Pangasianodon hypophthalmus (striped catfish): 113545540
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Entry
113545540 CDS
T05759
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
phyp03041
]
113545540 (dhx35)
Enzymes [BR:
phyp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113545540 (dhx35)
Spliceosome [BR:
phyp03041
]
Complex C
Other components
Complex C specific factors
113545540 (dhx35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
ABC_tran
AAA_22
Cas3-like_C_2
AAA_19
AAA_29
Motif
Other DBs
NCBI-GeneID:
113545540
NCBI-ProteinID:
XP_026800732
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MAAPHSIMKFWKPGAEAPGVSEERELNTEPGGAAVIYNPHSTLSVEKQRQKLPVFKHRNN
ILYMVECFQTVVILGETGSGKSTQIPQYLLEAGWAAEGKVIGVTQPRRVAATSVATRVAE
ERGAFLGHEVGYTIRFDDCSDPHATRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHERT
LYTDIAIGLLKKIQRKRRDLRLIVASATLDAKKFYDFFNLNETGDPSKDTCGILTVEGRT
FPVDIFYTVSPVPDYVKATVETVLKIHEAEDDGDVLAFLTGQEEVEKVVSMLQDQARSLS
RHGMKKHLRVLPMYAGLPYSEQLKVFERLPPTVRKVVVATNIAETSITINGIVFVIDCAF
VKLRCYNPLTAIESLVVTPISKASASQRAGRGGRNRPGKCFRLYTEEDFEKLPESTVPEM
QRSNLAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLFALGGLDQYGRLTEPAGVR
MAEFPLSPMFAKMLLESGNFGCSKEIITIAAMMQIQNVFVVPSNQKKAAAREHRKFAVAE
GDHLTMLNVYEAFVKHQKSSQWCQEHFLNYKGLLRAMTVREQLRRLLNKFKVPRTSSEGD
PDVILRCIVSGFFANAARLHHSGSYRTLRDDRELHIHPNSVLYGEKPPKWVVFNEVVQTS
KYYMRDVTAVESSWLVELAPHFYKQATHGSLGSKRSKVF
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccccactccatcatgaaattctggaaacccggggccgaggcgccgggagtg
agtgaggagagggagctgaacacggagccgggtggcgccgctgtcatctacaaccctcac
agcaccctgtctgtggagaaacagaggcagaagctgcctgtctttaagcacaggaacaac
atcctgtacatggtggaatgctttcagaccgtagtgatcctgggagagaccggctcgggg
aagagcacccagattcctcagtacctcctggaggccggatgggctgcagaggggaaggta
atcggtgtgactcagcctcggagagtagctgctacatcggtggccactcgggtagcagag
gaacgtggagcgtttttggggcatgaggtgggatataccatccgctttgacgactgctca
gatcctcatgccacccgtataaagttcctcacagatgggatgctggtcagggagatgatg
gccgacccgctgctgaaaaagtacagtgtcctcatgttggacgaggcccatgaaaggact
ctctacaccgacattgccatcggccttctcaagaagattcagaggaagcggagagacctg
cgactaatcgtcgcgtccgctacactggatgccaagaaattttatgactttttcaacctg
aatgaaacgggagacccgagcaaggacacgtgtgggatcctgactgtcgagggccgcact
ttccccgtggatattttctacacagtcagtccagttccagattacgtaaaggccaccgtg
gaaaccgtgctgaagattcacgaagccgaggacgacggagacgtgctggcgttcctcact
ggacaggaggaggtggagaaggtggtgtccatgctgcaggatcaggctcgctctctgtct
cgccacggtatgaagaaacatctgcgcgtcctccccatgtacgcaggcctgccttactcc
gagcagctgaaagtgtttgaacggttgccacctactgtccgaaaggtggtggtcgccact
aacatcgccgagacgtccatcaccatcaacggcatcgtgtttgtgatcgactgtgcgttt
gtcaagctgcggtgctacaaccccctcacagccatcgagtctctggtggtgacgcccatc
tccaaagcctcagcgtctcagagagcaggaagaggcgggcgcaaccggcccgggaaatgt
ttccgcctttacacagaggaagacttcgagaagcttccggagagcaccgtgcccgagatg
cagcgcagtaatttggctccggtcatccttcagctcaaagctctgggcatcgacaacgtt
ctgcgcttcagcttcctgtctccgcccccggctcagaccatggtgcaggccttggagttg
ctcttcgctctcggtggtctggatcagtacgggcgtctgaccgagccggcgggggtccgc
atggccgagttccccctcagccccatgttcgctaagatgctgctcgagtcgggaaacttc
ggctgctccaaagagatcatcaccatcgccgccatgatgcagatccagaacgtgttcgtg
gtgccgtccaatcagaagaaagcagctgcgcgtgagcacaggaagttcgctgtggctgaa
ggtgatcatctgaccatgctgaatgtctacgaggctttcgtgaagcatcagaagagttcg
cagtggtgccaggagcacttcctgaactataagggtctgctgcgtgccatgacggtccga
gagcagctccgtcgcctgctgaacaagttcaaggttcctcgaacctccagtgaaggcgac
ccagatgtgattctgaggtgcatcgtgtcaggattcttcgctaacgcggctcgcttgcat
cactccggatcctacaggactttacgggatgaccgggagcttcacattcatcccaactct
gtgctttacggggagaaacctccgaaatgggtggtctttaatgaggtggttcagacctcc
aagtactacatgagagacgtgactgcggtggaatcgtcctggctggtggaactggcacct
catttttataaacaggccacgcacggctctctgggaagcaaacggtccaaagtcttctga
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integrated database retrieval system
