Pangasianodon hypophthalmus (striped catfish): 113545749
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Entry
113545749 CDS
T05759
Symbol
nrxn1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113545749 (nrxn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
phyp04131
]
113545749 (nrxn1)
Membrane trafficking [BR:
phyp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
113545749 (nrxn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Med13_C
hEGF
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
113545749
NCBI-ProteinID:
XP_026801059
LinkDB
All DBs
Position
Unknown
AA seq
1498 aa
AA seq
DB search
MMLRLCPGARLLWVGLFVCTLVDASASLKFSGAEGQWMAFPMWNACCESEMSFNMKTKSS
RGLLVYFDDEGFCDFLELLMNNGKLSLRFSIFCAEPVAVLSDVLVNDSQWHAVMVKRNFQ
NTTLIVDNEVKWVEVKSKRRDMTVFSHLFLGGIPPELRSVALRLTSNAVKDQVPFEGWIT
DLKVNDSVPVILNSAGVDSDACDDDNVCFNGGVCSVIDNEPTCNCSETGFQGKDCTEEDN
RAEGLAHLMMGDQGKTKGKEEYVATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGL
MLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNDWHDVKVTRNLRQHS
GIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKE
VVYKNNDVRLELSKLALQGDHKMKIHGVVAFKCENVATLDPITFETPEAFITLHKWNAKK
TGSISFDFRTTEPNGLLLFSHGRPKQQTKEAKSPITLKVDFFAIEMLDGHLYLLLDMGSG
TTKTRAVNKKVNDGEWYHVDFQRDGRSGTISVNTVRTPYQAPGESEILDLDDHLYLGGLP
ENRAGLVFPTEVWTALLNYGFVGCVRDLFVDGQSKDVRRMAEAQKAVGVKPSCSKEAPKQ
CLSNPCQNNGICREGWNRYVCDCAATGFLGRSCERDATILSYDGSKFMKIHLPMAMHTEA
EDITLRFRSQRAYGVLMATTSRDSADTLRLELETGRVRLTINLDCFRINCTSSKGPETLF
IGQNLNDNEWHTVRVMRRGKSLQLAVDELQPVEGEIPGDHTQLEFHNIETGIITEKRYLP
NAPSNFIGHLQSLVFNGMAYIDLCKNGDIDYCELNAMIGFKNIIADPVTFKSRSSYVSLR
TLQAYYTMHLFFQFKTTSPDGLILYNSGDGNDFIVVELVKGYLHYVADLGNGAHLIKGNS
NKPLNDNHWHNVMISRDSNNLHTVKIDTKVTTQTTIGARNLDLKGDLFIGGVAKEMYKEL
PKLVHAQEGFQGCLASMDLNGRLPDLISDALTCVGQIERGCEGPSTTCQEDSCANQGVCL
QQWEGFSCDCSMTSFGGHQCNDAGTTYIFGREGGKITYTWPPNDRPSTRADRLALGFSTQ
LKDALLIRVDSSSGLGDYLKLHIEKGHVAVIFNVGTDDINIEEKSKFVNDGKYHVVKFTR
SGGNATLQVDDLPVIERYPTGNIDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQ
TTIQIGGWERDRSRAFQGQMSGLYYNGLKVFNMAVEGNPNVRVEGSVRLVGEAPSSSSSS
SSSSSSSSITPQSNASTSIMETTTTTTSSTTTASSRRVKQTTPREAQQTTDDLLVASAEC
PSDDEDIDPCEPSSGGLASPTGPGLKGYPDPVEVVRESSSTTGMVVGIVAAAALCILILL
YAMYKYRNRDEGSYRVDESRNYISNSAQSNGTVLKEKPANVAKSTTKTKKNKDKEYYV
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgcggttgtgtcccggcgctcgtctgctctgggtcggactctttgtgtgcacc
ctggtggacgccagcgctagcctgaagttctccggtgctgagggccagtggatggcattc
cccatgtggaacgcctgctgtgagagcgagatgagcttcaacatgaaaaccaagagctcc
cgcggactcctggtgtacttcgacgacgagggcttctgcgatttcctcgagctgctcatg
aacaacggcaagctcagcctccgcttctcgatcttctgcgccgagccggtcgccgtgctc
tcggacgtgctggtcaacgacagccaatggcacgccgtcatggtaaagaggaacttccag
aacaccacgctcatcgtggacaacgaggtcaagtgggtggaggtgaaatccaagagacgg
gacatgaccgtgttcagtcacctgttcttaggagggataccgccggagctacggtccgtg
gcgctacggctgacgtcaaacgccgtcaaggaccaagttccctttgaaggctggataaca
gacttgaaagtcaacgactcggtgcctgttattctgaacagcgcaggagtggacagtgac
gcgtgcgacgacgataacgtgtgcttcaatggaggagtttgcagcgtcatcgacaacgaa
cccacatgcaactgctccgagacgggatttcagggaaaagactgcaccgaagaagacaac
cgtgctgaaggtctggcacacctgatgatgggagaccaaggtaaaactaaagggaaagaa
gaatacgtggcgaccttcaaaggttccgaatacttctgctacgacctgtcacagaacccg
atacagagcagcagcgacgagatcacactatcattcaaaaccctgcagaggaacggactg
atgctgcacacgggcaaatcggccgactacgtcaacctggcgctgaaaaacggggcggtt
tcgcttgtcattaatttggggtccggggcctttgaagccctggtggagccggtcaatgga
aaatttaatgacaatgattggcatgatgtcaaagtaacaaggaatctccgtcagcattca
ggcattggacacgctatggttacgatatccgtggatggaattcttaccaccacaggatac
