Pangasianodon hypophthalmus (striped catfish): 113545356
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Entry
113545356 CDS
T05759
Symbol
trappc8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113545356 (trappc8)
Membrane trafficking [BR:
phyp04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
113545356 (trappc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_3rd
Ig_TPPC8_2nd
Ig_TPPC8_C
Motif
Other DBs
NCBI-GeneID:
113545356
NCBI-ProteinID:
XP_026800483
LinkDB
All DBs
Position
Unknown
AA seq
1474 aa
AA seq
DB search
MARCAQSVQEFIQDSFVPMVAVLCSDDAERLSRKNNLSFPELLRPFCRLTSEGHLRDPNN
QIVVVKGLRISVTGVNTRPAHPTELDRLLSQAVSACQPPEGPAANVITAGDYDLNISDRS
VKASVPWYSDWRETFTQLSSSKYYTATTPWFEAYRESFLQSMPASDHEFLNHYVACMLVV
SSHEAVPTEQFQKLSQEQHRIQHSGEYTYPKWFIPNTLKYYVLLHDVSDGDEKRADSIYE
DMKQRYGTQCCYLLKINSGTGAARPDEQMPDPWSQYLQKNHIYSSEQYEEAMVNNVGENN
IQNNSEVDGLDTSDAITNTHPLKLDQTADPGYPCNPREAMNSVDMDLSRSQKQTPTSSQA
HGACLTLNDHDRIRQFIQEFTFRGLLPHIEKNIRQLNDQLVSRKGLSRSLFSATKKWFGG
GKVPEKSIAELKNTAGLLYPPEAPELQIRKMADLCFLVQHYELAYNCYHTAKKDFLSDQA
MLYAAGALEMAAVSAFLQSGAPRPYPAHYMETAIQTYRDVCKNMVLAERCALLSAEVLKS
QAKYSEAAALLIKMTSEDSDLRSALLLEQAAHCFINMRSPMVRKFAFHMILSGHRFSKAG
QKRHALRCYCQAMQVYKGKGWTLAEDHINFTIGRQSFTLCQQENAIAAFRHILIGDSKQS
ATQQSAFFREYLYVYRSVSQPSNESSLPQLPLPCLLCTQTRVFFGHERRLAEGEKQAATH
VWLDQEYDREQSQLWAELEEQVVAVVNRGSVPVSFQPTQYCLSSHTDNLRYPLAVVEEPI
IVEVVFRNPLKVPLALSELSLLWKFTPKDFSGPQGGTSGEPISNEKEAATGKATALNDLI
STEVIPEFPMSPEETKVARLKLLPHKTGELHVLGVVYNLGTGEEDSNTGEAASRLMCVRG
RQDLEIQGPRLNTTKEEKTSVRHGSDRRLEPIITPPMPLLEVFFINFPTGLLCGEIRKAW
VEFVNVSAVPLTGLRVVSTHPEFFTFGSATSDLTPVTPTAAEHCSAYKTMVMPPSVAAVT
LVSPASFGVTGDDRPTVAEIALTEGVLGPGEALQIPLWLRGPDREGVHEIHFLFYYESVE
KNAKLSHRVLRHTAFICASRSLSARVTACRSNTLPGKVRREEREEERCGSMLVFVDVENI
NTSEAGVREFHIVQVSSSSRQWRLHKCINPAGDKDSKLGSRERGKLCFRATRCRTQEATS
DTTEKYTFADLNLGNEQIVSSMTPCADFFFRRGPPSESRKGGVSPGGATHMRRQSLTPAG
RTDDSIMSVVRKCSEVELDIIVLWKAYVVEDNKQLILEGQLHVALQTIGKEACSLTQKEE
AQEMVLLKFKPDPPPPVSRPSLEQLSHLIKTCLHYPESYDHPFPQKSLCMVPVTLTLSNC
SLAQVDVIIDLRQKTTSPESLEVHGAFTWLGQTQYKLQLRPQEVHQLLLKACFFQAGVYN
LGTPRVFAKLAQSGTMCETSQQSAMPALIIINSV
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggctcggtgtgctcagtccgtgcaggagttcatccaggactcgttcgtgcccatggtg
gctgtgctgtgcagcgacgacgccgagagactgagccgcaaaaacaacctgagtttcccc
gagctgctgcggcccttctgccggctgacctcggaaggtcacctgcgcgaccccaataac
cagatcgtggtggtgaaggggctgaggatcagtgtgacaggagtgaacactcggccagcg
caccccaccgagctggacagactcctgagccaggccgtgtcagcctgtcagccccccgaa
ggacccgctgctaacgtcatcactgctggagactacgacctcaacatcagcgaccgctcg
gtcaaagctagcgttccctggtactctgactggagagaaacgttcacccagctcagctcc
tccaaatactatacagcaacaacaccatggtttgaagcatacagggagagttttctacag
tccatgcctgcatcggatcacgagttcctcaaccactatgtggcctgtatgttggtggtg
tcgtctcatgaagccgtgcccactgagcagtttcagaagctctctcaggagcagcacagg
atccagcacagtggagagtacacttaccccaaatggttcatccccaacaccctcaaatac
tacgtcctacttcacgacgtcagtgatggagacgaaaagagggcagactccatatatgag
gacatgaagcagaggtacggtactcagtgctgttacctgttgaagatcaactccggaaca
ggtgctgctcggccagatgagcaaatgcctgacccctggagtcagtatctacagaagaac
cacatctacagctctgagcagtacgaagaagctatggtgaataatgttggggagaataac
attcagaataactctgaagtggatggacttgacacctcagatgcaatcaccaatacccat
ccactgaaactggaccagacagctgacccaggttatccctgcaacccccgcgaggctatg
aacagtgtggacatggatctatcaaggtcacagaaacagaccccaacatcatcacaggct
catggtgcctgcctaaccctcaatgaccatgaccgcatccgccagttcatccaggagttc
accttcagaggactgctgccacacatcgagaagaacatccgccagctcaatgaccagttg
