Pangasianodon hypophthalmus (striped catfish): 113545590
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Entry
113545590 CDS
T05759
Name
(RefSeq) neural cell adhesion molecule L1.1-like isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04514
Cell adhesion molecule (CAM) interaction
phyp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
113545590
04517 IgSF CAM signaling
113545590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
phyp04515
]
113545590
04090 CD molecules [BR:
phyp04090
]
113545590
04091 Lectins [BR:
phyp04091
]
113545590
Cell adhesion molecules [BR:
phyp04515
]
Immunoglobulin superfamily
L1 family
113545590
CD molecules [BR:
phyp04090
]
Proteins
113545590
Lectins [BR:
phyp04091
]
I-type lectins (Siglecs)
113545590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
V-set_CD47
Pur_ac_phosph_N
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
113545590
NCBI-ProteinID:
XP_026800793
LinkDB
All DBs
Position
Unknown
AA seq
1292 aa
AA seq
DB search
MSRAQCHSSATGGKCRAAQLLFLLLWFGKTFGSIQIPKEYNISDLKEPPLIRQQSQSYTA
FYVDDVSLRCEASGNPKPTYRWEKDGELFMEEMNGSGILTADQSEELKFYQGKYRCYASN
ELGTAESDLIHLITEPIPVSVKEKKVVKIANEGDSVVLQCNIPKSSVEAYIHWMDKKLMH
IKQSDRITIGLNGNLYFANVLTSNTRDDYTCYTQYVEARTILSTEPVSLIVNPSNEVVNR
PPGFHQPEKAQTHYFALRGQTLILECIPHGLPTPIVQWERKDAPLSSSQATKERFDRWLE
FASITESDDGEYTCTASNIMGQITRSYTVTVEAAPYWTKQPESALYSPGEMVRLDCHAEG
IPTPHIAWKINGVPLSETAPEPRRSVKGGTLILTDVQFADTAVYQCEASNKHGTALLNTY
IHVVELPPQILTDDSRVYKVTEGSMASLSCSTFGSPRPQISWESEEFGPVLSNPRMSQMA
NGTLHITNVSHEDAGTYLCSVTHTNVSITALLVVLNKTRIVSPLHDHRILSGRSLVWPCR
YEVDARLSKPLIQWRKDGQKITTLPPDDKYTVFENGSLRISDIHAEDAGHYTCEIITRLD
FDMTTGSLTVIDKPEPPQSLKLDEKESRSVTLSWSPGYDNNSPVLEFVIEMREDLHLEAA
SWKELKRVPAEIHHLEISLLPFCTYHFRVAAVNEIGASGFSDPSDSYTTPAAEPDMTPAN
VRSESTNPDSMIITWEELEPRHFNGPGFGYKVFWRDAAGLEEPWQSAFVSHPPFIVNKTG
TFVPFEIKVQAANGVGDGPSPEAAIGYSGEDLPMKAPTQIIVNLVNATAASVVWDPVSRE
SVRGHLLGYRIYLRRLGSRGDHSHRGKEKRALATVREMVRDMERAMESEEERQVIVVKGK
DEAIVSGLDFYSNYELSITAFNSKGEGPLSSPTYFSTSEGAPGRPSNFRFESPSETELML
FWKKPHKTNGILRGYIIMYQELVEKGLSTLQTVKIEDPRATQYKVDKLDSKNYYIFSLKA
FTDAGEGETIHVNATTLLDGVPPTSINTTVGETTVNLSWVPGERYRNIRFTIHYQGSSGQ
WEESEQVNLTQAFYQLQGLRADTKYQLKIRYNNETHWTHTLRTTRPVLPVVQNSFATQGW
FIGLISAVVLLLLILLILCFVKKSKGGKYSVKDKEEGQMDSDAKPMKDEGFGEYRSLESS
DNDEKRSFSQRSLCPDLKRESDDSLVEYGDSVDIQFNEDGSFIGQYSGRRDTQPFTHGEH
ESSGVPSPTNPNMHPPPSGSFPTSVTGVFGGN
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcgcacagtgtcactcatcggccactggagggaaatgcagagcggcacagctg
ctgtttcttcttctctggttcgggaaaacttttggatccattcagatccctaaagaatat
aacatttctgacctgaaagagcctccgctgatcagacaacagtcgcagtcgtacacagcc
ttctacgtagacgacgtctctctgcgatgtgaagctagcggcaaccccaaacccacttat
cgatgggagaaggatggtgaactgttcatggaggaaatgaacggttcgggaattcttaca
gctgaccaaagtgaagagctgaaattttaccaggggaaatatcgatgctacgcgtcaaac
gagctcggcactgctgaatcagacttgatacacctcatcactgagcccattccagtctca
gtgaaagagaagaaagtggtgaagatcgctaacgagggtgacagtgtggtgctacaatgc
aatattccaaagagctcagtggaggcttacatccactggatggacaagaaattgatgcat
attaagcaaagtgaccgcatcaccattggcctgaatggtaatctgtacttcgccaatgtg
ctgaccagcaacaccagagacgattacacctgctacacccagtacgtcgaagccagaacc
attttatccacagagccagtttctctcattgttaatccctccaacgaggtagtgaacaga
ccacccggtttccaccaacctgagaaagcacagacccattattttgccctccgaggccag