acgcaggaggactacaccatgctaggctcggacgactttttctatgttggaggaagccct
agcacggccgacctgcccggatcgcccgttagcaacaacttcatgggctgcttgaaggag
gtggtttacaaaaacaatgatgttcggctggagctgtccaagctggccttgcagggtgac
cacaagatgaagatccatggtgtggtggccttcaaatgtgaaaatgtagccactctagat
ccaatcacctttgaaacaccagaagccttcatcacgttacataagtggaatgctaagaag
actggctccatatcctttgacttccgcactactgaaccgaacgggcttcttctgttcagc
cacgggaggccaaaacagcagaccaaggaggcaaagagccccatcactcttaaagtggac
ttctttgccatcgagatgctggacggtcatttgtacctgctgctggacatgggctcgggc
accaccaaaacacgagctgtcaacaaaaaggtgaatgatggggagtggtaccacgtggac
ttccagagggatggaaggtcaggtacgatatcggtaaacacggtgcgcacgccctaccag
gccccaggtgagagcgagatcctcgacctggacgatcacctgtacctgggtggtcttccc
gagaaccgagcaggtctggtgtttcccaccgaggtgtggacggcgctgctgaattacggc
tttgtgggctgcgtacgcgacctcttcgtcgacggccagagcaaagatgttcggcgcatg
gctgaggcccagaaagcagtaggggtgaagccgtcctgctccaaggaagcacctaagcag
tgcctgagcaacccctgtcagaacaacggcatctgccgagagggatggaatcgatacgta
tgcgactgcgccgctaccgggttcctgggacgttcttgcgagagagacgccaccatccta
agctatgatggcagtaagttcatgaaaatccatctcccgatggccatgcacaccgaggcc
gaggacatcacgctcaggttcagatcacaaagggcctacggcgtcctgatggccaccaca
tccagagactctgctgacacgctacgactggagctggagaccggacgagtccgcctgact
attaacctagactgtttcaggattaactgtacctccagtaaagggcccgagacgctcttc
atcggacagaacctgaatgataacgagtggcacacggtccgagtcatgaggagagggaag
agtctgcagctggctgtggatgagttacagcctgtggaaggtgagatcccgggtgaccat
acccagctggagttccacaacatcgagacagggatcatcacggagaagcgctacctcccc
aatgcgccctccaacttcatcggccacctccagagcctggtgttcaacggcatggcctac
atcgacctgtgcaagaacggagacatcgactactgtgagctgaacgccatgatcggcttc
aagaacatcatcgccgaccccgtgaccttcaagtcacgctcgagctacgtgtctctcaga
actctgcaggcctactacaccatgcacctgttcttccagtttaagaccacgtccccggac
ggcctcatcctgtacaacagcggagacggcaacgacttcatcgtcgtggagctcgtcaag
ggctacctgcactacgtagcagacctgggaaacggtgctcacctcattaaaggaaactcc
aacaagcctctgaatgataaccactggcacaacgtcatgatctccagagacagcaacaac
ctgcacacggtcaagattgacaccaaggtcaccacgcagaccaccatcggagccagaaac
ctcgacctgaagggagatctgttcatcgggggcgtggctaaagagatgtacaaagagctt
cccaaactggttcatgcacaagagggatttcagggctgtctggcctcgatggacctgaac
ggccgtctgccggacctcatctccgacgctctcacctgcgtggggcaaatcgagaggggc
tgcgaaggccccagcaccacctgtcaggaggactcgtgtgctaatcagggtgtgtgtctg
cagcagtgggaaggcttcagctgtgactgcagcatgacgtcgtttggaggacatcagtgc
aacgatgcgggaacgacgtacatattcgggcgtgaaggaggtaagatcacgtacacgtgg
ccgcccaacgacaggccgagcaccagagctgacagactggcactgggcttcagcacccag
cttaaagacgccctgctcatcagagtggacagctcatccggactgggagactatctcaaa
ctgcacattgaaaagggccacgtggccgtgatcttcaacgtgggcacggacgacatcaac
atcgaggagaagtccaagttcgtgaacgatggcaagtaccacgtggtgaagttcaccagg
agcgggggtaatgccacgctgcaggtggatgacctgccagtcattgagcgctaccccaca
ggcaacattgataacgaacgactggcgatcgctaggcagcgaatcccatatcgactcggt
cgagtagttgacgaatggctactcgacaaaggtcgacagctcaccatttttaacagccag
actacaatccagatcggaggctgggagcgagaccggagtcgcgccttccaaggccagatg
tcgggcctctattacaatgggctcaaagtgttcaacatggccgtcgagggcaacccaaac
gttcgcgtcgagggcagcgtgaggctggtgggcgaagcgccttcctcttcctcctcctct
tcttcctcttcttcttcctcttctatcacgcctcagtccaacgcctccacctccatcatg
gagaccacaaccaccaccaccagcagcaccaccacagcctccagccgccgagtcaagcag
accacgcccagagaggcgcagcagacgacggatgacctgttggtggcgtctgccgagtgt
ccgagcgatgacgaggatatcgacccgtgtgagccgagctcaggtgggttagcaagccca
acagggccgggtctgaaggggtaccccgacccggtggaggtggtccgcgagtccagcagc
accacgggtatggtggtgggcatcgtggcggcagccgctctgtgcatcctcattcttctt
tatgccatgtacaaataccgcaaccgagacgagggctcgtatcgcgtggacgagagccgc
aactacatcagcaactcagcgcagtccaacggcaccgtcctaaaggagaaaccagccaac
gttgccaagagcaccaccaagaccaagaaaaacaaggacaaggagtactatgtttga
DBGET
integrated database retrieval system
