Pangasianodon hypophthalmus (striped catfish): 113545526
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Entry
113545526 CDS
T05759
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like protein 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113545526 (tbpl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113545526 (tbpl1)
03021 Transcription machinery [BR:
phyp03021
]
113545526 (tbpl1)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
113545526 (tbpl1)
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113545526 (tbpl1)
RNA polymerase III system
TFIIIB
113545526 (tbpl1)
RNA polymerase I system
SL1/TIF-1B
113545526 (tbpl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
P22_Gp10_C
Motif
Other DBs
NCBI-GeneID:
113545526
NCBI-ProteinID:
XP_026800706
LinkDB
All DBs
Position
Unknown
AA seq
186 aa
AA seq
DB search
MEPSNDVALDIIITNVVSVFRTRCHLNLRTIGLEGNNVIYRPEVGKVLMKLRKPRITASI
WSSGKIICTGATSEDEAKLGARRLARCLQKIGFKVRFSDFKIVNVLAVCSMPFQIRLIEF
TKNNRPIASYEPELHPAASYRIKTLRTTVQVFSTGNITVTGPNVQSVASAVEQIYPLLFE
CQKKLA
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgagtaacgatgtggcgctggacattatcatcacaaacgtggtttccgtcttc
aggaccaggtgtcatttaaacctgcgcacgattggcctggaagggaacaacgtcatctac
agaccggaagtggggaaagtactgatgaagctccgcaaacctcgcatcactgcctccata
tggtcatcagggaaaatcatttgcactggagcaacaagtgaggacgaggctaaactgggt
gccaggaggttagcccgctgcctccagaagataggattcaaggtcaggttttcagatttt
aagattgtaaacgtcctggcagtgtgctccatgccttttcagatccgtctcattgagttc
accaagaacaaccgtcccatagccagctatgagcctgagcttcatccagctgcttcatac
agaattaaaacccttaggaccacagtgcaagtgttctccacaggcaacatcacagttaca
ggaccaaatgttcagagtgttgcctcagctgtggaacagatatatcctctactgttcgag
tgtcagaaaaaactggcataa
DBGET
integrated database retrieval system
