Pangasianodon hypophthalmus (striped catfish): 113545499
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Entry
113545499 CDS
T05759
Name
(RefSeq) actin-related protein 3B-like
KO
K18584
actin-related protein 3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04144
Endocytosis
phyp04517
IgSF CAM signaling
phyp04519
Cadherin signaling
phyp04530
Tight junction
phyp04810
Regulation of actin cytoskeleton
phyp05100
Bacterial invasion of epithelial cells
phyp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113545499
04519 Cadherin signaling
113545499
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113545499
09144 Cellular community - eukaryotes
04530 Tight junction
113545499
09142 Cell motility
04810 Regulation of actin cytoskeleton
113545499
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
113545499
05100 Bacterial invasion of epithelial cells
113545499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113545499
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
phyp04812
]
113545499
04147 Exosome [BR:
phyp04147
]
113545499
Membrane trafficking [BR:
phyp04131
]
Others
Actin-binding proteins
Arp2/3 complex
113545499
Cytoskeleton proteins [BR:
phyp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
113545499
Exosome [BR:
phyp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113545499
Exosomal proteins of other body fluids (saliva and urine)
113545499
Exosomal proteins of bladder cancer cells
113545499
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
MreB_Mbl
FtsA
Robl_LC7
Motif
Other DBs
NCBI-GeneID:
113545499
NCBI-ProteinID:
XP_026800690
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MAVPLPPCVIDYGTGYTKIGYAGNTEPQFIMPSCIAIRETAGVGDQAQRRLVKGVDDLDF
FIGDEALDKPNYATKWPIRHGIIEDWDLMEKFMEQVIFKYLRAEPEDHNFLVTEPPLNTP
ENREYLAEIMFETFNIPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPV
AEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAVKERYCYICPDIVK
EFTKYDTDPGKWIKKYKGINAISKNEFLIDVGYERFLGPEIFFHPEFANPDFVEPISDVV
DEVIQSCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKP
KPIEVQVITHHMQRYAVWFGGSMLASTPEFSQVCHTKKDYEEHGPSICRHNPVFGIMS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcctctaccaccatgtgtcatcgactatgggacaggctacacgaagatcggc
tatgctgggaacactgagccgcagtttatcatgccatcctgcattgcgatcagagagaca
gctggagttggagaccaggctcagagacgcctcgtgaagggagtggatgatctggatttc
ttcattggggacgaagcgctcgacaagcccaactacgcaaccaagtggcccatcaggcat
ggtatcatcgaggactgggatctgatggagaagtttatggagcaggttatttttaaatac
ctccgagctgagccggaagatcacaacttccttgtgacagagcctcctctgaacacacca
gagaacagagaatatttagccgagatcatgtttgaaacgttcaacattccaggcctttac
atcgccgtccaggctgttctggctctagcggcctcatggacgtccaggcaggtcggagag
cgaactctaacagggatcgtcattgacagtggagatggagtcacgcatgtgatacctgtg
gcagagggctacgtgattgggagctgtataaagcacatccctatagcaggccgagacatc
acctacttcatccagcagctcctcagagagagagaggtcgggattcctcctgaacagtct
ctggagaccgcaaaggcagtcaaggagaggtactgctacatctgcccagacattgtgaaa
gagttcacaaagtacgacacagacccagggaagtggataaagaaatataaaggcatcaat
gccatcagcaaaaatgagtttctcatagacgtgggatatgaacgctttcttggaccagag
attttcttccatccggagtttgccaacccggacttcgtggaacccatttcagatgttgta
gatgaggtcattcaaagctgtccaatagacgtgagaagacctctttacaagaatatagtg
ctctctggaggatccactatgttcagggactttggtcgacggctacaaagggatctgaag
cgtgtagttgatgccagactccgactcagtgaggagctcagtggaggtcggataaagcct
aaaccaatcgaggtacaagtgatcacacatcatatgcagagatatgctgtctggtttgga
gggtccatgttggcctctacgcccgagttctcccaagtgtgtcacacaaagaaagactac
gaagagcacggtcccagtatctgtcgccataatccagtgttcggtatcatgtcctaa
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