Pangasianodon hypophthalmus (striped catfish): 113545759
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Entry
113545759 CDS
T05759
Name
(RefSeq) LIM domain-binding protein 3-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113545759
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
113545759
Domain-containing proteins not elsewhere classified [BR:
phyp04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
113545759
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
PDZ_2
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
113545759
NCBI-ProteinID:
XP_026801110
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MSTYTVTLAGPAPWGFRLQGGKDFNMPLTISRITPGSKAASGNLTQGDIIVAIDGVSTEG
MTHLEAQNKIKSANFNLALTMQRSKRPIHVSMTAPRIDTSIPVIPHQKVITNMPINNEYV
PSFNPIALKDTALSTNKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQSQARGA
ELSGDEALSGSPLSSLPVKERVIDSASPVYQAVNSSGEVLEPAEWARRAAHMQSKSFRLL
AHLTGTEYMQDPDEEALTRASTPVQHAAVSTSTAPVALSASAALPSQLAAELQIANQVPE
QTAEPASVGSSHVSFVSPPEPQAISQADPVAHEAHEAPVLPPEGPRHLSLAASTISTALT
AQSRNHVYKKGSPPTSALEALSITPYFRSRALPKRKQSGKAKKVSFTTQSSSSYRSQYQT
SAISGQYAQQPPIQQAPHAQQPLHIQTTPHSQQAPPMQQSSIHIPVGPSPTKVVSTATIV
PTAYPTAPAYEWQGERAQRGVHFGEAPVQAPAPALAPAPPPAPVHIPPPAPVYVPPPAPV
HLPAPTPPAPAPGPVQSSSRPPWVMDDTFAQKFDPSKTTTTSVKVQPLPTAAPPPPAYIP
NPSPAPAAPSPASAPFIPAPFPPVARGVAQRAERFAASNRTPMCAFCNSIIRGPFLVALG
RSWHPEEFNCHYCHTSLADVSFVEEQNNVYCENCYREFFAPTCARCNTKIMGEVMHALRQ
TWHTTCFVCAACGKPFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDFPVEAGDKFIEALG
HTWHDTCFVCTVCHINLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgagcacttatactgtgacacttgctggacctgcgccatggggcttccgcttgcaagga
ggcaaagacttcaacatgcccctcaccatttcccggatcactcctgggagcaaagcagct
tcaggtaacctgacccagggtgacatcatcgtagccattgacggtgtcagcactgagggc
atgactcacctggaggctcagaacaagatcaagagtgccaacttcaacctggccctcacc
atgcagaggtcaaagcgcccaatccatgtgtccatgactgcaccaagaatcgacacttca
attcctgtcatccctcaccagaaggttattaccaacatgcctatcaacaacgagtacgtg
cccagtttcaaccccattgccctgaaggacacagctctttccaccaacaagcccattgaa
gtgaaggggccgggaggcaaggccactatcatccatgcccagtacaacactccgattagc
atgtactcgcaggatgccatcatggacgcaatcgctggtcagtctcaggccagaggggct
gaattgtccggcgatgaggctctctctggctctcccctttctagtctgcctgttaaagag
cgtgttatagacagtgcttccccagtgtatcaggctgtgaattccagcggagaagtgcta
gagcctgctgagtgggcacggagagccgcccacatgcagtccaagtccttccgcctcctc
gcccacctcaccggcactgaatacatgcaagacccagatgaggaagctcttacaagagcg
agtacgcctgtccagcatgctgcggtctccaccagcacagcccctgttgctctgtccgct
tctgcagctttgcccagtcagctcgccgctgagctgcagatagccaatcaggtgcctgag
cagactgctgaaccagcctctgtaggctctagccatgtcagctttgtgtcaccccctgag
ccacaggctatatctcaagctgaccctgtggctcacgaggcccatgaggcccctgttctc
ccccctgaggggccacgccacctgtcgcttgctgcctcaaccatttcaactgctttgact
gctcaatctagaaaccatgtgtataagaaagggtcgccacccacctctgcgctggaggcc
ctgtcaatcactccatacttccgcagcagagctttgcccaaacgcaagcaatcaggaaaa
gcaaagaaagtgagcttcaccacgcagtcctcatccagttacagatcacagtaccaaacc
tccgccatcagcggccagtatgcacagcagccacctatacagcaagctccacatgctcaa
cagcctcttcatattcaaacaactccacacagtcaacaggccccgcccatgcagcagagc
tccatccacatccctgtaggtccgtctccaactaaagtggtcagcaccgccaccattgtg
cctacagcttatcctactgctccagcatacgagtggcagggggagagggcacagcgtggt
gtccatttcggagaagcccccgttcaagcccctgctcccgctcttgctccagccccacct
cctgccccagttcacattcctcctcctgccccagtttatgtccctcctcctgccccagtt
catttgcctgctcccacccctcctgctcctgcccccggccccgtccaatcctccagcaga
cccccatgggtcatggatgacacttttgcccaaaagtttgatcccagcaagaccaccacc
accagcgtcaaagtgcagcctcttcccactgcggccccaccgcctcctgcctacatcccc
aacccttctcctgcccctgctgcccccagccctgcctcagccccctttatccctgcccct
ttcccacctgtggctcgtggggtggcacagagagcagaacgctttgctgccagcaatagg
acaccaatgtgtgctttctgcaacagcatcatcagggggcccttccttgtggcactgggc
cgctcgtggcacccggaggagtttaactgccattactgccacacatctctggctgatgtc
agctttgtggaggagcagaataatgtttactgtgagaactgttacagagagttctttgcc
cctacctgtgcccgctgcaacactaagatcatgggagaagtgatgcatgctctgcggcag
acctggcacactacctgctttgtgtgtgctgcgtgtgggaaaccatttggaaatagcctc
tttcatatggaggatggagaaccttactgtgagaaagattacattgcgctcttcagcact
aagtgccatggctgtgatttcccagtggaggctggggacaagtttattgaggctcttggc
cacacatggcatgacacctgctttgtgtgtacggtttgccatataaatctggaaggccag
ccgttctattctaagaaggacaaacctttatgcaagaaacacgctcacgccatcaatgtg
taa
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