actctcatcctggagtgtattccacatggcctgccgactcccatagtccaatgggaaagg
aaagacgctccgctttcctccagtcaagcaactaaggagcgcttcgaccggtggctggag
tttgcttccatcacggagagtgatgatggagagtacacctgcaccgcctctaatataatg
ggacaaataacacgctcgtacacagtcaccgtggaggccgctccttattggacgaagcag
cctgagagtgcgctgtactcaccgggagagatggtcagactggactgccacgctgagggc
attcctacaccacacatagcatggaagattaatggagtgcccctctcagagacggctcct
gagccgaggcgcagtgtaaaaggcgggactttaatcctgactgatgttcagttcgctgac
acggccgtctatcagtgtgaggcctccaataaacacggcaccgccctccttaacacctac
atccacgtcgtcgaactgccccctcagattctgactgatgacagtcgagtgtataaggtg
acggagggatccatggcgtctctcagctgcagtactttcggttctccacgaccccaaatc
agctgggagagtgaggagttcggtccggttctgtccaacccgaggatgtcccagatggcc
aatggcacgttacacatcaccaacgtgagccacgaggacgcaggaacgtacctgtgttca
gtcacacacaccaatgtgtccattactgcactgctggtggtgctgaacaagacccggatc
gtgtcccctcttcatgaccaccggatattaagtggacgctcgttggtttggccgtgcagg
tacgaggtggacgctcgactctctaagcccttaatccagtggaggaaagatggacaaaaa
atcacaacattacctccagatgacaaatacacagtttttgaaaatggatcactgaggatc
tctgacatccacgctgaagatgctggacactacacgtgtgagatcatcaccagattggat
ttcgatatgaccactggatcactgactgtgattgataagcctgaacctcctcagtcactg
aagctggatgagaaggagagtcgcagcgtcactctgtcctggagccccggatacgacaac
aacagccctgtgctcgagtttgtgattgagatgcgagaagatctgcacttagaagcagcg
agctggaaggagctgaagcgtgttcctgctgaaatccatcacctggagatttctctgctt
cccttctgcacgtaccacttcagagtggcggcggttaatgagatcggcgcgagtggcttc
agcgatccgtctgactcgtacaccacacctgctgcagagcctgacatgaccccggcgaac
gtgaggagtgaatctactaatccagacagcatgatcatcacatgggaggagctggagccg
aggcactttaatggcccaggtttcgggtataaagtgttttggcgtgacgcagccggcctt
gaggagccctggcagtctgcgtttgtttctcatcctccatttatagtcaacaaaacaggt
accttcgtgcccttcgagatcaaagtgcaggcggcgaacggcgtcggcgacggaccgagt
ccagaggctgccattggctactccggagaagacctccccatgaaggccccgactcaaata
atagtgaatctggttaacgctacagccgcgtcagtcgtgtgggatccagtcagtagagag
tctgtgcgtggacatcttcttggctacaggatctacctgaggaggctgggttccagagga
gaccattcacacagagggaaagagaagcgagcgctagctacggtgagagagatggtgcga
gacatggagcgagcgatggagagtgaggaggaaagacaagtgatcgttgttaagggaaaa
gacgaggcgatcgtgagtggtctggacttctactccaattatgagctgtccatcacagcc
ttcaacagcaaaggggaggggcctctgtctagtcccacctacttcagcacatctgaggga
gctcctggccgtccatcaaacttcagatttgagagtccatcggagaccgagctgatgctc
ttctggaaaaaaccccacaaaactaatgggatcctgagaggatacatcataatgtaccaa
gagcttgtggagaaaggtctcagcacgctacagacggtgaagattgaagatccgagagca
acgcagtacaaagtcgacaaactggactcgaaaaattactacattttctccctgaaagct
tttactgatgctggagaaggagaaaccatccatgttaatgccaccaccttgctcgatgga
gttccaccaacttccataaacacaacagttggagaaacgactgtgaatctgagctgggtt
ccaggagaacgataccgaaacatcaggtttaccattcattaccaggggagcagcggtcaa
tgggaggaatcggagcaggtgaatttgacgcaggccttttatcagctgcagggactgaga
gcagacacaaaataccaactcaaaattcgctacaacaacgagacacactggacacacacc
ctgcggactacaagaccagtgttacccgtggtgcagaacagctttgccactcagggctgg
ttcatcggcctcatcagcgccgtggtgctgctgctgctaatcctgctcatcctctgcttt
gtcaaaaagagcaaaggaggaaaatattcagtgaaggataaagaggaaggacagatggac
tctgatgcgaaacccatgaaggatgaagggtttggagagtacagatccctcgagagcagc
gacaatgacgagaagcgttcgttcagccagcgctcgctgtgtcccgatctgaaacgcgag
agtgacgacagtctggtggaatacggagacagcgtggacatccagttcaacgaggacggc
tcgttcatcgggcagtacagcggccgcagagacacgcaaccattcacacatggagagcat
gagagctcaggggtcccgtccccaaccaaccccaacatgcaccctccacccagcggcagc
ttccccacctccgtcaccggcgtcttcggggggaactga
DBGET
integrated database retrieval system
