Pangasianodon hypophthalmus (striped catfish): 113545833
Help
Entry
113545833 CDS
T05759
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113545833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
phyp03021
]
113545833
03036 Chromosome and associated proteins [BR:
phyp03036
]
113545833
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113545833
Chromosome and associated proteins [BR:
phyp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
113545833
PBAF complex
113545833
GBAF(ncBAF) complex
113545833
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
SWIRM-assoc_2
Chromo
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
113545833
NCBI-ProteinID:
XP_026801258
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQEEEWVRPVMKRDKQMLLHWG
YWPDSYDTWISASEVEAVVEDPPIAEKPRKVDEQEDEAMETVGKEEDEGSASVKGEPVKG
SDLHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFM
IDTYRLNPQEYLTSTACRRNLAGDVCAIMRSGGENHSNEHSQHSHNADTNHSTVTTPTRT
TAQSQHRHEPQHSHDTESKDGASEEEEKQGENGKKEEEGGKEGETEREAEKTDSDAGDVE
KEKEGKEGSEDGQREGESDGERKAKVERDVGEGNLATAAASALAAAAVKAKHLAAVEERK
IKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAE
MRARQQHFQQIQHQHHSNQPGNQPSNAPPIPHQSAPNASAPPPAPSLTPAASTNASSEAP
PTSASHGSSPSNSQPGAVHDSGTALTGDSLHPSGPVTPAQ
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcgggccgaatgtgaaatatttcgaagcctctgatacc
gtgtctcagttcgacaatgtccgcgtgtggctcgggaagaattacaaaaagtatatccag
gaggaggagtgggttcgtcctgtgatgaagagagataaacagatgctgctgcactggggt
tactggcccgacagttatgatacgtggatctccgccagcgaagtcgaggccgtagtggag
gatccacccattgcagagaaacccagaaaggtagacgaacaggaggacgaggcaatggag
acggtgggaaaggaggaggatgaaggttctgccagcgtgaagggagaaccggtgaaaggt
tctgatctgcatgaggacaacgtgacagaacagacgcaccacatcatcattcccagctac
gctgcctggttcgactacaacagcgttcatgctatcgagcgcagagctctgcccgagttc
ttcaatggaaagaacaaatctaagacccctgagatttatcttgcttacaggaactttatg
atagatacatatcggctgaacccacaggagtatttgacctctacagcttgccgtagaaac
ctggcaggagatgtttgtgccatcatgaggtcaggaggagaaaatcacagcaacgaacac
agtcaacacagtcacaacgccgacacgaaccacagcacagtcacaacgccgacacgaacc
acagcacagtcacagcacagacacgaaccacagcacagtcacgacacagagagtaaagat
ggagcgagtgaggaggaggagaagcagggtgagaacgggaagaaagaagaagaaggaggt
aaagagggagagacagaacgcgaggcagagaagacggactcagacgcaggtgatgtagag
aaagagaaagaaggaaaagagggatcagaggatggacagagggaaggagagagtgatgga
gagaggaaagcgaaggtggagagagatgttggtgaggggaatctggccactgctgctgcc
tctgcgctcgccgccgccgcggttaaagccaagcacctggctgcggtggaggagaggaag
atcaagtctctagtggctctgctggtggagactcagatgaagaagctggagatcaaactg
aggcactttgaggagctggagaccatcatggaccgagagagagaggcgttggagtatcag
aggcagcagctcctggctgatcgtcaggcgttccacatggagcagctgaagtatgcggag
atgagagcacgccagcagcacttccagcagatacagcaccagcaccatagcaaccaaccc
ggcaaccagcccagcaacgccccgcccatcccccaccaatcagctcctaacgccagtgcc
ccgcctcctgcaccaagcctcactccagctgcctccaccaacgcctccagtgaagctccg
cccacctctgcctctcatggctcctcccccagcaactcacagcctggagcagtgcacgac
tccggcactgcactaacaggagattccctccatccctctggcccggtgacccctgcacag
tga
DBGET
integrated database retrieval system