gtgtcaaggaaagggttaagtaggtctctgttctcagctacaaagaagtggtttgggggt
ggcaaggttccagagaagagcattgctgaactaaaaaatactgcaggactgctatacccc
ccagaagcccctgagctgcaaattagaaagatggctgacctgtgctttctggttcagcac
tatgagttggcctacaactgctaccacactgccaagaaggacttcctctctgaccaggcc
atgctgtatgctgctggagcactggagatggctgctgtatctgcgtttctgcagagtgga
gcccccaggccgtaccctgcccactacatggagacagccatccagacatatcgagatgtc
tgcaaaaacatggtcctggcagagcgctgtgctctgttgagtgctgaagtactgaagagt
caggccaaatactcagaagctgcagctctcctcatcaagatgaccagtgaggactctgac
ctgcggagtgcgctcttattggagcaggcagctcactgcttcattaacatgcgcagcccc
atggtgaggaagtttgccttccacatgatcctgtcaggccaccgtttcagcaaagccgga
cagaagagacatgcattgcggtgttactgccaggccatgcaggtgtataaggggaagggc
tggactcttgccgaggatcacatcaacttcaccatcggccgacagtccttcactctgtgc
cagcaagagaacgccatagccgctttccgacacattctgatcggcgacagcaagcagtct
gccacgcagcagagcgccttcttcagggaatacctttatgtgtataggagtgtgagtcag
ccgtccaacgagagctctctgcctcagctgcccctgccctgcttactctgcacccagacg
cgcgtgttctttggccatgagcgcagacttgcggagggggaaaagcaagcagccacccat
gtgtggctggatcaggaatacgaccgggagcagtcacagctgtgggcggagttggaagag
caggtggtggctgtggtcaaccggggcagcgtgcccgtcagcttccagccaactcagtac
tgcctcagcagtcacaccgataacctgcgctaccccctcgctgtggtggaagagcccatt
atcgtggaggtggtgttcagaaatcctctgaaggttccactggctttgtccgaattgtct
ctgctgtggaaattcactcccaaggacttttctgggcctcaaggaggcacgagtggagaa
cccatctctaatgaaaaggaggcagccacaggcaaagccacagcactcaatgaccttatc
agcactgaagtcattccagagttccctatgagtcctgaagaaacaaaagtggctcggctg
aaattgcttcctcataaaacaggagagctacatgtcctcggtgtggtctacaatctgggc
actggagaggaggacagcaacactggtgaagcagccagtcgtttgatgtgtgtccgcggg
aggcaggatctggaaatccaggggccgagactgaacacgaccaaagaggagaagacctct
gtccgacacggatcagaccgtcgccttgaacctataatcactcctccaatgcctctgctg
gaggtgtttttcattaacttccccacgggcttgctatgcggcgagatcagaaaagcgtgg
gtggagtttgtcaacgtgagcgccgttcccctcactggcttgcgggtggtgtccacccac
ccggagttcttcaccttcggaagtgcgacctctgacctcaccccagtgacccccactgct
gctgaacactgctccgcctacaagacaatggtcatgcccccgtctgtggctgcagtgacg
ctggtatctcctgcatcgtttggcgtgactggggatgaccggcccacagtagctgagatt
gctttaacagaaggagttctgggacccggcgaggcactacagataccactgtggctcaga
ggccctgaccgagagggcgtgcacgagatccacttcctgttttactatgagagtgtggag
aaaaatgcaaagctcagtcaccgagtgctgcgccacacagccttcatctgcgcgagtcgt
tcgctgagcgcaagagtgacagcgtgtcgcagtaacacgctgccaggaaaagtcaggaga
gaggaaagggaggaggagcgctgcggcagcatgctggtgttcgtggatgtggaaaacatc
aacactagtgaagcaggagtgcgcgagttccacatagtgcaggtgtccagcagcagcaga
cagtggaggctacacaagtgcatcaatcctgctggagacaaagactctaagttgggcagc
agggagagggggaagctgtgcttcagggcaactagatgcagaacacaggaagctacctca
gacacaacagagaaatacacatttgctgacctaaaccttggcaatgaacagattgtcagt
tctatgactccatgtgcggacttctttttccggagaggtccgccctctgagtccaggaaa
ggaggcgtgtctccaggtggagccacgcacatgaggaggcagagcctcacacctgctggc
aggacggatgacagcataatgagtgtcgttcggaaatgcagtgaagtggaactcgacatc
atcgtcctttggaaggcttatgttgtggaggacaacaagcagctcattctagagggacaa
ctccacgttgctttgcaaactattggcaaggaggcatgctcactcacacagaaagaggaa
gctcaggagatggtgctgctaaagttcaagcctgatcctccacctcctgtcagcagaccc
tcactggaacagctttctcatctcatcaagacctgtctgcactaccccgagtcctatgac
caccccttcccacagaaaagcttatgcatggtaccggttaccttgactctgtccaactgt
tccttggctcaggtggatgtcatcattgacctgcgccagaaaacgacgagccccgagtca
ctagaggtgcatggtgcgtttacatggttggggcagacccagtacaagctgcagctgagg
ccacaggaagtccaccagctattgctgaaggcctgcttcttccaggctggtgtgtataac
ctgggcacgccgcgggtctttgccaagctcgcccagtcaggcaccatgtgtgagaccagc
cagcagagcgccatgccagctctaatcatcattaacagtgtgtga
DBGET
integrated database retrieval system
