagggatcagacgtgcaaactgctggacactcagcaattc
atcacagagttacagagctatgctcggcacatacgtcctccacccatgtcccaggtgctc
ctgttctttgacgaagacagcacagagccccagagaccaggaaggaccctcactgttcag
gtggagcctctctttgctcgacagcttctctattttacccactcaagcagcatgaactat
atccgcagccacagcctttcacctctgagcccagagcacacaattcccccaagtcaggac
ttccacagagtcatcagccatcaccacagcaacagtctgtaa
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